RNA–Protein interactions for RNA: ENST00000561092.1

ETFA-219, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 461 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-219ENST00000561092 NISCHQ9Y2I1 1504 aa45.56■■■■■ 4.88
ETFA-219ENST00000561092 CCDC180Q9P1Z9 1646 aa40.44■■■■■ 4.06
ETFA-219ENST00000561092 ABCC9O60706 1549 aa39■■■■□ 3.83
ETFA-219ENST00000561092 ZCCHC6Q5VYS8 1495 aaKnown RBP38.04■■■■□ 3.68
ETFA-219ENST00000561092 NACADO15069 1562 aa37.89■■■■□ 3.66
ETFA-219ENST00000561092 RB1CC1Q8TDY2 1594 aa37.83■■■■□ 3.65
ETFA-219ENST00000561092 MYO15BQ96JP2 1530 aa37.82■■■■□ 3.65
ETFA-219ENST00000561092 DCAF1Q9Y4B6 1507 aa37.79■■■■□ 3.64
ETFA-219ENST00000561092 DCAF8L2P0C7V8 631 aa37.79■■■■□ 3.64
ETFA-219ENST00000561092 UNC13AQ9UPW8 1703 aa36.96■■■■□ 3.51
ETFA-219ENST00000561092 SCRIBQ14160 1630 aa36.8■■■■□ 3.48
ETFA-219ENST00000561092 BICRAQ9NZM4 1560 aa36.59■■■■□ 3.45
ETFA-219ENST00000561092 PABPN1Q86U42 306 aaKnown RBP eCLIP36.45■■■■□ 3.43
ETFA-219ENST00000561092 SHROOM4Q9ULL8 1493 aa36.38■■■■□ 3.41
ETFA-219ENST00000561092 EIF4G1Q04637 1599 aaKnown RBP35.61■■■■□ 3.29
ETFA-219ENST00000561092 CECR2Q9BXF3 1484 aa35.36■■■■□ 3.25
ETFA-219ENST00000561092 CC2D2AQ9P2K1 1620 aa35.36■■■■□ 3.25
ETFA-219ENST00000561092 DNAJC5BQ9UF47 199 aa35.33■■■■□ 3.25
ETFA-219ENST00000561092 BAZ1AQ9NRL2 1556 aaPredicted RBP35.33■■■■□ 3.25
ETFA-219ENST00000561092 SMARCA4P51532 1647 aa35.29■■■■□ 3.24
ETFA-219ENST00000561092 MROH2BQ7Z745 1585 aa35.07■■■■□ 3.2
ETFA-219ENST00000561092 SMARCA2P51531 1590 aa35.01■■■■□ 3.2
ETFA-219ENST00000561092 PEG3Q9GZU2 1588 aa34.97■■■■□ 3.19
ETFA-219ENST00000561092 ATAD2BQ9ULI0 1458 aa34.95■■■■□ 3.19
ETFA-219ENST00000561092 NCAPD3P42695 1498 aa34.9■■■■□ 3.18
ETFA-219ENST00000561092 RSF1Q96T23 1441 aaPredicted RBP34.81■■■■□ 3.16
ETFA-219ENST00000561092 HMGXB3Q12766 1538 aa34.81■■■■□ 3.16
ETFA-219ENST00000561092 WIZO95785 1651 aa34.74■■■■□ 3.15
ETFA-219ENST00000561092 BAZ1BQ9UIG0 1483 aaKnown RBP34.71■■■■□ 3.15
ETFA-219ENST00000561092 TOP2AP11388 1531 aaKnown RBP34.44■■■■□ 3.1
ETFA-219ENST00000561092 SUPT5HO00267 1087 aaKnown RBP34.17■■■■□ 3.06
ETFA-219ENST00000561092 CCDC88BA6NC98 1476 aa33.97■■■■□ 3.03
ETFA-219ENST00000561092 LAMC3Q9Y6N6 1575 aa33.97■■■■□ 3.03
ETFA-219ENST00000561092 CADPSQ9ULU8 1353 aa33.88■■■■□ 3.01
ETFA-219ENST00000561092 NESP48681 1621 aa33.85■■■■□ 3.01
ETFA-219ENST00000561092 CFTRP13569 1480 aa33.78■■■■□ 3
ETFA-219ENST00000561092 PDS5BQ9NTI5 1447 aa33.7■■■□□ 2.98
ETFA-219ENST00000561092 PRDM2Q13029 1718 aa33.68■■■□□ 2.98
ETFA-219ENST00000561092 ERCC6Q03468 1493 aa33.64■■■□□ 2.98
ETFA-219ENST00000561092 KIF21AQ7Z4S6 1674 aa33.56■■■□□ 2.96
ETFA-219ENST00000561092 FANCD2Q9BXW9 1451 aa33.5■■■□□ 2.95
ETFA-219ENST00000561092 CEP164Q9UPV0 1460 aa33.44■■■□□ 2.94
ETFA-219ENST00000561092 THOC2Q8NI27 1593 aaKnown RBP33.35■■■□□ 2.93
ETFA-219ENST00000561092 MRC2Q9UBG0 1479 aa33.31■■■□□ 2.92
ETFA-219ENST00000561092 WDR62O43379 1518 aa33.2■■■□□ 2.91
ETFA-219ENST00000561092 CUX2O14529 1486 aa33.19■■■□□ 2.9
ETFA-219ENST00000561092 ABCC8Q09428 1581 aa33.12■■■□□ 2.89
ETFA-219ENST00000561092 URB2Q14146 1524 aaKnown RBP33.12■■■□□ 2.89
ETFA-219ENST00000561092 DNMBPQ6XZF7 1577 aa33.05■■■□□ 2.88
ETFA-219ENST00000561092 TOPBP1Q92547 1522 aa33.01■■■□□ 2.87
ETFA-219ENST00000561092 CUX1P39880 1505 aa32.89■■■□□ 2.86
ETFA-219ENST00000561092 WRNQ14191 1432 aaPredicted RBP eCLIP32.85■■■□□ 2.85
ETFA-219ENST00000561092 BIVM-ERCC5R4GMW8 1640 aa32.79■■■□□ 2.84
ETFA-219ENST00000561092 TOP2BQ02880 1626 aa32.78■■■□□ 2.84
ETFA-219ENST00000561092 POLA1P09884 1462 aaPredicted RBP32.75■■■□□ 2.83
ETFA-219ENST00000561092 SYNJ1O43426 1573 aa32.74■■■□□ 2.83
ETFA-219ENST00000561092 IFT140Q96RY7 1462 aa32.74■■■□□ 2.83
ETFA-219ENST00000561092 FGD5Q6ZNL6 1462 aa32.73■■■□□ 2.83
ETFA-219ENST00000561092 TARBP1Q13395 1621 aaKnown RBP32.64■■■□□ 2.82
ETFA-219ENST00000561092 SOGA1O94964 1423 aa32.61■■■□□ 2.81
ETFA-219ENST00000561092 RAD54L2Q9Y4B4 1467 aa32.55■■■□□ 2.8
ETFA-219ENST00000561092 WDR97A6NE52 1622 aa32.51■■■□□ 2.8
ETFA-219ENST00000561092 ABCA10Q8WWZ4 1543 aa32.46■■■□□ 2.79
ETFA-219ENST00000561092 ZNF608Q9ULD9 1512 aaPredicted RBP32.46■■■□□ 2.79
ETFA-219ENST00000561092 EIF4G3O43432 1585 aaKnown RBP32.44■■■□□ 2.78
ETFA-219ENST00000561092 AQRO60306 1485 aaKnown RBP eCLIP32.34■■■□□ 2.772e-7■□□□□ 10.3
ETFA-219ENST00000561092 TDRD9Q8NDG6 1382 aaKnown RBP32.33■■■□□ 2.77
ETFA-219ENST00000561092 TRIM41Q8WV44 630 aa32.32■■■□□ 2.76
ETFA-219ENST00000561092 ABCA5Q8WWZ7 1642 aa32.31■■■□□ 2.76
ETFA-219ENST00000561092 GAPVD1Q14C86 1478 aa32.27■■■□□ 2.76
ETFA-219ENST00000561092 PBRM1Q86U86 1689 aa32.23■■■□□ 2.75
ETFA-219ENST00000561092 GRIN2BQ13224 1484 aa32.23■■■□□ 2.75
ETFA-219ENST00000561092 KIF27Q86VH2 1401 aa32.16■■■□□ 2.74
ETFA-219ENST00000561092 CHIC1Q5VXU3 224 aa32.14■■■□□ 2.74
ETFA-219ENST00000561092 MAGI1Q96QZ7 1491 aaPredicted RBP32.12■■■□□ 2.73
ETFA-219ENST00000561092 ERICH3Q5RHP9 1530 aa32.11■■■□□ 2.73
ETFA-219ENST00000561092 SNAPC4Q5SXM2 1469 aa32.09■■■□□ 2.73
ETFA-219ENST00000561092 SYNJ2O15056 1496 aa31.97■■■□□ 2.71
ETFA-219ENST00000561092 ADAMTS12P58397 1594 aa31.97■■■□□ 2.71
ETFA-219ENST00000561092 CHD1O14646 1710 aa31.97■■■□□ 2.71
ETFA-219ENST00000561092 CUL7Q14999 1698 aa31.94■■■□□ 2.7
ETFA-219ENST00000561092 FHAD1B1AJZ9 1412 aa31.92■■■□□ 2.7
ETFA-219ENST00000561092 IGF1RP08069 1367 aa31.91■■■□□ 2.7
ETFA-219ENST00000561092 CHMP7Q8WUX9 453 aaPredicted RBP31.88■■■□□ 2.69
ETFA-219ENST00000561092 RUSC2Q8N2Y8 1516 aa31.87■■■□□ 2.69
ETFA-219ENST00000561092 EEA1Q15075 1411 aa31.86■■■□□ 2.69
ETFA-219ENST00000561092 FBLN2P98095 1184 aa31.86■■■□□ 2.69
ETFA-219ENST00000561092 OSCARQ8IYS5 282 aa31.83■■■□□ 2.69
ETFA-219ENST00000561092 GRIN2AQ12879 1464 aa31.8■■■□□ 2.68
ETFA-219ENST00000561092 CARMIL1Q5VZK9 1371 aa31.76■■■□□ 2.67
ETFA-219ENST00000561092 CSRNP3Q8WYN3 585 aa31.66■■■□□ 2.66
ETFA-219ENST00000561092 RAPGEF2Q9Y4G8 1499 aa31.65■■■□□ 2.66
ETFA-219ENST00000561092 NUP160Q12769 1436 aa31.64■■■□□ 2.66
ETFA-219ENST00000561092 PRXQ9BXM0 1461 aa31.61■■■□□ 2.65
ETFA-219ENST00000561092 DNAJC5Q9H3Z4 198 aa31.61■■■□□ 2.65
ETFA-219ENST00000561092 CEP170Q5SW79 1584 aa31.6■■■□□ 2.65
ETFA-219ENST00000561092 CLASP1Q7Z460 1538 aa31.6■■■□□ 2.65
ETFA-219ENST00000561092 FAM9AQ8IZU1 332 aaPredicted RBP31.55■■■□□ 2.64
ETFA-219ENST00000561092 KIF21BO75037 1637 aa31.49■■■□□ 2.63
ETFA-219ENST00000561092 KIAA0586Q9BVV6 1533 aa31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms