RNA–Protein interactions for RNA: ENST00000562882.5

CDH11-205, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-205ENST00000562882 NISCHQ9Y2I1 1504 aa30.32■■■□□ 2.44
CDH11-205ENST00000562882 CCDC180Q9P1Z9 1646 aa26.85■■□□□ 1.89
CDH11-205ENST00000562882 ABCC9O60706 1549 aa26.09■■□□□ 1.77
CDH11-205ENST00000562882 ZCCHC6Q5VYS8 1495 aaKnown RBP25.3■■□□□ 1.64
CDH11-205ENST00000562882 DCAF8L2P0C7V8 631 aa25.24■■□□□ 1.63
CDH11-205ENST00000562882 MYO15BQ96JP2 1530 aa25.23■■□□□ 1.63
CDH11-205ENST00000562882 NACADO15069 1562 aa25.22■■□□□ 1.63
CDH11-205ENST00000562882 RB1CC1Q8TDY2 1594 aa25.17■■□□□ 1.62
CDH11-205ENST00000562882 DCAF1Q9Y4B6 1507 aa25.14■■□□□ 1.62
CDH11-205ENST00000562882 UNC13AQ9UPW8 1703 aa24.62■■□□□ 1.53
CDH11-205ENST00000562882 BICRAQ9NZM4 1560 aa24.54■■□□□ 1.52
CDH11-205ENST00000562882 SCRIBQ14160 1630 aa24.43■■□□□ 1.5
CDH11-205ENST00000562882 PABPN1Q86U42 306 aaKnown RBP eCLIP24.38■■□□□ 1.49
CDH11-205ENST00000562882 SHROOM4Q9ULL8 1493 aa24.29■■□□□ 1.48
CDH11-205ENST00000562882 DNAJC5BQ9UF47 199 aa23.99■■□□□ 1.43
CDH11-205ENST00000562882 EIF4G1Q04637 1599 aaKnown RBP23.8■■□□□ 1.4
CDH11-205ENST00000562882 CC2D2AQ9P2K1 1620 aa23.65■■□□□ 1.38
CDH11-205ENST00000562882 CECR2Q9BXF3 1484 aa23.58■■□□□ 1.37
CDH11-205ENST00000562882 BAZ1AQ9NRL2 1556 aaPredicted RBP23.47■■□□□ 1.35
CDH11-205ENST00000562882 SMARCA4P51532 1647 aa23.44■■□□□ 1.34
CDH11-205ENST00000562882 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
CDH11-205ENST00000562882 NCAPD3P42695 1498 aa23.34■■□□□ 1.33
CDH11-205ENST00000562882 ATAD2BQ9ULI0 1458 aa23.33■■□□□ 1.33
CDH11-205ENST00000562882 PEG3Q9GZU2 1588 aa23.32■■□□□ 1.32
CDH11-205ENST00000562882 SMARCA2P51531 1590 aa23.25■■□□□ 1.31
CDH11-205ENST00000562882 RSF1Q96T23 1441 aaPredicted RBP23.24■■□□□ 1.31
CDH11-205ENST00000562882 HMGXB3Q12766 1538 aa23.2■■□□□ 1.3
CDH11-205ENST00000562882 WIZO95785 1651 aa23.1■■□□□ 1.29
CDH11-205ENST00000562882 BAZ1BQ9UIG0 1483 aaKnown RBP23.06■■□□□ 1.28
CDH11-205ENST00000562882 SUPT5HO00267 1087 aaKnown RBP22.89■■□□□ 1.25
CDH11-205ENST00000562882 TOP2AP11388 1531 aaKnown RBP22.88■■□□□ 1.25
CDH11-205ENST00000562882 NESP48681 1621 aa22.66■■□□□ 1.22
CDH11-205ENST00000562882 CCDC88BA6NC98 1476 aa22.65■■□□□ 1.22
CDH11-205ENST00000562882 LAMC3Q9Y6N6 1575 aa22.63■■□□□ 1.21
CDH11-205ENST00000562882 CADPSQ9ULU8 1353 aa22.61■■□□□ 1.21
CDH11-205ENST00000562882 CFTRP13569 1480 aa22.54■■□□□ 1.2
CDH11-205ENST00000562882 PDS5BQ9NTI5 1447 aa22.43■■□□□ 1.18
CDH11-205ENST00000562882 ERCC6Q03468 1493 aa22.4■■□□□ 1.18
CDH11-205ENST00000562882 KIF21AQ7Z4S6 1674 aa22.35■■□□□ 1.17
CDH11-205ENST00000562882 THOC2Q8NI27 1593 aaKnown RBP22.33■■□□□ 1.17
CDH11-205ENST00000562882 FANCD2Q9BXW9 1451 aa22.3■■□□□ 1.16
CDH11-205ENST00000562882 CUX2O14529 1486 aa22.28■■□□□ 1.16
CDH11-205ENST00000562882 PRDM2Q13029 1718 aa22.27■■□□□ 1.16
CDH11-205ENST00000562882 CEP164Q9UPV0 1460 aa22.23■■□□□ 1.15
CDH11-205ENST00000562882 MRC2Q9UBG0 1479 aa22.22■■□□□ 1.15
CDH11-205ENST00000562882 WDR62O43379 1518 aa22.2■■□□□ 1.14
CDH11-205ENST00000562882 URB2Q14146 1524 aaKnown RBP22.12■■□□□ 1.13
CDH11-205ENST00000562882 ABCC8Q09428 1581 aa22.01■■□□□ 1.11
CDH11-205ENST00000562882 TOPBP1Q92547 1522 aa21.98■■□□□ 1.11
CDH11-205ENST00000562882 DNMBPQ6XZF7 1577 aa21.95■■□□□ 1.11
CDH11-205ENST00000562882 CUX1P39880 1505 aa21.89■■□□□ 1.09
CDH11-205ENST00000562882 WRNQ14191 1432 aaPredicted RBP eCLIP21.89■■□□□ 1.09
CDH11-205ENST00000562882 POLA1P09884 1462 aaPredicted RBP21.82■■□□□ 1.08
CDH11-205ENST00000562882 IFT140Q96RY7 1462 aa21.81■■□□□ 1.08
CDH11-205ENST00000562882 TOP2BQ02880 1626 aa21.79■■□□□ 1.08
CDH11-205ENST00000562882 TARBP1Q13395 1621 aaKnown RBP21.78■■□□□ 1.08
CDH11-205ENST00000562882 SYNJ1O43426 1573 aa21.78■■□□□ 1.08
CDH11-205ENST00000562882 BIVM-ERCC5R4GMW8 1640 aa21.77■■□□□ 1.07
CDH11-205ENST00000562882 FGD5Q6ZNL6 1462 aa21.76■■□□□ 1.07
CDH11-205ENST00000562882 SOGA1O94964 1423 aa21.73■■□□□ 1.07
CDH11-205ENST00000562882 ZNF608Q9ULD9 1512 aaPredicted RBP21.71■■□□□ 1.07
CDH11-205ENST00000562882 RAD54L2Q9Y4B4 1467 aa21.69■■□□□ 1.06
CDH11-205ENST00000562882 TRIM41Q8WV44 630 aa21.64■■□□□ 1.05
CDH11-205ENST00000562882 WDR97A6NE52 1622 aa21.61■■□□□ 1.05
CDH11-205ENST00000562882 EIF4G3O43432 1585 aaKnown RBP21.6■■□□□ 1.05
CDH11-205ENST00000562882 ABCA10Q8WWZ4 1543 aa21.6■■□□□ 1.05
CDH11-205ENST00000562882 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.04
CDH11-205ENST00000562882 CHIC1Q5VXU3 224 aa21.57■■□□□ 1.04
CDH11-205ENST00000562882 TDRD9Q8NDG6 1382 aaKnown RBP21.55■■□□□ 1.04
CDH11-205ENST00000562882 ABCA5Q8WWZ7 1642 aa21.49■■□□□ 1.03
CDH11-205ENST00000562882 DNAJC5Q9H3Z4 198 aa21.48■■□□□ 1.03
CDH11-205ENST00000562882 GAPVD1Q14C86 1478 aa21.46■■□□□ 1.03
CDH11-205ENST00000562882 GRIN2BQ13224 1484 aa21.42■■□□□ 1.02
CDH11-205ENST00000562882 KIF27Q86VH2 1401 aa21.42■■□□□ 1.02
CDH11-205ENST00000562882 MAGI1Q96QZ7 1491 aaPredicted RBP21.38■■□□□ 1.01
CDH11-205ENST00000562882 SNAPC4Q5SXM2 1469 aa21.36■■□□□ 1.01
CDH11-205ENST00000562882 ERICH3Q5RHP9 1530 aa21.34■■□□□ 1.01
CDH11-205ENST00000562882 PBRM1Q86U86 1689 aa21.34■■□□□ 1.01
CDH11-205ENST00000562882 IGF1RP08069 1367 aa21.32■■□□□ 1
CDH11-205ENST00000562882 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
CDH11-205ENST00000562882 SYNJ2O15056 1496 aa21.29■■□□□ 1
CDH11-205ENST00000562882 OSCARQ8IYS5 282 aa21.29■■□□□ 1
CDH11-205ENST00000562882 CHD1O14646 1710 aa21.25■□□□□ 0.99
CDH11-205ENST00000562882 ADAMTS12P58397 1594 aa21.24■□□□□ 0.99
CDH11-205ENST00000562882 CHMP7Q8WUX9 453 aaPredicted RBP21.24■□□□□ 0.99
CDH11-205ENST00000562882 FHAD1B1AJZ9 1412 aa21.23■□□□□ 0.99
CDH11-205ENST00000562882 EEA1Q15075 1411 aa21.23■□□□□ 0.99
CDH11-205ENST00000562882 FBLN2P98095 1184 aa21.22■□□□□ 0.99
CDH11-205ENST00000562882 CSRNP3Q8WYN3 585 aa21.19■□□□□ 0.98
CDH11-205ENST00000562882 CUL7Q14999 1698 aa21.18■□□□□ 0.98
CDH11-205ENST00000562882 CARMIL1Q5VZK9 1371 aa21.18■□□□□ 0.98
CDH11-205ENST00000562882 CLASP1Q7Z460 1538 aa21.16■□□□□ 0.98
CDH11-205ENST00000562882 GRIN2AQ12879 1464 aa21.16■□□□□ 0.98
CDH11-205ENST00000562882 NUP160Q12769 1436 aa21.14■□□□□ 0.98
CDH11-205ENST00000562882 FAM9AQ8IZU1 332 aaPredicted RBP21.13■□□□□ 0.97
CDH11-205ENST00000562882 PRXQ9BXM0 1461 aa21.08■□□□□ 0.97
CDH11-205ENST00000562882 RAPGEF2Q9Y4G8 1499 aa21.08■□□□□ 0.97
CDH11-205ENST00000562882 CEP170Q5SW79 1584 aa21.06■□□□□ 0.96
CDH11-205ENST00000562882 ARHGEF11O15085 1522 aa21.01■□□□□ 0.95
CDH11-205ENST00000562882 RIMBP3CA6NJZ7 1639 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms