RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 NISCHQ9Y2I1 1504 aa29.04■■■□□ 2.24
IRF9-211ENST00000560852 CCDC180Q9P1Z9 1646 aa25.63■■□□□ 1.69
IRF9-211ENST00000560852 ABCC9O60706 1549 aa24.69■■□□□ 1.54
IRF9-211ENST00000560852 ZCCHC6Q5VYS8 1495 aaKnown RBP24.25■■□□□ 1.47
IRF9-211ENST00000560852 MYO15BQ96JP2 1530 aa24.2■■□□□ 1.47
IRF9-211ENST00000560852 DCAF1Q9Y4B6 1507 aa24.16■■□□□ 1.46
IRF9-211ENST00000560852 NACADO15069 1562 aa24.1■■□□□ 1.45
IRF9-211ENST00000560852 RB1CC1Q8TDY2 1594 aa23.97■■□□□ 1.43
IRF9-211ENST00000560852 DCAF8L2P0C7V8 631 aa23.92■■□□□ 1.42
IRF9-211ENST00000560852 UNC13AQ9UPW8 1703 aa23.28■■□□□ 1.32
IRF9-211ENST00000560852 BICRAQ9NZM4 1560 aa23.26■■□□□ 1.31
IRF9-211ENST00000560852 SCRIBQ14160 1630 aa23.25■■□□□ 1.31
IRF9-211ENST00000560852 SHROOM4Q9ULL8 1493 aa23.2■■□□□ 1.3
IRF9-211ENST00000560852 PABPN1Q86U42 306 aaKnown RBP eCLIP23.14■■□□□ 1.29
IRF9-211ENST00000560852 EIF4G1Q04637 1599 aaKnown RBP22.59■■□□□ 1.21
IRF9-211ENST00000560852 CECR2Q9BXF3 1484 aa22.53■■□□□ 1.2
IRF9-211ENST00000560852 DNAJC5BQ9UF47 199 aa22.51■■□□□ 1.19
IRF9-211ENST00000560852 BAZ1AQ9NRL2 1556 aaPredicted RBP22.46■■□□□ 1.19
IRF9-211ENST00000560852 SMARCA4P51532 1647 aa22.39■■□□□ 1.17
IRF9-211ENST00000560852 CC2D2AQ9P2K1 1620 aa22.38■■□□□ 1.17
IRF9-211ENST00000560852 MROH2BQ7Z745 1585 aa22.32■■□□□ 1.16
IRF9-211ENST00000560852 PEG3Q9GZU2 1588 aa22.3■■□□□ 1.16
IRF9-211ENST00000560852 NCAPD3P42695 1498 aa22.3■■□□□ 1.16
IRF9-211ENST00000560852 ATAD2BQ9ULI0 1458 aa22.28■■□□□ 1.16
IRF9-211ENST00000560852 RSF1Q96T23 1441 aaPredicted RBP22.24■■□□□ 1.15
IRF9-211ENST00000560852 SMARCA2P51531 1590 aa22.24■■□□□ 1.15
IRF9-211ENST00000560852 HMGXB3Q12766 1538 aa22.14■■□□□ 1.13
IRF9-211ENST00000560852 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
IRF9-211ENST00000560852 WIZO95785 1651 aa22■■□□□ 1.11
IRF9-211ENST00000560852 TOP2AP11388 1531 aaKnown RBP21.89■■□□□ 1.09
IRF9-211ENST00000560852 SUPT5HO00267 1087 aaKnown RBP21.71■■□□□ 1.07
IRF9-211ENST00000560852 CCDC88BA6NC98 1476 aa21.64■■□□□ 1.06
IRF9-211ENST00000560852 CADPSQ9ULU8 1353 aa21.61■■□□□ 1.05
IRF9-211ENST00000560852 CFTRP13569 1480 aa21.56■■□□□ 1.04
IRF9-211ENST00000560852 LAMC3Q9Y6N6 1575 aa21.56■■□□□ 1.04
IRF9-211ENST00000560852 NESP48681 1621 aa21.46■■□□□ 1.03
IRF9-211ENST00000560852 PDS5BQ9NTI5 1447 aa21.44■■□□□ 1.02
IRF9-211ENST00000560852 FANCD2Q9BXW9 1451 aa21.28■■□□□ 1
IRF9-211ENST00000560852 ERCC6Q03468 1493 aa21.25■□□□□ 0.99
IRF9-211ENST00000560852 CEP164Q9UPV0 1460 aa21.21■□□□□ 0.99
IRF9-211ENST00000560852 PRDM2Q13029 1718 aa21.21■□□□□ 0.99
IRF9-211ENST00000560852 KIF21AQ7Z4S6 1674 aa21.14■□□□□ 0.97
IRF9-211ENST00000560852 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
IRF9-211ENST00000560852 THOC2Q8NI27 1593 aaKnown RBP21.1■□□□□ 0.97
IRF9-211ENST00000560852 ABCC8Q09428 1581 aa21.1■□□□□ 0.97
IRF9-211ENST00000560852 WDR62O43379 1518 aa21.08■□□□□ 0.96
IRF9-211ENST00000560852 CUX2O14529 1486 aa21.07■□□□□ 0.96
IRF9-211ENST00000560852 URB2Q14146 1524 aaKnown RBP21.04■□□□□ 0.96
IRF9-211ENST00000560852 TOPBP1Q92547 1522 aa20.98■□□□□ 0.95
IRF9-211ENST00000560852 DNMBPQ6XZF7 1577 aa20.97■□□□□ 0.95
IRF9-211ENST00000560852 WRNQ14191 1432 aaPredicted RBP eCLIP20.92■□□□□ 0.94
IRF9-211ENST00000560852 CUX1P39880 1505 aa20.91■□□□□ 0.94
IRF9-211ENST00000560852 TOP2BQ02880 1626 aa20.83■□□□□ 0.93
IRF9-211ENST00000560852 POLA1P09884 1462 aaPredicted RBP20.82■□□□□ 0.92
IRF9-211ENST00000560852 IFT140Q96RY7 1462 aa20.81■□□□□ 0.92
IRF9-211ENST00000560852 BIVM-ERCC5R4GMW8 1640 aa20.8■□□□□ 0.92
IRF9-211ENST00000560852 FGD5Q6ZNL6 1462 aa20.78■□□□□ 0.92
IRF9-211ENST00000560852 SYNJ1O43426 1573 aa20.77■□□□□ 0.92
IRF9-211ENST00000560852 SOGA1O94964 1423 aa20.76■□□□□ 0.91
IRF9-211ENST00000560852 TARBP1Q13395 1621 aaKnown RBP20.72■□□□□ 0.91
IRF9-211ENST00000560852 ABCA10Q8WWZ4 1543 aa20.68■□□□□ 0.9
IRF9-211ENST00000560852 RAD54L2Q9Y4B4 1467 aa20.68■□□□□ 0.9
IRF9-211ENST00000560852 WDR97A6NE52 1622 aa20.67■□□□□ 0.9
IRF9-211ENST00000560852 ZNF608Q9ULD9 1512 aaPredicted RBP20.62■□□□□ 0.89
IRF9-211ENST00000560852 TRIM41Q8WV44 630 aa20.59■□□□□ 0.89
IRF9-211ENST00000560852 CHIC1Q5VXU3 224 aa20.58■□□□□ 0.89
IRF9-211ENST00000560852 TDRD9Q8NDG6 1382 aaKnown RBP20.57■□□□□ 0.88
IRF9-211ENST00000560852 AQRO60306 1485 aaKnown RBP eCLIP20.55■□□□□ 0.88
IRF9-211ENST00000560852 GAPVD1Q14C86 1478 aa20.51■□□□□ 0.87
IRF9-211ENST00000560852 ABCA5Q8WWZ7 1642 aa20.5■□□□□ 0.87
IRF9-211ENST00000560852 EIF4G3O43432 1585 aaKnown RBP20.5■□□□□ 0.87
IRF9-211ENST00000560852 GRIN2BQ13224 1484 aa20.5■□□□□ 0.87
IRF9-211ENST00000560852 KIF27Q86VH2 1401 aa20.48■□□□□ 0.87
IRF9-211ENST00000560852 ERICH3Q5RHP9 1530 aa20.43■□□□□ 0.86
IRF9-211ENST00000560852 MAGI1Q96QZ7 1491 aaPredicted RBP20.43■□□□□ 0.86
IRF9-211ENST00000560852 IGF1RP08069 1367 aa20.42■□□□□ 0.86
IRF9-211ENST00000560852 EEA1Q15075 1411 aa20.36■□□□□ 0.85
IRF9-211ENST00000560852 SNAPC4Q5SXM2 1469 aa20.34■□□□□ 0.85
IRF9-211ENST00000560852 FHAD1B1AJZ9 1412 aa20.33■□□□□ 0.84
IRF9-211ENST00000560852 SYNJ2O15056 1496 aa20.32■□□□□ 0.84
IRF9-211ENST00000560852 RUSC2Q8N2Y8 1516 aa20.3■□□□□ 0.84
IRF9-211ENST00000560852 PBRM1Q86U86 1689 aa20.29■□□□□ 0.84
IRF9-211ENST00000560852 CARMIL1Q5VZK9 1371 aa20.25■□□□□ 0.83
IRF9-211ENST00000560852 OSCARQ8IYS5 282 aa20.25■□□□□ 0.83
IRF9-211ENST00000560852 CHMP7Q8WUX9 453 aaPredicted RBP20.25■□□□□ 0.83
IRF9-211ENST00000560852 ADAMTS12P58397 1594 aa20.25■□□□□ 0.83
IRF9-211ENST00000560852 CSRNP3Q8WYN3 585 aa20.24■□□□□ 0.83
IRF9-211ENST00000560852 CUL7Q14999 1698 aa20.22■□□□□ 0.83
IRF9-211ENST00000560852 PRXQ9BXM0 1461 aa20.22■□□□□ 0.83
IRF9-211ENST00000560852 GRIN2AQ12879 1464 aa20.2■□□□□ 0.82
IRF9-211ENST00000560852 NUP160Q12769 1436 aa20.18■□□□□ 0.82
IRF9-211ENST00000560852 FBLN2P98095 1184 aa20.15■□□□□ 0.82
IRF9-211ENST00000560852 RAPGEF2Q9Y4G8 1499 aa20.15■□□□□ 0.82
IRF9-211ENST00000560852 DNAJC5Q9H3Z4 198 aa20.11■□□□□ 0.81
IRF9-211ENST00000560852 CHD1O14646 1710 aa20.1■□□□□ 0.81
IRF9-211ENST00000560852 CLASP1Q7Z460 1538 aa20.07■□□□□ 0.8
IRF9-211ENST00000560852 KIAA0586Q9BVV6 1533 aa20.05■□□□□ 0.8
IRF9-211ENST00000560852 CEP170Q5SW79 1584 aa20.04■□□□□ 0.8
IRF9-211ENST00000560852 KIF21BO75037 1637 aa20.01■□□□□ 0.79
IRF9-211ENST00000560852 FAM9AQ8IZU1 332 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms