RNA–Protein interactions for RNA: ENST00000562271.1

LINC01225-201, Transcript of LINC01225 pseudogene, humanhuman

Gene LINC01225, Length 2,270 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01225-201ENST00000562271 NISCHQ9Y2I1 1504 aa38.95■■■■□ 3.83
LINC01225-201ENST00000562271 CCDC180Q9P1Z9 1646 aa34■■■■□ 3.03
LINC01225-201ENST00000562271 ABCC9O60706 1549 aa33.05■■■□□ 2.88
LINC01225-201ENST00000562271 DCAF8L2P0C7V8 631 aa32.74■■■□□ 2.83
LINC01225-201ENST00000562271 ZCCHC6Q5VYS8 1495 aaKnown RBP32.6■■■□□ 2.81
LINC01225-201ENST00000562271 SHROOM4Q9ULL8 1493 aa31.93■■■□□ 2.7
LINC01225-201ENST00000562271 DCAF1Q9Y4B6 1507 aa31.92■■■□□ 2.7
LINC01225-201ENST00000562271 NACADO15069 1562 aa31.79■■■□□ 2.68
LINC01225-201ENST00000562271 RB1CC1Q8TDY2 1594 aa31.7■■■□□ 2.67
LINC01225-201ENST00000562271 MYO15BQ96JP2 1530 aa31.65■■■□□ 2.66
LINC01225-201ENST00000562271 SCRIBQ14160 1630 aa31.6■■■□□ 2.65
LINC01225-201ENST00000562271 UNC13AQ9UPW8 1703 aa31.35■■■□□ 2.61
LINC01225-201ENST00000562271 PABPN1Q86U42 306 aaKnown RBP eCLIP31.18■■■□□ 2.58
LINC01225-201ENST00000562271 BICRAQ9NZM4 1560 aa30.97■■■□□ 2.55
LINC01225-201ENST00000562271 CECR2Q9BXF3 1484 aa30.56■■■□□ 2.48
LINC01225-201ENST00000562271 SUPT5HO00267 1087 aaKnown RBP30.38■■■□□ 2.45
LINC01225-201ENST00000562271 MROH2BQ7Z745 1585 aa30.24■■■□□ 2.43
LINC01225-201ENST00000562271 RSF1Q96T23 1441 aaPredicted RBP30.11■■■□□ 2.41
LINC01225-201ENST00000562271 SMARCA4P51532 1647 aa30.08■■■□□ 2.41
LINC01225-201ENST00000562271 WIZO95785 1651 aa30.03■■■□□ 2.4
LINC01225-201ENST00000562271 BAZ1AQ9NRL2 1556 aaPredicted RBP30.03■■■□□ 2.4
LINC01225-201ENST00000562271 EIF4G1Q04637 1599 aaKnown RBP30.02■■■□□ 2.4
LINC01225-201ENST00000562271 DNAJC5BQ9UF47 199 aa29.78■■■□□ 2.36
LINC01225-201ENST00000562271 CC2D2AQ9P2K1 1620 aa29.77■■■□□ 2.36
LINC01225-201ENST00000562271 ATAD2BQ9ULI0 1458 aa29.7■■■□□ 2.35
LINC01225-201ENST00000562271 PEG3Q9GZU2 1588 aa29.55■■■□□ 2.32
LINC01225-201ENST00000562271 SMARCA2P51531 1590 aa29.51■■■□□ 2.32
LINC01225-201ENST00000562271 BAZ1BQ9UIG0 1483 aaKnown RBP29.5■■■□□ 2.31
LINC01225-201ENST00000562271 TOP2AP11388 1531 aaKnown RBP29.44■■■□□ 2.3
LINC01225-201ENST00000562271 NCAPD3P42695 1498 aa29.4■■■□□ 2.3
LINC01225-201ENST00000562271 HMGXB3Q12766 1538 aa29.28■■■□□ 2.28
LINC01225-201ENST00000562271 CCDC88BA6NC98 1476 aa29.28■■■□□ 2.28
LINC01225-201ENST00000562271 NESP48681 1621 aa28.92■■■□□ 2.22
LINC01225-201ENST00000562271 CHIC1Q5VXU3 224 aa28.9■■■□□ 2.22
LINC01225-201ENST00000562271 ABCC8Q09428 1581 aa28.7■■■□□ 2.19
LINC01225-201ENST00000562271 CADPSQ9ULU8 1353 aa28.69■■■□□ 2.18
LINC01225-201ENST00000562271 CFTRP13569 1480 aa28.67■■■□□ 2.18
LINC01225-201ENST00000562271 LAMC3Q9Y6N6 1575 aa28.47■■■□□ 2.15
LINC01225-201ENST00000562271 KIF21AQ7Z4S6 1674 aa28.46■■■□□ 2.15
LINC01225-201ENST00000562271 PRDM2Q13029 1718 aa28.46■■■□□ 2.15
LINC01225-201ENST00000562271 FANCD2Q9BXW9 1451 aa28.44■■■□□ 2.14
LINC01225-201ENST00000562271 TRIM41Q8WV44 630 aa28.36■■■□□ 2.13
LINC01225-201ENST00000562271 SYNJ1O43426 1573 aa28.36■■■□□ 2.13
LINC01225-201ENST00000562271 WRNQ14191 1432 aaPredicted RBP eCLIP28.31■■■□□ 2.12
LINC01225-201ENST00000562271 CUX1P39880 1505 aa28.27■■■□□ 2.12
LINC01225-201ENST00000562271 PDS5BQ9NTI5 1447 aa28.26■■■□□ 2.11
LINC01225-201ENST00000562271 CEP164Q9UPV0 1460 aa28.26■■■□□ 2.11
LINC01225-201ENST00000562271 ERCC6Q03468 1493 aa28.22■■■□□ 2.11
LINC01225-201ENST00000562271 URB2Q14146 1524 aaKnown RBP28.19■■■□□ 2.1
LINC01225-201ENST00000562271 FAM9AQ8IZU1 332 aaPredicted RBP28.16■■■□□ 2.1
LINC01225-201ENST00000562271 HRCP23327 699 aa28.11■■■□□ 2.09
LINC01225-201ENST00000562271 TOP2BQ02880 1626 aa28.09■■■□□ 2.09
LINC01225-201ENST00000562271 TOPBP1Q92547 1522 aa28.09■■■□□ 2.09
LINC01225-201ENST00000562271 BIVM-ERCC5R4GMW8 1640 aa28.05■■■□□ 2.08
LINC01225-201ENST00000562271 EHMT2Q96KQ7 1210 aa28.03■■■□□ 2.08
LINC01225-201ENST00000562271 RUSC2Q8N2Y8 1516 aa28.03■■■□□ 2.08
LINC01225-201ENST00000562271 FGD5Q6ZNL6 1462 aa28.02■■■□□ 2.08
LINC01225-201ENST00000562271 PCGF6Q9BYE7 350 aa28.02■■■□□ 2.08
LINC01225-201ENST00000562271 DNMBPQ6XZF7 1577 aa28.01■■■□□ 2.07
LINC01225-201ENST00000562271 SOGA1O94964 1423 aa28.01■■■□□ 2.07
LINC01225-201ENST00000562271 THOC2Q8NI27 1593 aaKnown RBP28■■■□□ 2.07
LINC01225-201ENST00000562271 MRC2Q9UBG0 1479 aa28■■■□□ 2.07
LINC01225-201ENST00000562271 RAD54L2Q9Y4B4 1467 aa28■■■□□ 2.07
LINC01225-201ENST00000562271 LOC105371045A0A1W2PR82 267 aa27.97■■■□□ 2.07
LINC01225-201ENST00000562271 POLA1P09884 1462 aaPredicted RBP27.94■■■□□ 2.06
LINC01225-201ENST00000562271 WDR62O43379 1518 aa27.87■■■□□ 2.05
LINC01225-201ENST00000562271 CUX2O14529 1486 aa27.82■■■□□ 2.04
LINC01225-201ENST00000562271 TDRD9Q8NDG6 1382 aaKnown RBP27.76■■■□□ 2.03
LINC01225-201ENST00000562271 ZNF608Q9ULD9 1512 aaPredicted RBP27.72■■■□□ 2.03
LINC01225-201ENST00000562271 TARBP1Q13395 1621 aaKnown RBP27.7■■■□□ 2.03
LINC01225-201ENST00000562271 AQRO60306 1485 aaKnown RBP eCLIP27.66■■■□□ 2.02
LINC01225-201ENST00000562271 WDR97A6NE52 1622 aa27.65■■■□□ 2.02
LINC01225-201ENST00000562271 ABCA10Q8WWZ4 1543 aa27.61■■■□□ 2.01
LINC01225-201ENST00000562271 TRIM26Q12899 539 aaPredicted RBP27.55■■■□□ 2
LINC01225-201ENST00000562271 CSRNP3Q8WYN3 585 aa27.55■■■□□ 2
LINC01225-201ENST00000562271 KIF27Q86VH2 1401 aa27.55■■■□□ 2
LINC01225-201ENST00000562271 IFT140Q96RY7 1462 aa27.52■■■□□ 2
LINC01225-201ENST00000562271 ABCA5Q8WWZ7 1642 aa27.49■■□□□ 1.99
LINC01225-201ENST00000562271 EIF4G3O43432 1585 aaKnown RBP27.48■■□□□ 1.99
LINC01225-201ENST00000562271 IGF1RP08069 1367 aa27.48■■□□□ 1.99
LINC01225-201ENST00000562271 GAPVD1Q14C86 1478 aa27.47■■□□□ 1.99
LINC01225-201ENST00000562271 PBRM1Q86U86 1689 aa27.4■■□□□ 1.98
LINC01225-201ENST00000562271 RAPGEF2Q9Y4G8 1499 aa27.4■■□□□ 1.98
LINC01225-201ENST00000562271 PPARGC1BQ86YN6 1023 aaKnown RBP27.4■■□□□ 1.98
LINC01225-201ENST00000562271 EEA1Q15075 1411 aa27.35■■□□□ 1.97
LINC01225-201ENST00000562271 RANGAP1P46060 587 aaPredicted RBP27.35■■□□□ 1.97
LINC01225-201ENST00000562271 CARMIL1Q5VZK9 1371 aa27.3■■□□□ 1.96
LINC01225-201ENST00000562271 SNAPC4Q5SXM2 1469 aa27.29■■□□□ 1.96
LINC01225-201ENST00000562271 PRXQ9BXM0 1461 aa27.28■■□□□ 1.96
LINC01225-201ENST00000562271 UBTFP17480 764 aaKnown RBP27.28■■□□□ 1.96
LINC01225-201ENST00000562271 FBLN2P98095 1184 aa27.27■■□□□ 1.96
LINC01225-201ENST00000562271 GRIN2BQ13224 1484 aa27.26■■□□□ 1.95
LINC01225-201ENST00000562271 PELP1Q8IZL8 1130 aaKnown RBP27.25■■□□□ 1.95
LINC01225-201ENST00000562271 ERICH3Q5RHP9 1530 aa27.22■■□□□ 1.95
LINC01225-201ENST00000562271 KIF21BO75037 1637 aa27.21■■□□□ 1.95
LINC01225-201ENST00000562271 ADAMTS12P58397 1594 aa27.18■■□□□ 1.94
LINC01225-201ENST00000562271 GOLGA3Q08378 1498 aa27.17■■□□□ 1.94
LINC01225-201ENST00000562271 CUL7Q14999 1698 aa27.14■■□□□ 1.93
LINC01225-201ENST00000562271 FHAD1B1AJZ9 1412 aa27.08■■□□□ 1.93
LINC01225-201ENST00000562271 CHMP7Q8WUX9 453 aaPredicted RBP27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms