RNA–Protein interactions for RNA: ENST00000561527.5

AC010542.3-201, humanhuman

TSL 4

Gene AC010542.3, Length 586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-201ENST00000561527 NISCHQ9Y2I1 1504 aa36.05■■■■□ 3.36
AC010542.3-201ENST00000561527 CCDC180Q9P1Z9 1646 aa31.49■■■□□ 2.63
AC010542.3-201ENST00000561527 ABCC9O60706 1549 aa31.37■■■□□ 2.61
AC010542.3-201ENST00000561527 ZCCHC6Q5VYS8 1495 aaKnown RBP30.28■■■□□ 2.44
AC010542.3-201ENST00000561527 DNAJC5BQ9UF47 199 aa30.25■■■□□ 2.43
AC010542.3-201ENST00000561527 DCAF1Q9Y4B6 1507 aa29.92■■■□□ 2.38
AC010542.3-201ENST00000561527 DCAF8L2P0C7V8 631 aa29.68■■■□□ 2.34
AC010542.3-201ENST00000561527 MYO15BQ96JP2 1530 aa29.58■■■□□ 2.33
AC010542.3-201ENST00000561527 RB1CC1Q8TDY2 1594 aa29.48■■■□□ 2.31
AC010542.3-201ENST00000561527 NACADO15069 1562 aa29.32■■■□□ 2.28
AC010542.3-201ENST00000561527 SHROOM4Q9ULL8 1493 aa29.28■■■□□ 2.28
AC010542.3-201ENST00000561527 PABPN1Q86U42 306 aaKnown RBP eCLIP29■■■□□ 2.23
AC010542.3-201ENST00000561527 UNC13AQ9UPW8 1703 aa28.94■■■□□ 2.22
AC010542.3-201ENST00000561527 SCRIBQ14160 1630 aa28.78■■■□□ 2.2
AC010542.3-201ENST00000561527 BICRAQ9NZM4 1560 aa28.78■■■□□ 2.2
AC010542.3-201ENST00000561527 DNAJC5Q9H3Z4 198 aa28.35■■■□□ 2.13
AC010542.3-201ENST00000561527 CECR2Q9BXF3 1484 aa28.34■■■□□ 2.13
AC010542.3-201ENST00000561527 CC2D2AQ9P2K1 1620 aa28.34■■■□□ 2.13
AC010542.3-201ENST00000561527 SUPT5HO00267 1087 aaKnown RBP28.3■■■□□ 2.12
AC010542.3-201ENST00000561527 EIF4G1Q04637 1599 aaKnown RBP28.07■■■□□ 2.08
AC010542.3-201ENST00000561527 RSF1Q96T23 1441 aaPredicted RBP27.96■■■□□ 2.07
AC010542.3-201ENST00000561527 BAZ1AQ9NRL2 1556 aaPredicted RBP27.88■■■□□ 2.05
AC010542.3-201ENST00000561527 MROH2BQ7Z745 1585 aa27.77■■■□□ 2.04
AC010542.3-201ENST00000561527 SMARCA4P51532 1647 aa27.68■■■□□ 2.02
AC010542.3-201ENST00000561527 WIZO95785 1651 aa27.54■■■□□ 2
AC010542.3-201ENST00000561527 CUX2O14529 1486 aa27.42■■□□□ 1.98
AC010542.3-201ENST00000561527 PEG3Q9GZU2 1588 aa27.4■■□□□ 1.98
AC010542.3-201ENST00000561527 TOP2AP11388 1531 aaKnown RBP27.36■■□□□ 1.97
AC010542.3-201ENST00000561527 SMARCA2P51531 1590 aa27.29■■□□□ 1.96
AC010542.3-201ENST00000561527 ATAD2BQ9ULI0 1458 aa27.21■■□□□ 1.95
AC010542.3-201ENST00000561527 CHIC1Q5VXU3 224 aa27.19■■□□□ 1.94
AC010542.3-201ENST00000561527 BAZ1BQ9UIG0 1483 aaKnown RBP27.08■■□□□ 1.93
AC010542.3-201ENST00000561527 ERCC6Q03468 1493 aa27.07■■□□□ 1.92
AC010542.3-201ENST00000561527 CCDC88BA6NC98 1476 aa27.04■■□□□ 1.92
AC010542.3-201ENST00000561527 NCAPD3P42695 1498 aa27.02■■□□□ 1.92
AC010542.3-201ENST00000561527 HMGXB3Q12766 1538 aa27■■□□□ 1.91
AC010542.3-201ENST00000561527 NESP48681 1621 aa26.74■■□□□ 1.87
AC010542.3-201ENST00000561527 TRIM41Q8WV44 630 aa26.73■■□□□ 1.87
AC010542.3-201ENST00000561527 THOC2Q8NI27 1593 aaKnown RBP26.71■■□□□ 1.87
AC010542.3-201ENST00000561527 CFTRP13569 1480 aa26.42■■□□□ 1.82
AC010542.3-201ENST00000561527 LAMC3Q9Y6N6 1575 aa26.41■■□□□ 1.82
AC010542.3-201ENST00000561527 KIF21AQ7Z4S6 1674 aa26.4■■□□□ 1.82
AC010542.3-201ENST00000561527 ABCC8Q09428 1581 aa26.39■■□□□ 1.82
AC010542.3-201ENST00000561527 WRNQ14191 1432 aaPredicted RBP eCLIP26.36■■□□□ 1.81
AC010542.3-201ENST00000561527 PRDM2Q13029 1718 aa26.33■■□□□ 1.81
AC010542.3-201ENST00000561527 CADPSQ9ULU8 1353 aa26.33■■□□□ 1.8
AC010542.3-201ENST00000561527 PDS5BQ9NTI5 1447 aa26.2■■□□□ 1.78
AC010542.3-201ENST00000561527 EEA1Q15075 1411 aa26.17■■□□□ 1.78
AC010542.3-201ENST00000561527 SYNJ1O43426 1573 aa26.14■■□□□ 1.78
AC010542.3-201ENST00000561527 TOP2BQ02880 1626 aa26.14■■□□□ 1.77
AC010542.3-201ENST00000561527 BIVM-ERCC5R4GMW8 1640 aa26.12■■□□□ 1.77
AC010542.3-201ENST00000561527 WDR62O43379 1518 aa26.11■■□□□ 1.77
AC010542.3-201ENST00000561527 MRC2Q9UBG0 1479 aa26.09■■□□□ 1.77
AC010542.3-201ENST00000561527 FAM9AQ8IZU1 332 aaPredicted RBP26.08■■□□□ 1.77
AC010542.3-201ENST00000561527 LOC105371045A0A1W2PR82 267 aa26.06■■□□□ 1.76
AC010542.3-201ENST00000561527 FANCD2Q9BXW9 1451 aa25.99■■□□□ 1.75
AC010542.3-201ENST00000561527 CUX1P39880 1505 aa25.98■■□□□ 1.75
AC010542.3-201ENST00000561527 SOGA1O94964 1423 aa25.95■■□□□ 1.74
AC010542.3-201ENST00000561527 CSRNP3Q8WYN3 585 aa25.93■■□□□ 1.74
AC010542.3-201ENST00000561527 OSCARQ8IYS5 282 aa25.9■■□□□ 1.74
AC010542.3-201ENST00000561527 CEP164Q9UPV0 1460 aa25.85■■□□□ 1.73
AC010542.3-201ENST00000561527 RIMBP3CA6NJZ7 1639 aa25.81■■□□□ 1.72
AC010542.3-201ENST00000561527 RIMBP3BA6NNM3 1639 aa25.81■■□□□ 1.72
AC010542.3-201ENST00000561527 RIMBP3Q9UFD9 1639 aa25.81■■□□□ 1.72
AC010542.3-201ENST00000561527 DNMBPQ6XZF7 1577 aa25.81■■□□□ 1.72
AC010542.3-201ENST00000561527 RUSC2Q8N2Y8 1516 aa25.8■■□□□ 1.72
AC010542.3-201ENST00000561527 KIF27Q86VH2 1401 aa25.74■■□□□ 1.71
AC010542.3-201ENST00000561527 KIF21BO75037 1637 aa25.71■■□□□ 1.71
AC010542.3-201ENST00000561527 TOPBP1Q92547 1522 aa25.71■■□□□ 1.71
AC010542.3-201ENST00000561527 GOLGA3Q08378 1498 aa25.71■■□□□ 1.71
AC010542.3-201ENST00000561527 FGD5Q6ZNL6 1462 aa25.71■■□□□ 1.71
AC010542.3-201ENST00000561527 TNIKQ9UKE5 1360 aa25.67■■□□□ 1.7
AC010542.3-201ENST00000561527 ARHGEF11O15085 1522 aa25.63■■□□□ 1.69
AC010542.3-201ENST00000561527 URB2Q14146 1524 aaKnown RBP25.61■■□□□ 1.69
AC010542.3-201ENST00000561527 EHMT2Q96KQ7 1210 aa25.59■■□□□ 1.69
AC010542.3-201ENST00000561527 UBTFP17480 764 aaKnown RBP25.57■■□□□ 1.68
AC010542.3-201ENST00000561527 POLA1P09884 1462 aaPredicted RBP25.57■■□□□ 1.68
AC010542.3-201ENST00000561527 ERICH3Q5RHP9 1530 aa25.55■■□□□ 1.68
AC010542.3-201ENST00000561527 ABCA10Q8WWZ4 1543 aa25.54■■□□□ 1.68
AC010542.3-201ENST00000561527 PRXQ9BXM0 1461 aa25.53■■□□□ 1.68
AC010542.3-201ENST00000561527 IGF1RP08069 1367 aa25.44■■□□□ 1.66
AC010542.3-201ENST00000561527 RAPGEF2Q9Y4G8 1499 aa25.44■■□□□ 1.66
AC010542.3-201ENST00000561527 CEP162Q5TB80 1403 aa25.44■■□□□ 1.66
AC010542.3-201ENST00000561527 RAD54L2Q9Y4B4 1467 aa25.43■■□□□ 1.66
AC010542.3-201ENST00000561527 ZNF608Q9ULD9 1512 aaPredicted RBP25.41■■□□□ 1.66
AC010542.3-201ENST00000561527 WDR97A6NE52 1622 aa25.39■■□□□ 1.66
AC010542.3-201ENST00000561527 CARMIL1Q5VZK9 1371 aa25.35■■□□□ 1.65
AC010542.3-201ENST00000561527 CYB5RLQ6IPT4 315 aa25.34■■□□□ 1.65
AC010542.3-201ENST00000561527 ARAP1Q96P48 1450 aa25.34■■□□□ 1.65
AC010542.3-201ENST00000561527 IFT140Q96RY7 1462 aa25.31■■□□□ 1.64
AC010542.3-201ENST00000561527 CUL7Q14999 1698 aa25.31■■□□□ 1.64
AC010542.3-201ENST00000561527 TARBP1Q13395 1621 aaKnown RBP25.3■■□□□ 1.64
AC010542.3-201ENST00000561527 ABCA5Q8WWZ7 1642 aa25.28■■□□□ 1.64
AC010542.3-201ENST00000561527 TRHP20396 242 aaPredicted RBP25.28■■□□□ 1.64
AC010542.3-201ENST00000561527 GAPVD1Q14C86 1478 aa25.27■■□□□ 1.64
AC010542.3-201ENST00000561527 CLIP1P30622 1438 aa25.26■■□□□ 1.63
AC010542.3-201ENST00000561527 EIF4G3O43432 1585 aaKnown RBP25.24■■□□□ 1.63
AC010542.3-201ENST00000561527 CHD1O14646 1710 aa25.22■■□□□ 1.63
AC010542.3-201ENST00000561527 TDRD9Q8NDG6 1382 aaKnown RBP25.2■■□□□ 1.63
AC010542.3-201ENST00000561527 AEBP2Q6ZN18 517 aaPredicted RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms