RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 NISCHQ9Y2I1 1504 aa22.88■■□□□ 1.25
TUBGCP4-202ENST00000561691 CCDC180Q9P1Z9 1646 aa19.79■□□□□ 0.76
TUBGCP4-202ENST00000561691 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
TUBGCP4-202ENST00000561691 DCAF1Q9Y4B6 1507 aa18.92■□□□□ 0.62
TUBGCP4-202ENST00000561691 SHROOM4Q9ULL8 1493 aa18.76■□□□□ 0.59
TUBGCP4-202ENST00000561691 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
TUBGCP4-202ENST00000561691 MYO15BQ96JP2 1530 aa18.61■□□□□ 0.57
TUBGCP4-202ENST00000561691 ABCC9O60706 1549 aa18.57■□□□□ 0.56
TUBGCP4-202ENST00000561691 NACADO15069 1562 aa18.39■□□□□ 0.53
TUBGCP4-202ENST00000561691 SCRIBQ14160 1630 aa18.26■□□□□ 0.51
TUBGCP4-202ENST00000561691 RB1CC1Q8TDY2 1594 aa18.16■□□□□ 0.5
TUBGCP4-202ENST00000561691 SUPT5HO00267 1087 aaKnown RBP18.1■□□□□ 0.49
TUBGCP4-202ENST00000561691 UNC13AQ9UPW8 1703 aa17.87■□□□□ 0.45
TUBGCP4-202ENST00000561691 RSF1Q96T23 1441 aaPredicted RBP17.86■□□□□ 0.45
TUBGCP4-202ENST00000561691 CECR2Q9BXF3 1484 aa17.81■□□□□ 0.44
TUBGCP4-202ENST00000561691 BICRAQ9NZM4 1560 aa17.75■□□□□ 0.43
TUBGCP4-202ENST00000561691 MROH2BQ7Z745 1585 aa17.72■□□□□ 0.43
TUBGCP4-202ENST00000561691 CHIC1Q5VXU3 224 aa17.66■□□□□ 0.42
TUBGCP4-202ENST00000561691 BAZ1AQ9NRL2 1556 aaPredicted RBP17.6■□□□□ 0.41
TUBGCP4-202ENST00000561691 PABPN1Q86U42 306 aaKnown RBP eCLIP17.56■□□□□ 0.4
TUBGCP4-202ENST00000561691 WIZO95785 1651 aa17.55■□□□□ 0.4
TUBGCP4-202ENST00000561691 SMARCA4P51532 1647 aa17.53■□□□□ 0.4
TUBGCP4-202ENST00000561691 AEBP2Q6ZN18 517 aaPredicted RBP17.43■□□□□ 0.38
TUBGCP4-202ENST00000561691 TOP2AP11388 1531 aaKnown RBP17.35■□□□□ 0.37
TUBGCP4-202ENST00000561691 PEG3Q9GZU2 1588 aa17.34■□□□□ 0.37
TUBGCP4-202ENST00000561691 EIF4G1Q04637 1599 aaKnown RBP17.25■□□□□ 0.35
TUBGCP4-202ENST00000561691 SMARCA2P51531 1590 aa17.23■□□□□ 0.35
TUBGCP4-202ENST00000561691 ATAD2BQ9ULI0 1458 aa17.22■□□□□ 0.35
TUBGCP4-202ENST00000561691 CCDC88BA6NC98 1476 aa17.21■□□□□ 0.35
TUBGCP4-202ENST00000561691 BAZ1BQ9UIG0 1483 aaKnown RBP17.06■□□□□ 0.32
TUBGCP4-202ENST00000561691 NCAPD3P42695 1498 aa17.03■□□□□ 0.32
TUBGCP4-202ENST00000561691 HMGXB3Q12766 1538 aa16.99■□□□□ 0.31
TUBGCP4-202ENST00000561691 TRIM41Q8WV44 630 aa16.98■□□□□ 0.31
TUBGCP4-202ENST00000561691 ABCC8Q09428 1581 aa16.9■□□□□ 0.3
TUBGCP4-202ENST00000561691 LOC105371045A0A1W2PR82 267 aa16.85■□□□□ 0.29
TUBGCP4-202ENST00000561691 CC2D2AQ9P2K1 1620 aa16.81■□□□□ 0.28
TUBGCP4-202ENST00000561691 WRNQ14191 1432 aaPredicted RBP eCLIP16.73■□□□□ 0.27
TUBGCP4-202ENST00000561691 SYNJ1O43426 1573 aa16.71■□□□□ 0.27
TUBGCP4-202ENST00000561691 CFTRP13569 1480 aa16.71■□□□□ 0.26
TUBGCP4-202ENST00000561691 FAM9AQ8IZU1 332 aaPredicted RBP16.7■□□□□ 0.26
TUBGCP4-202ENST00000561691 SOGA1O94964 1423 aa16.65■□□□□ 0.26
TUBGCP4-202ENST00000561691 RUSC2Q8N2Y8 1516 aa16.61■□□□□ 0.25
TUBGCP4-202ENST00000561691 TOP2BQ02880 1626 aa16.59■□□□□ 0.25
TUBGCP4-202ENST00000561691 CADPSQ9ULU8 1353 aa16.58■□□□□ 0.24
TUBGCP4-202ENST00000561691 BIVM-ERCC5R4GMW8 1640 aa16.57■□□□□ 0.24
TUBGCP4-202ENST00000561691 EEA1Q15075 1411 aa16.55■□□□□ 0.24
TUBGCP4-202ENST00000561691 PRDM2Q13029 1718 aa16.55■□□□□ 0.24
TUBGCP4-202ENST00000561691 CUX1P39880 1505 aa16.54■□□□□ 0.24
TUBGCP4-202ENST00000561691 DNAJC5BQ9UF47 199 aa16.49■□□□□ 0.23
TUBGCP4-202ENST00000561691 CSRNP3Q8WYN3 585 aa16.47■□□□□ 0.23
TUBGCP4-202ENST00000561691 PELP1Q8IZL8 1130 aaKnown RBP16.44■□□□□ 0.22
TUBGCP4-202ENST00000561691 EHMT2Q96KQ7 1210 aa16.44■□□□□ 0.22
TUBGCP4-202ENST00000561691 NESP48681 1621 aa16.42■□□□□ 0.22
TUBGCP4-202ENST00000561691 HRCP23327 699 aa16.41■□□□□ 0.22
TUBGCP4-202ENST00000561691 FANCD2Q9BXW9 1451 aa16.39■□□□□ 0.21
TUBGCP4-202ENST00000561691 KIF21BO75037 1637 aa16.38■□□□□ 0.21
TUBGCP4-202ENST00000561691 TNIKQ9UKE5 1360 aa16.37■□□□□ 0.21
TUBGCP4-202ENST00000561691 LAMC3Q9Y6N6 1575 aa16.35■□□□□ 0.21
TUBGCP4-202ENST00000561691 GOLGA3Q08378 1498 aa16.35■□□□□ 0.21
TUBGCP4-202ENST00000561691 CEP164Q9UPV0 1460 aa16.33■□□□□ 0.2
TUBGCP4-202ENST00000561691 CEP162Q5TB80 1403 aa16.3■□□□□ 0.2
TUBGCP4-202ENST00000561691 FGD5Q6ZNL6 1462 aa16.29■□□□□ 0.2
TUBGCP4-202ENST00000561691 PRXQ9BXM0 1461 aa16.29■□□□□ 0.2
TUBGCP4-202ENST00000561691 RAPGEF2Q9Y4G8 1499 aa16.28■□□□□ 0.2
TUBGCP4-202ENST00000561691 DNMBPQ6XZF7 1577 aa16.27■□□□□ 0.2
TUBGCP4-202ENST00000561691 KIF27Q86VH2 1401 aa16.26■□□□□ 0.19
TUBGCP4-202ENST00000561691 TOPBP1Q92547 1522 aa16.25■□□□□ 0.19
TUBGCP4-202ENST00000561691 URB2Q14146 1524 aaKnown RBP16.23■□□□□ 0.19
TUBGCP4-202ENST00000561691 ERICH3Q5RHP9 1530 aa16.23■□□□□ 0.19
TUBGCP4-202ENST00000561691 POLA1P09884 1462 aaPredicted RBP16.2■□□□□ 0.18
TUBGCP4-202ENST00000561691 PCGF6Q9BYE7 350 aa16.2■□□□□ 0.18
TUBGCP4-202ENST00000561691 CUX2O14529 1486 aa16.2■□□□□ 0.18
TUBGCP4-202ENST00000561691 PDS5BQ9NTI5 1447 aa16.2■□□□□ 0.18
TUBGCP4-202ENST00000561691 UBTFP17480 764 aaKnown RBP16.19■□□□□ 0.18
TUBGCP4-202ENST00000561691 IGF1RP08069 1367 aa16.18■□□□□ 0.18
TUBGCP4-202ENST00000561691 KIF21AQ7Z4S6 1674 aa16.17■□□□□ 0.18
TUBGCP4-202ENST00000561691 ABCA10Q8WWZ4 1543 aa16.16■□□□□ 0.18
TUBGCP4-202ENST00000561691 RAD54L2Q9Y4B4 1467 aa16.16■□□□□ 0.18
TUBGCP4-202ENST00000561691 TRIM26Q12899 539 aaPredicted RBP16.14■□□□□ 0.17
TUBGCP4-202ENST00000561691 WDR97A6NE52 1622 aa16.1■□□□□ 0.17
TUBGCP4-202ENST00000561691 CLIP1P30622 1438 aa16.1■□□□□ 0.17
TUBGCP4-202ENST00000561691 CARMIL1Q5VZK9 1371 aa16.04■□□□□ 0.16
TUBGCP4-202ENST00000561691 TARBP1Q13395 1621 aaKnown RBP16.03■□□□□ 0.16
TUBGCP4-202ENST00000561691 ABCA5Q8WWZ7 1642 aa16.02■□□□□ 0.16
TUBGCP4-202ENST00000561691 MRC2Q9UBG0 1479 aa16.02■□□□□ 0.15
TUBGCP4-202ENST00000561691 VPS8Q8N3P4 1428 aa16.01■□□□□ 0.15
TUBGCP4-202ENST00000561691 ARAP1Q96P48 1450 aa16■□□□□ 0.15
TUBGCP4-202ENST00000561691 PPARGC1BQ86YN6 1023 aaKnown RBP16■□□□□ 0.15
TUBGCP4-202ENST00000561691 WDR62O43379 1518 aa15.96■□□□□ 0.15
TUBGCP4-202ENST00000561691 TDRD9Q8NDG6 1382 aaKnown RBP15.96■□□□□ 0.14
TUBGCP4-202ENST00000561691 CUL7Q14999 1698 aa15.95■□□□□ 0.14
TUBGCP4-202ENST00000561691 ARHGAP35Q9NRY4 1499 aa15.94■□□□□ 0.14
TUBGCP4-202ENST00000561691 MYT1Q01538 1121 aa15.94■□□□□ 0.14
TUBGCP4-202ENST00000561691 GAPVD1Q14C86 1478 aa15.93■□□□□ 0.14
TUBGCP4-202ENST00000561691 THOC2Q8NI27 1593 aaKnown RBP15.89■□□□□ 0.13
TUBGCP4-202ENST00000561691 RANGAP1P46060 587 aaPredicted RBP15.88■□□□□ 0.13
TUBGCP4-202ENST00000561691 IFT140Q96RY7 1462 aa15.85■□□□□ 0.13
TUBGCP4-202ENST00000561691 AQRO60306 1485 aaKnown RBP eCLIP15.84■□□□□ 0.131e-6■■■■□ 23
TUBGCP4-202ENST00000561691 ZNF608Q9ULD9 1512 aaPredicted RBP15.83■□□□□ 0.12
TUBGCP4-202ENST00000561691 PBRM1Q86U86 1689 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms