RNA–Protein interactions for RNA: ENST00000562066.5

CSK-203, Transcript of C-terminal Src kinase, humanhuman

TSL 4

Gene CSK, Length 533 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSK-203ENST00000562066 NISCHQ9Y2I1 1504 aa32.11■■■□□ 2.73
CSK-203ENST00000562066 CCDC180Q9P1Z9 1646 aa28.4■■■□□ 2.14
CSK-203ENST00000562066 ABCC9O60706 1549 aa27.73■■■□□ 2.03
CSK-203ENST00000562066 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.9
CSK-203ENST00000562066 ZCCHC6Q5VYS8 1495 aaKnown RBP26.8■■□□□ 1.88
CSK-203ENST00000562066 RB1CC1Q8TDY2 1594 aa26.63■■□□□ 1.85
CSK-203ENST00000562066 NACADO15069 1562 aa26.63■■□□□ 1.85
CSK-203ENST00000562066 DCAF1Q9Y4B6 1507 aa26.46■■□□□ 1.83
CSK-203ENST00000562066 MYO15BQ96JP2 1530 aa26.44■■□□□ 1.82
CSK-203ENST00000562066 UNC13AQ9UPW8 1703 aa26.19■■□□□ 1.78
CSK-203ENST00000562066 SCRIBQ14160 1630 aa26.11■■□□□ 1.77
CSK-203ENST00000562066 PABPN1Q86U42 306 aaKnown RBP eCLIP25.98■■□□□ 1.75
CSK-203ENST00000562066 BICRAQ9NZM4 1560 aa25.9■■□□□ 1.74
CSK-203ENST00000562066 SHROOM4Q9ULL8 1493 aa25.73■■□□□ 1.71
CSK-203ENST00000562066 DNAJC5BQ9UF47 199 aa25.49■■□□□ 1.67
CSK-203ENST00000562066 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
CSK-203ENST00000562066 CECR2Q9BXF3 1484 aa25.09■■□□□ 1.61
CSK-203ENST00000562066 CC2D2AQ9P2K1 1620 aa25.04■■□□□ 1.6
CSK-203ENST00000562066 SMARCA4P51532 1647 aa24.9■■□□□ 1.58
CSK-203ENST00000562066 BAZ1AQ9NRL2 1556 aaPredicted RBP24.84■■□□□ 1.57
CSK-203ENST00000562066 MROH2BQ7Z745 1585 aa24.83■■□□□ 1.57
CSK-203ENST00000562066 ATAD2BQ9ULI0 1458 aa24.68■■□□□ 1.54
CSK-203ENST00000562066 WIZO95785 1651 aa24.62■■□□□ 1.53
CSK-203ENST00000562066 SMARCA2P51531 1590 aa24.61■■□□□ 1.53
CSK-203ENST00000562066 RSF1Q96T23 1441 aaPredicted RBP24.59■■□□□ 1.53
CSK-203ENST00000562066 NCAPD3P42695 1498 aa24.57■■□□□ 1.52
CSK-203ENST00000562066 PEG3Q9GZU2 1588 aa24.56■■□□□ 1.52
CSK-203ENST00000562066 BAZ1BQ9UIG0 1483 aaKnown RBP24.51■■□□□ 1.51
CSK-203ENST00000562066 HMGXB3Q12766 1538 aa24.47■■□□□ 1.51
CSK-203ENST00000562066 TOP2AP11388 1531 aaKnown RBP24.27■■□□□ 1.48
CSK-203ENST00000562066 SUPT5HO00267 1087 aaKnown RBP24.27■■□□□ 1.48
CSK-203ENST00000562066 NESP48681 1621 aa24.09■■□□□ 1.45
CSK-203ENST00000562066 CCDC88BA6NC98 1476 aa24.02■■□□□ 1.44
CSK-203ENST00000562066 LAMC3Q9Y6N6 1575 aa23.9■■□□□ 1.42
CSK-203ENST00000562066 CADPSQ9ULU8 1353 aa23.89■■□□□ 1.41
CSK-203ENST00000562066 ERCC6Q03468 1493 aa23.81■■□□□ 1.4
CSK-203ENST00000562066 KIF21AQ7Z4S6 1674 aa23.8■■□□□ 1.4
CSK-203ENST00000562066 CFTRP13569 1480 aa23.8■■□□□ 1.4
CSK-203ENST00000562066 PDS5BQ9NTI5 1447 aa23.71■■□□□ 1.39
CSK-203ENST00000562066 PRDM2Q13029 1718 aa23.7■■□□□ 1.39
CSK-203ENST00000562066 DNAJC5Q9H3Z4 198 aa23.68■■□□□ 1.38
CSK-203ENST00000562066 FANCD2Q9BXW9 1451 aa23.67■■□□□ 1.38
CSK-203ENST00000562066 CEP164Q9UPV0 1460 aa23.6■■□□□ 1.37
CSK-203ENST00000562066 THOC2Q8NI27 1593 aaKnown RBP23.6■■□□□ 1.37
CSK-203ENST00000562066 MRC2Q9UBG0 1479 aa23.52■■□□□ 1.36
CSK-203ENST00000562066 URB2Q14146 1524 aaKnown RBP23.45■■□□□ 1.34
CSK-203ENST00000562066 WDR62O43379 1518 aa23.42■■□□□ 1.34
CSK-203ENST00000562066 CUX2O14529 1486 aa23.37■■□□□ 1.33
CSK-203ENST00000562066 TOPBP1Q92547 1522 aa23.33■■□□□ 1.32
CSK-203ENST00000562066 ABCC8Q09428 1581 aa23.31■■□□□ 1.32
CSK-203ENST00000562066 DNMBPQ6XZF7 1577 aa23.3■■□□□ 1.32
CSK-203ENST00000562066 CUX1P39880 1505 aa23.28■■□□□ 1.32
CSK-203ENST00000562066 SYNJ1O43426 1573 aa23.18■■□□□ 1.3
CSK-203ENST00000562066 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
CSK-203ENST00000562066 FGD5Q6ZNL6 1462 aa23.15■■□□□ 1.3
CSK-203ENST00000562066 POLA1P09884 1462 aaPredicted RBP23.14■■□□□ 1.29
CSK-203ENST00000562066 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
CSK-203ENST00000562066 BIVM-ERCC5R4GMW8 1640 aa23.09■■□□□ 1.29
CSK-203ENST00000562066 TOP2BQ02880 1626 aa23.08■■□□□ 1.29
CSK-203ENST00000562066 IFT140Q96RY7 1462 aa23.06■■□□□ 1.28
CSK-203ENST00000562066 ZNF608Q9ULD9 1512 aaPredicted RBP23.06■■□□□ 1.28
CSK-203ENST00000562066 TARBP1Q13395 1621 aaKnown RBP23.05■■□□□ 1.28
CSK-203ENST00000562066 SOGA1O94964 1423 aa23.04■■□□□ 1.28
CSK-203ENST00000562066 EIF4G3O43432 1585 aaKnown RBP22.95■■□□□ 1.26
CSK-203ENST00000562066 WDR97A6NE52 1622 aa22.94■■□□□ 1.26
CSK-203ENST00000562066 AQRO60306 1485 aaKnown RBP eCLIP22.94■■□□□ 1.26
CSK-203ENST00000562066 TDRD9Q8NDG6 1382 aaKnown RBP22.94■■□□□ 1.26
CSK-203ENST00000562066 ABCA10Q8WWZ4 1543 aa22.86■■□□□ 1.25
CSK-203ENST00000562066 TRIM41Q8WV44 630 aa22.81■■□□□ 1.24
CSK-203ENST00000562066 ABCA5Q8WWZ7 1642 aa22.79■■□□□ 1.24
CSK-203ENST00000562066 PBRM1Q86U86 1689 aa22.78■■□□□ 1.24
CSK-203ENST00000562066 GAPVD1Q14C86 1478 aa22.77■■□□□ 1.24
CSK-203ENST00000562066 SNAPC4Q5SXM2 1469 aa22.73■■□□□ 1.23
CSK-203ENST00000562066 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
CSK-203ENST00000562066 GRIN2BQ13224 1484 aa22.71■■□□□ 1.23
CSK-203ENST00000562066 CHD1O14646 1710 aa22.67■■□□□ 1.22
CSK-203ENST00000562066 RUSC2Q8N2Y8 1516 aa22.66■■□□□ 1.22
CSK-203ENST00000562066 FBLN2P98095 1184 aa22.65■■□□□ 1.22
CSK-203ENST00000562066 KIF27Q86VH2 1401 aa22.62■■□□□ 1.21
CSK-203ENST00000562066 MAGI1Q96QZ7 1491 aaPredicted RBP22.6■■□□□ 1.21
CSK-203ENST00000562066 ADAMTS12P58397 1594 aa22.58■■□□□ 1.2
CSK-203ENST00000562066 ERICH3Q5RHP9 1530 aa22.57■■□□□ 1.2
CSK-203ENST00000562066 SYNJ2O15056 1496 aa22.54■■□□□ 1.2
CSK-203ENST00000562066 IGF1RP08069 1367 aa22.53■■□□□ 1.2
CSK-203ENST00000562066 CHMP7Q8WUX9 453 aaPredicted RBP22.53■■□□□ 1.2
CSK-203ENST00000562066 FAM9AQ8IZU1 332 aaPredicted RBP22.49■■□□□ 1.19
CSK-203ENST00000562066 FHAD1B1AJZ9 1412 aa22.48■■□□□ 1.19
CSK-203ENST00000562066 OSCARQ8IYS5 282 aa22.48■■□□□ 1.19
CSK-203ENST00000562066 GRIN2AQ12879 1464 aa22.45■■□□□ 1.18
CSK-203ENST00000562066 CUL7Q14999 1698 aa22.44■■□□□ 1.18
CSK-203ENST00000562066 CARMIL1Q5VZK9 1371 aa22.41■■□□□ 1.18
CSK-203ENST00000562066 CEP170Q5SW79 1584 aa22.38■■□□□ 1.17
CSK-203ENST00000562066 CLASP1Q7Z460 1538 aa22.33■■□□□ 1.17
CSK-203ENST00000562066 CSRNP3Q8WYN3 585 aa22.31■■□□□ 1.16
CSK-203ENST00000562066 NUP160Q12769 1436 aa22.31■■□□□ 1.16
CSK-203ENST00000562066 EHMT2Q96KQ7 1210 aa22.29■■□□□ 1.16
CSK-203ENST00000562066 RAPGEF2Q9Y4G8 1499 aa22.28■■□□□ 1.16
CSK-203ENST00000562066 EEA1Q15075 1411 aa22.28■■□□□ 1.16
CSK-203ENST00000562066 PRXQ9BXM0 1461 aa22.26■■□□□ 1.15
CSK-203ENST00000562066 RIMBP3CA6NJZ7 1639 aa22.2■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms