RNA–Protein interactions for RNA: ENST00000560220.5

KNSTRN-209, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 5

Gene KNSTRN, Length 903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-209ENST00000560220 NISCHQ9Y2I1 1504 aa25.88■■□□□ 1.73
KNSTRN-209ENST00000560220 ABCC9O60706 1549 aa25.56■■□□□ 1.68
KNSTRN-209ENST00000560220 DNAJC5BQ9UF47 199 aa25.43■■□□□ 1.66
KNSTRN-209ENST00000560220 DNAJC5Q9H3Z4 198 aa24.57■■□□□ 1.52
KNSTRN-209ENST00000560220 CCDC180Q9P1Z9 1646 aa23.91■■□□□ 1.42
KNSTRN-209ENST00000560220 RB1CC1Q8TDY2 1594 aa23.59■■□□□ 1.37
KNSTRN-209ENST00000560220 PABPN1Q86U42 306 aaKnown RBP eCLIP23.58■■□□□ 1.37
KNSTRN-209ENST00000560220 CECR2Q9BXF3 1484 aa23.19■■□□□ 1.3
KNSTRN-209ENST00000560220 NACADO15069 1562 aa23.01■■□□□ 1.27
KNSTRN-209ENST00000560220 UNC13AQ9UPW8 1703 aa23.01■■□□□ 1.27
KNSTRN-209ENST00000560220 CC2D2AQ9P2K1 1620 aa22.98■■□□□ 1.27
KNSTRN-209ENST00000560220 BICRAQ9NZM4 1560 aa22.92■■□□□ 1.26
KNSTRN-209ENST00000560220 TRIM41Q8WV44 630 aa22.87■■□□□ 1.25
KNSTRN-209ENST00000560220 DCAF8L2P0C7V8 631 aa22.73■■□□□ 1.23
KNSTRN-209ENST00000560220 CUX2O14529 1486 aa22.67■■□□□ 1.22
KNSTRN-209ENST00000560220 EIF4G1Q04637 1599 aaKnown RBP22.52■■□□□ 1.2
KNSTRN-209ENST00000560220 SHROOM4Q9ULL8 1493 aa22.43■■□□□ 1.18
KNSTRN-209ENST00000560220 ERCC6Q03468 1493 aa22.21■■□□□ 1.15
KNSTRN-209ENST00000560220 MYO15BQ96JP2 1530 aa22.12■■□□□ 1.13
KNSTRN-209ENST00000560220 AEBP2Q6ZN18 517 aaPredicted RBP22.01■■□□□ 1.11
KNSTRN-209ENST00000560220 SCRIBQ14160 1630 aa21.78■■□□□ 1.08
KNSTRN-209ENST00000560220 THOC2Q8NI27 1593 aaKnown RBP21.53■■□□□ 1.04
KNSTRN-209ENST00000560220 NESP48681 1621 aa21.47■■□□□ 1.03
KNSTRN-209ENST00000560220 OSCARQ8IYS5 282 aa21.46■■□□□ 1.03
KNSTRN-209ENST00000560220 TRHP20396 242 aaPredicted RBP21.41■■□□□ 1.02
KNSTRN-209ENST00000560220 ILDR1Q86SU0 546 aaPredicted RBP21.34■■□□□ 1.01
KNSTRN-209ENST00000560220 BAZ1AQ9NRL2 1556 aaPredicted RBP21.34■■□□□ 1.01
KNSTRN-209ENST00000560220 SMARCA2P51531 1590 aa21.29■■□□□ 1
KNSTRN-209ENST00000560220 NCAPD3P42695 1498 aa21.27■■□□□ 1
KNSTRN-209ENST00000560220 RIMBP3CA6NJZ7 1639 aa21.27■■□□□ 1
KNSTRN-209ENST00000560220 RIMBP3BA6NNM3 1639 aa21.27■■□□□ 1
KNSTRN-209ENST00000560220 RIMBP3Q9UFD9 1639 aa21.27■■□□□ 1
KNSTRN-209ENST00000560220 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
KNSTRN-209ENST00000560220 KIF21AQ7Z4S6 1674 aa21.12■□□□□ 0.97
KNSTRN-209ENST00000560220 CYB5RLQ6IPT4 315 aa21.08■□□□□ 0.97
KNSTRN-209ENST00000560220 ZCCHC6Q5VYS8 1495 aaKnown RBP21.07■□□□□ 0.96
KNSTRN-209ENST00000560220 LAMC3Q9Y6N6 1575 aa21.06■□□□□ 0.96
KNSTRN-209ENST00000560220 PDS5BQ9NTI5 1447 aa21.04■□□□□ 0.96
KNSTRN-209ENST00000560220 ARHGEF11O15085 1522 aa21.03■□□□□ 0.96
KNSTRN-209ENST00000560220 ATAD2BQ9ULI0 1458 aa20.98■□□□□ 0.95
KNSTRN-209ENST00000560220 HMGXB3Q12766 1538 aa20.93■□□□□ 0.94
KNSTRN-209ENST00000560220 MRC2Q9UBG0 1479 aa20.91■□□□□ 0.94
KNSTRN-209ENST00000560220 WDR62O43379 1518 aa20.88■□□□□ 0.93
KNSTRN-209ENST00000560220 ARAP1Q96P48 1450 aa20.7■□□□□ 0.9
KNSTRN-209ENST00000560220 BAZ1BQ9UIG0 1483 aaKnown RBP20.7■□□□□ 0.9
KNSTRN-209ENST00000560220 CADPSQ9ULU8 1353 aa20.58■□□□□ 0.88
KNSTRN-209ENST00000560220 SMARCA4P51532 1647 aa20.53■□□□□ 0.88
KNSTRN-209ENST00000560220 CEP164Q9UPV0 1460 aa20.5■□□□□ 0.87
KNSTRN-209ENST00000560220 RSF1Q96T23 1441 aaPredicted RBP20.4■□□□□ 0.86
KNSTRN-209ENST00000560220 FANCD2Q9BXW9 1451 aa20.34■□□□□ 0.85
KNSTRN-209ENST00000560220 PEG3Q9GZU2 1588 aa20.31■□□□□ 0.84
KNSTRN-209ENST00000560220 ZNF608Q9ULD9 1512 aaPredicted RBP20.28■□□□□ 0.84
KNSTRN-209ENST00000560220 KDM4FA0A1W2PPD8 638 aa20.27■□□□□ 0.84
KNSTRN-209ENST00000560220 URB2Q14146 1524 aaKnown RBP20.25■□□□□ 0.83
KNSTRN-209ENST00000560220 CHD1O14646 1710 aa20.23■□□□□ 0.83
KNSTRN-209ENST00000560220 FBLN2P98095 1184 aa20.21■□□□□ 0.83
KNSTRN-209ENST00000560220 FBXO41Q8TF61 875 aa20.19■□□□□ 0.82
KNSTRN-209ENST00000560220 LMTK3Q96Q04 1460 aa20.16■□□□□ 0.82
KNSTRN-209ENST00000560220 IFT140Q96RY7 1462 aa20.16■□□□□ 0.82
KNSTRN-209ENST00000560220 ERCC6L2Q5T890 1561 aa20.09■□□□□ 0.81
KNSTRN-209ENST00000560220 SOCS7O14512 581 aa20.08■□□□□ 0.81
KNSTRN-209ENST00000560220 EIF4G3O43432 1585 aaKnown RBP20.07■□□□□ 0.8
KNSTRN-209ENST00000560220 CFTRP13569 1480 aa19.97■□□□□ 0.79
KNSTRN-209ENST00000560220 CLASP1Q7Z460 1538 aa19.94■□□□□ 0.78
KNSTRN-209ENST00000560220 HECW2Q9P2P5 1572 aa19.94■□□□□ 0.78
KNSTRN-209ENST00000560220 MROH2BQ7Z745 1585 aa19.93■□□□□ 0.78
KNSTRN-209ENST00000560220 AQRO60306 1485 aaKnown RBP eCLIP19.92■□□□□ 0.786e-7■■■■□ 20.4
KNSTRN-209ENST00000560220 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
KNSTRN-209ENST00000560220 ILDR2Q71H61 639 aa19.89■□□□□ 0.77
KNSTRN-209ENST00000560220 KIF13AQ9H1H9 1805 aa19.86■□□□□ 0.77
KNSTRN-209ENST00000560220 SYNJ1O43426 1573 aa19.83■□□□□ 0.76
KNSTRN-209ENST00000560220 CHMP7Q8WUX9 453 aaPredicted RBP19.77■□□□□ 0.76
KNSTRN-209ENST00000560220 TOPBP1Q92547 1522 aa19.76■□□□□ 0.75
KNSTRN-209ENST00000560220 KDM6BO15054 1643 aa19.73■□□□□ 0.75
KNSTRN-209ENST00000560220 DISP3Q9P2K9 1392 aa19.73■□□□□ 0.75
KNSTRN-209ENST00000560220 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
KNSTRN-209ENST00000560220 ADGRL1O94910 1474 aa19.69■□□□□ 0.74
KNSTRN-209ENST00000560220 FAM69CQ0P6D2 419 aa19.69■□□□□ 0.74
KNSTRN-209ENST00000560220 TARBP1Q13395 1621 aaKnown RBP19.68■□□□□ 0.74
KNSTRN-209ENST00000560220 SNAPC4Q5SXM2 1469 aa19.65■□□□□ 0.74
KNSTRN-209ENST00000560220 ABCC8Q09428 1581 aa19.64■□□□□ 0.73
KNSTRN-209ENST00000560220 WIZO95785 1651 aa19.62■□□□□ 0.73
KNSTRN-209ENST00000560220 PRDM2Q13029 1718 aa19.59■□□□□ 0.73
KNSTRN-209ENST00000560220 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
KNSTRN-209ENST00000560220 ABCC10Q5T3U5 1492 aa19.55■□□□□ 0.72
KNSTRN-209ENST00000560220 DNMBPQ6XZF7 1577 aa19.53■□□□□ 0.72
KNSTRN-209ENST00000560220 MAGI1Q96QZ7 1491 aaPredicted RBP19.52■□□□□ 0.72
KNSTRN-209ENST00000560220 POLA1P09884 1462 aaPredicted RBP19.45■□□□□ 0.7
KNSTRN-209ENST00000560220 RAD54L2Q9Y4B4 1467 aa19.43■□□□□ 0.7
KNSTRN-209ENST00000560220 DIP2BQ9P265 1576 aa19.43■□□□□ 0.7
KNSTRN-209ENST00000560220 TSPOAP1O95153 1857 aa19.42■□□□□ 0.7
KNSTRN-209ENST00000560220 NPM1P06748 294 aaKnown RBP eCLIP19.41■□□□□ 0.7
KNSTRN-209ENST00000560220 SOGA1O94964 1423 aa19.39■□□□□ 0.69
KNSTRN-209ENST00000560220 GRIN2BQ13224 1484 aa19.37■□□□□ 0.69
KNSTRN-209ENST00000560220 WDR97A6NE52 1622 aa19.36■□□□□ 0.69
KNSTRN-209ENST00000560220 CEP170Q5SW79 1584 aa19.34■□□□□ 0.69
KNSTRN-209ENST00000560220 MAPKBP1O60336 1514 aa19.32■□□□□ 0.68
KNSTRN-209ENST00000560220 SPATA31D1Q6ZQQ2 1576 aa19.3■□□□□ 0.68
KNSTRN-209ENST00000560220 TOP2AP11388 1531 aaKnown RBP19.24■□□□□ 0.67
KNSTRN-209ENST00000560220 TOP2BQ02880 1626 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms