RNA–Protein interactions for RNA: ENST00000562562.1

ERN2-205, Transcript of endoplasmic reticulum to nucleus signaling 2, humanhuman

TSL 5

Gene ERN2, Length 2,263 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERN2-205ENST00000562562 NISCHQ9Y2I1 1504 aa36.21■■■■□ 3.39
ERN2-205ENST00000562562 CCDC180Q9P1Z9 1646 aa32.04■■■□□ 2.72
ERN2-205ENST00000562562 ABCC9O60706 1549 aa31.15■■■□□ 2.58
ERN2-205ENST00000562562 ZCCHC6Q5VYS8 1495 aaKnown RBP30.23■■■□□ 2.43
ERN2-205ENST00000562562 DCAF8L2P0C7V8 631 aa30.06■■■□□ 2.4
ERN2-205ENST00000562562 NACADO15069 1562 aa30.05■■■□□ 2.4
ERN2-205ENST00000562562 RB1CC1Q8TDY2 1594 aa30.01■■■□□ 2.39
ERN2-205ENST00000562562 MYO15BQ96JP2 1530 aa29.97■■■□□ 2.39
ERN2-205ENST00000562562 DCAF1Q9Y4B6 1507 aa29.95■■■□□ 2.38
ERN2-205ENST00000562562 UNC13AQ9UPW8 1703 aa29.45■■■□□ 2.31
ERN2-205ENST00000562562 SCRIBQ14160 1630 aa29.29■■■□□ 2.28
ERN2-205ENST00000562562 BICRAQ9NZM4 1560 aa29.22■■■□□ 2.27
ERN2-205ENST00000562562 PABPN1Q86U42 306 aaKnown RBP eCLIP29.15■■■□□ 2.26
ERN2-205ENST00000562562 SHROOM4Q9ULL8 1493 aa28.8■■■□□ 2.2
ERN2-205ENST00000562562 DNAJC5BQ9UF47 199 aa28.45■■■□□ 2.14
ERN2-205ENST00000562562 EIF4G1Q04637 1599 aaKnown RBP28.36■■■□□ 2.13
ERN2-205ENST00000562562 CECR2Q9BXF3 1484 aa28.23■■■□□ 2.11
ERN2-205ENST00000562562 CC2D2AQ9P2K1 1620 aa28.19■■■□□ 2.1
ERN2-205ENST00000562562 SMARCA4P51532 1647 aa28.05■■■□□ 2.08
ERN2-205ENST00000562562 BAZ1AQ9NRL2 1556 aaPredicted RBP28■■■□□ 2.07
ERN2-205ENST00000562562 MROH2BQ7Z745 1585 aa27.95■■■□□ 2.06
ERN2-205ENST00000562562 ATAD2BQ9ULI0 1458 aa27.83■■■□□ 2.05
ERN2-205ENST00000562562 PEG3Q9GZU2 1588 aa27.77■■■□□ 2.04
ERN2-205ENST00000562562 NCAPD3P42695 1498 aa27.76■■■□□ 2.03
ERN2-205ENST00000562562 SMARCA2P51531 1590 aa27.75■■■□□ 2.03
ERN2-205ENST00000562562 RSF1Q96T23 1441 aaPredicted RBP27.7■■■□□ 2.02
ERN2-205ENST00000562562 WIZO95785 1651 aa27.65■■■□□ 2.02
ERN2-205ENST00000562562 HMGXB3Q12766 1538 aa27.64■■■□□ 2.01
ERN2-205ENST00000562562 BAZ1BQ9UIG0 1483 aaKnown RBP27.57■■■□□ 2
ERN2-205ENST00000562562 TOP2AP11388 1531 aaKnown RBP27.33■■□□□ 1.97
ERN2-205ENST00000562562 SUPT5HO00267 1087 aaKnown RBP27.12■■□□□ 1.93
ERN2-205ENST00000562562 NESP48681 1621 aa27.07■■□□□ 1.92
ERN2-205ENST00000562562 CCDC88BA6NC98 1476 aa27.03■■□□□ 1.92
ERN2-205ENST00000562562 LAMC3Q9Y6N6 1575 aa26.96■■□□□ 1.91
ERN2-205ENST00000562562 CADPSQ9ULU8 1353 aa26.95■■□□□ 1.9
ERN2-205ENST00000562562 CFTRP13569 1480 aa26.87■■□□□ 1.89
ERN2-205ENST00000562562 ERCC6Q03468 1493 aa26.74■■□□□ 1.87
ERN2-205ENST00000562562 KIF21AQ7Z4S6 1674 aa26.74■■□□□ 1.87
ERN2-205ENST00000562562 PDS5BQ9NTI5 1447 aa26.73■■□□□ 1.87
ERN2-205ENST00000562562 PRDM2Q13029 1718 aa26.67■■□□□ 1.86
ERN2-205ENST00000562562 FANCD2Q9BXW9 1451 aa26.64■■□□□ 1.86
ERN2-205ENST00000562562 THOC2Q8NI27 1593 aaKnown RBP26.6■■□□□ 1.85
ERN2-205ENST00000562562 CEP164Q9UPV0 1460 aa26.56■■□□□ 1.84
ERN2-205ENST00000562562 MRC2Q9UBG0 1479 aa26.48■■□□□ 1.83
ERN2-205ENST00000562562 WDR62O43379 1518 aa26.42■■□□□ 1.82
ERN2-205ENST00000562562 URB2Q14146 1524 aaKnown RBP26.41■■□□□ 1.82
ERN2-205ENST00000562562 CUX2O14529 1486 aa26.4■■□□□ 1.82
ERN2-205ENST00000562562 TOPBP1Q92547 1522 aa26.26■■□□□ 1.79
ERN2-205ENST00000562562 DNMBPQ6XZF7 1577 aa26.24■■□□□ 1.79
ERN2-205ENST00000562562 CUX1P39880 1505 aa26.19■■□□□ 1.78
ERN2-205ENST00000562562 ABCC8Q09428 1581 aa26.19■■□□□ 1.78
ERN2-205ENST00000562562 POLA1P09884 1462 aaPredicted RBP26.07■■□□□ 1.76
ERN2-205ENST00000562562 WRNQ14191 1432 aaPredicted RBP eCLIP26.06■■□□□ 1.76
ERN2-205ENST00000562562 SYNJ1O43426 1573 aa26.05■■□□□ 1.76
ERN2-205ENST00000562562 FGD5Q6ZNL6 1462 aa26.03■■□□□ 1.76
ERN2-205ENST00000562562 BIVM-ERCC5R4GMW8 1640 aa26.01■■□□□ 1.75
ERN2-205ENST00000562562 TOP2BQ02880 1626 aa26■■□□□ 1.75
ERN2-205ENST00000562562 IFT140Q96RY7 1462 aa26■■□□□ 1.75
ERN2-205ENST00000562562 TARBP1Q13395 1621 aaKnown RBP25.99■■□□□ 1.75
ERN2-205ENST00000562562 RAD54L2Q9Y4B4 1467 aa25.97■■□□□ 1.75
ERN2-205ENST00000562562 ZNF608Q9ULD9 1512 aaPredicted RBP25.94■■□□□ 1.74
ERN2-205ENST00000562562 SOGA1O94964 1423 aa25.92■■□□□ 1.74
ERN2-205ENST00000562562 WDR97A6NE52 1622 aa25.84■■□□□ 1.73
ERN2-205ENST00000562562 EIF4G3O43432 1585 aaKnown RBP25.81■■□□□ 1.72
ERN2-205ENST00000562562 AQRO60306 1485 aaKnown RBP eCLIP25.8■■□□□ 1.72
ERN2-205ENST00000562562 ABCA10Q8WWZ4 1543 aa25.79■■□□□ 1.72
ERN2-205ENST00000562562 TDRD9Q8NDG6 1382 aaKnown RBP25.78■■□□□ 1.72
ERN2-205ENST00000562562 ABCA5Q8WWZ7 1642 aa25.68■■□□□ 1.7
ERN2-205ENST00000562562 GAPVD1Q14C86 1478 aa25.63■■□□□ 1.69
ERN2-205ENST00000562562 PBRM1Q86U86 1689 aa25.59■■□□□ 1.69
ERN2-205ENST00000562562 GRIN2BQ13224 1484 aa25.58■■□□□ 1.69
ERN2-205ENST00000562562 TRIM41Q8WV44 630 aa25.57■■□□□ 1.68
ERN2-205ENST00000562562 SNAPC4Q5SXM2 1469 aa25.54■■□□□ 1.68
ERN2-205ENST00000562562 CHIC1Q5VXU3 224 aa25.51■■□□□ 1.67
ERN2-205ENST00000562562 MAGI1Q96QZ7 1491 aaPredicted RBP25.49■■□□□ 1.67
ERN2-205ENST00000562562 KIF27Q86VH2 1401 aa25.46■■□□□ 1.67
ERN2-205ENST00000562562 ERICH3Q5RHP9 1530 aa25.46■■□□□ 1.67
ERN2-205ENST00000562562 CHD1O14646 1710 aa25.44■■□□□ 1.66
ERN2-205ENST00000562562 RUSC2Q8N2Y8 1516 aa25.44■■□□□ 1.66
ERN2-205ENST00000562562 ADAMTS12P58397 1594 aa25.41■■□□□ 1.66
ERN2-205ENST00000562562 IGF1RP08069 1367 aa25.4■■□□□ 1.66
ERN2-205ENST00000562562 SYNJ2O15056 1496 aa25.39■■□□□ 1.66
ERN2-205ENST00000562562 FBLN2P98095 1184 aa25.35■■□□□ 1.65
ERN2-205ENST00000562562 FHAD1B1AJZ9 1412 aa25.33■■□□□ 1.65
ERN2-205ENST00000562562 OSCARQ8IYS5 282 aa25.33■■□□□ 1.64
ERN2-205ENST00000562562 DNAJC5Q9H3Z4 198 aa25.32■■□□□ 1.64
ERN2-205ENST00000562562 CHMP7Q8WUX9 453 aaPredicted RBP25.32■■□□□ 1.64
ERN2-205ENST00000562562 GRIN2AQ12879 1464 aa25.28■■□□□ 1.64
ERN2-205ENST00000562562 CUL7Q14999 1698 aa25.26■■□□□ 1.63
ERN2-205ENST00000562562 CARMIL1Q5VZK9 1371 aa25.21■■□□□ 1.63
ERN2-205ENST00000562562 CEP170Q5SW79 1584 aa25.19■■□□□ 1.62
ERN2-205ENST00000562562 CLASP1Q7Z460 1538 aa25.19■■□□□ 1.62
ERN2-205ENST00000562562 NUP160Q12769 1436 aa25.18■■□□□ 1.62
ERN2-205ENST00000562562 EEA1Q15075 1411 aa25.11■■□□□ 1.61
ERN2-205ENST00000562562 PRXQ9BXM0 1461 aa25.11■■□□□ 1.61
ERN2-205ENST00000562562 CSRNP3Q8WYN3 585 aa25.09■■□□□ 1.61
ERN2-205ENST00000562562 RAPGEF2Q9Y4G8 1499 aa25.08■■□□□ 1.61
ERN2-205ENST00000562562 FAM9AQ8IZU1 332 aaPredicted RBP25.07■■□□□ 1.6
ERN2-205ENST00000562562 ARHGEF11O15085 1522 aa24.98■■□□□ 1.59
ERN2-205ENST00000562562 HRCP23327 699 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms