RNA–Protein interactions for RNA: ENST00000560390.1

TM2D3-211, Transcript of TM2 domain containing 3, humanhuman

Gene TM2D3, Length 3,102 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-211ENST00000560390 NISCHQ9Y2I1 1504 aa12.91□□□□□ -0.34
TM2D3-211ENST00000560390 CCDC180Q9P1Z9 1646 aa11.28□□□□□ -0.6
TM2D3-211ENST00000560390 ABCC9O60706 1549 aa11.01□□□□□ -0.65
TM2D3-211ENST00000560390 DCAF8L2P0C7V8 631 aa10.93□□□□□ -0.66
TM2D3-211ENST00000560390 ZCCHC6Q5VYS8 1495 aaKnown RBP10.78□□□□□ -0.68
TM2D3-211ENST00000560390 AEBP2Q6ZN18 517 aaPredicted RBP10.78□□□□□ -0.68
TM2D3-211ENST00000560390 DCAF1Q9Y4B6 1507 aa10.62□□□□□ -0.71
TM2D3-211ENST00000560390 NACADO15069 1562 aa10.61□□□□□ -0.71
TM2D3-211ENST00000560390 RB1CC1Q8TDY2 1594 aa10.59□□□□□ -0.71
TM2D3-211ENST00000560390 MYO15BQ96JP2 1530 aa10.57□□□□□ -0.72
TM2D3-211ENST00000560390 SHROOM4Q9ULL8 1493 aa10.51□□□□□ -0.73
TM2D3-211ENST00000560390 SCRIBQ14160 1630 aa10.43□□□□□ -0.74
TM2D3-211ENST00000560390 PABPN1Q86U42 306 aaKnown RBP eCLIP10.39□□□□□ -0.75
TM2D3-211ENST00000560390 UNC13AQ9UPW8 1703 aa10.28□□□□□ -0.76
TM2D3-211ENST00000560390 BICRAQ9NZM4 1560 aa10.24□□□□□ -0.77
TM2D3-211ENST00000560390 CHIC1Q5VXU3 224 aa10.16□□□□□ -0.78
TM2D3-211ENST00000560390 CECR2Q9BXF3 1484 aa10.08□□□□□ -0.8
TM2D3-211ENST00000560390 POTEDQ86YR6 584 aa10.07□□□□□ -0.8
TM2D3-211ENST00000560390 SUPT5HO00267 1087 aaKnown RBP10.03□□□□□ -0.8
TM2D3-211ENST00000560390 BAZ1AQ9NRL2 1556 aaPredicted RBP9.99□□□□□ -0.81
TM2D3-211ENST00000560390 EIF4G1Q04637 1599 aaKnown RBP9.98□□□□□ -0.81
TM2D3-211ENST00000560390 MROH2BQ7Z745 1585 aa9.97□□□□□ -0.81
TM2D3-211ENST00000560390 RSF1Q96T23 1441 aaPredicted RBP9.96□□□□□ -0.82
TM2D3-211ENST00000560390 SMARCA4P51532 1647 aa9.95□□□□□ -0.82
TM2D3-211ENST00000560390 DNAJC5BQ9UF47 199 aa9.92□□□□□ -0.82
TM2D3-211ENST00000560390 CC2D2AQ9P2K1 1620 aa9.89□□□□□ -0.83
TM2D3-211ENST00000560390 ATAD2BQ9ULI0 1458 aa9.87□□□□□ -0.83
TM2D3-211ENST00000560390 WIZO95785 1651 aa9.86□□□□□ -0.83
TM2D3-211ENST00000560390 SMARCA2P51531 1590 aa9.85□□□□□ -0.83
TM2D3-211ENST00000560390 BAZ1BQ9UIG0 1483 aaKnown RBP9.83□□□□□ -0.84
TM2D3-211ENST00000560390 NCAPD3P42695 1498 aa9.82□□□□□ -0.84
TM2D3-211ENST00000560390 PEG3Q9GZU2 1588 aa9.8□□□□□ -0.84
TM2D3-211ENST00000560390 HMGXB3Q12766 1538 aa9.75□□□□□ -0.85
TM2D3-211ENST00000560390 TOP2AP11388 1531 aaKnown RBP9.75□□□□□ -0.85
TM2D3-211ENST00000560390 CCDC88BA6NC98 1476 aa9.68□□□□□ -0.86
TM2D3-211ENST00000560390 CADPSQ9ULU8 1353 aa9.59□□□□□ -0.87
TM2D3-211ENST00000560390 NESP48681 1621 aa9.57□□□□□ -0.88
TM2D3-211ENST00000560390 CFTRP13569 1480 aa9.55□□□□□ -0.88
TM2D3-211ENST00000560390 LAMC3Q9Y6N6 1575 aa9.5□□□□□ -0.89
TM2D3-211ENST00000560390 PDS5BQ9NTI5 1447 aa9.5□□□□□ -0.89
TM2D3-211ENST00000560390 ERCC6Q03468 1493 aa9.48□□□□□ -0.89
TM2D3-211ENST00000560390 FANCD2Q9BXW9 1451 aa9.47□□□□□ -0.89
TM2D3-211ENST00000560390 CEP164Q9UPV0 1460 aa9.44□□□□□ -0.9
TM2D3-211ENST00000560390 SENP3Q9H4L4 574 aaPredicted RBP9.43□□□□□ -0.9
TM2D3-211ENST00000560390 TRIM41Q8WV44 630 aa9.42□□□□□ -0.9
TM2D3-211ENST00000560390 ABCC8Q09428 1581 aa9.42□□□□□ -0.9
TM2D3-211ENST00000560390 WRNQ14191 1432 aaPredicted RBP eCLIP9.4□□□□□ -0.9
TM2D3-211ENST00000560390 KIF21AQ7Z4S6 1674 aa9.38□□□□□ -0.91
TM2D3-211ENST00000560390 PRDM2Q13029 1718 aa9.36□□□□□ -0.91
TM2D3-211ENST00000560390 MRC2Q9UBG0 1479 aa9.35□□□□□ -0.91
TM2D3-211ENST00000560390 URB2Q14146 1524 aaKnown RBP9.34□□□□□ -0.91
TM2D3-211ENST00000560390 SLC24A1O60721 1099 aa9.34□□□□□ -0.92
TM2D3-211ENST00000560390 CUX1P39880 1505 aa9.33□□□□□ -0.92
TM2D3-211ENST00000560390 TOPBP1Q92547 1522 aa9.33□□□□□ -0.92
TM2D3-211ENST00000560390 SYNJ1O43426 1573 aa9.32□□□□□ -0.92
TM2D3-211ENST00000560390 DNMBPQ6XZF7 1577 aa9.3□□□□□ -0.92
TM2D3-211ENST00000560390 FGD5Q6ZNL6 1462 aa9.29□□□□□ -0.92
TM2D3-211ENST00000560390 FAM9AQ8IZU1 332 aaPredicted RBP9.29□□□□□ -0.92
TM2D3-211ENST00000560390 TOP2BQ02880 1626 aa9.28□□□□□ -0.92
TM2D3-211ENST00000560390 THOC2Q8NI27 1593 aaKnown RBP9.28□□□□□ -0.92
TM2D3-211ENST00000560390 POLA1P09884 1462 aaPredicted RBP9.28□□□□□ -0.92
TM2D3-211ENST00000560390 WDR62O43379 1518 aa9.27□□□□□ -0.92
TM2D3-211ENST00000560390 SOGA1O94964 1423 aa9.27□□□□□ -0.93
TM2D3-211ENST00000560390 RAD54L2Q9Y4B4 1467 aa9.26□□□□□ -0.93
TM2D3-211ENST00000560390 PCGF6Q9BYE7 350 aa9.26□□□□□ -0.93
TM2D3-211ENST00000560390 BIVM-ERCC5R4GMW8 1640 aa9.24□□□□□ -0.93
TM2D3-211ENST00000560390 HRCP23327 699 aa9.24□□□□□ -0.93
TM2D3-211ENST00000560390 TDRD9Q8NDG6 1382 aaKnown RBP9.23□□□□□ -0.93
TM2D3-211ENST00000560390 CUX2O14529 1486 aa9.23□□□□□ -0.93
TM2D3-211ENST00000560390 PPARGC1BQ86YN6 1023 aaKnown RBP9.21□□□□□ -0.93
TM2D3-211ENST00000560390 IFT140Q96RY7 1462 aa9.2□□□□□ -0.94
TM2D3-211ENST00000560390 EHMT2Q96KQ7 1210 aa9.2□□□□□ -0.94
TM2D3-211ENST00000560390 KIF27Q86VH2 1401 aa9.19□□□□□ -0.94
TM2D3-211ENST00000560390 AQRO60306 1485 aaKnown RBP eCLIP9.19□□□□□ -0.94
TM2D3-211ENST00000560390 ZNF608Q9ULD9 1512 aaPredicted RBP9.19□□□□□ -0.94
TM2D3-211ENST00000560390 RUSC2Q8N2Y8 1516 aa9.18□□□□□ -0.94
TM2D3-211ENST00000560390 ABCA10Q8WWZ4 1543 aa9.18□□□□□ -0.94
TM2D3-211ENST00000560390 PHF23Q9BUL5 403 aaPredicted RBP9.18□□□□□ -0.94
TM2D3-211ENST00000560390 TARBP1Q13395 1621 aaKnown RBP9.16□□□□□ -0.94
TM2D3-211ENST00000560390 CSRNP3Q8WYN3 585 aa9.16□□□□□ -0.94
TM2D3-211ENST00000560390 GAPVD1Q14C86 1478 aa9.15□□□□□ -0.94
TM2D3-211ENST00000560390 LOC105371045A0A1W2PR82 267 aa9.15□□□□□ -0.95
TM2D3-211ENST00000560390 FBLN2P98095 1184 aa9.14□□□□□ -0.95
TM2D3-211ENST00000560390 EEA1Q15075 1411 aa9.12□□□□□ -0.95
TM2D3-211ENST00000560390 IGF1RP08069 1367 aa9.12□□□□□ -0.95
TM2D3-211ENST00000560390 GRIN2BQ13224 1484 aa9.11□□□□□ -0.95
TM2D3-211ENST00000560390 EIF4G3O43432 1585 aaKnown RBP9.1□□□□□ -0.95
TM2D3-211ENST00000560390 CHMP7Q8WUX9 453 aaPredicted RBP9.09□□□□□ -0.95
TM2D3-211ENST00000560390 CARMIL1Q5VZK9 1371 aa9.09□□□□□ -0.95
TM2D3-211ENST00000560390 WDR97A6NE52 1622 aa9.09□□□□□ -0.95
TM2D3-211ENST00000560390 UBTFP17480 764 aaKnown RBP9.08□□□□□ -0.96
TM2D3-211ENST00000560390 ABCA5Q8WWZ7 1642 aa9.08□□□□□ -0.96
TM2D3-211ENST00000560390 SNAPC4Q5SXM2 1469 aa9.07□□□□□ -0.96
TM2D3-211ENST00000560390 ERICH3Q5RHP9 1530 aa9.06□□□□□ -0.96
TM2D3-211ENST00000560390 RANGAP1P46060 587 aaPredicted RBP9.05□□□□□ -0.96
TM2D3-211ENST00000560390 FHAD1B1AJZ9 1412 aa9.04□□□□□ -0.96
TM2D3-211ENST00000560390 MAGI1Q96QZ7 1491 aaPredicted RBP9.04□□□□□ -0.96
TM2D3-211ENST00000560390 RAPGEF2Q9Y4G8 1499 aa9.03□□□□□ -0.96
TM2D3-211ENST00000560390 PRXQ9BXM0 1461 aa9.03□□□□□ -0.96
TM2D3-211ENST00000560390 PBRM1Q86U86 1689 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms