RNA–Protein interactions for RNA: ENST00000560106.5

PCK2-212, Transcript of phosphoenolpyruvate carboxykinase 2, mitochondrial, humanhuman

TSL 5

Gene PCK2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCK2-212ENST00000560106 NISCHQ9Y2I1 1504 aa29.09■■■□□ 2.25
PCK2-212ENST00000560106 CCDC180Q9P1Z9 1646 aa25.77■■□□□ 1.72
PCK2-212ENST00000560106 ABCC9O60706 1549 aa24.88■■□□□ 1.57
PCK2-212ENST00000560106 DCAF8L2P0C7V8 631 aa24.32■■□□□ 1.48
PCK2-212ENST00000560106 ZCCHC6Q5VYS8 1495 aaKnown RBP24.26■■□□□ 1.47
PCK2-212ENST00000560106 NACADO15069 1562 aa24.2■■□□□ 1.46
PCK2-212ENST00000560106 RB1CC1Q8TDY2 1594 aa24.16■■□□□ 1.46
PCK2-212ENST00000560106 MYO15BQ96JP2 1530 aa24.14■■□□□ 1.45
PCK2-212ENST00000560106 DCAF1Q9Y4B6 1507 aa24.12■■□□□ 1.45
PCK2-212ENST00000560106 UNC13AQ9UPW8 1703 aa23.48■■□□□ 1.35
PCK2-212ENST00000560106 SCRIBQ14160 1630 aa23.48■■□□□ 1.35
PCK2-212ENST00000560106 PABPN1Q86U42 306 aaKnown RBP eCLIP23.31■■□□□ 1.32
PCK2-212ENST00000560106 BICRAQ9NZM4 1560 aa23.25■■□□□ 1.31
PCK2-212ENST00000560106 SHROOM4Q9ULL8 1493 aa23.22■■□□□ 1.31
PCK2-212ENST00000560106 EIF4G1Q04637 1599 aaKnown RBP22.69■■□□□ 1.22
PCK2-212ENST00000560106 BAZ1AQ9NRL2 1556 aaPredicted RBP22.59■■□□□ 1.21
PCK2-212ENST00000560106 CECR2Q9BXF3 1484 aa22.54■■□□□ 1.2
PCK2-212ENST00000560106 CC2D2AQ9P2K1 1620 aa22.53■■□□□ 1.2
PCK2-212ENST00000560106 SMARCA4P51532 1647 aa22.5■■□□□ 1.19
PCK2-212ENST00000560106 DNAJC5BQ9UF47 199 aa22.47■■□□□ 1.19
PCK2-212ENST00000560106 SMARCA2P51531 1590 aa22.38■■□□□ 1.17
PCK2-212ENST00000560106 MROH2BQ7Z745 1585 aa22.37■■□□□ 1.17
PCK2-212ENST00000560106 ATAD2BQ9ULI0 1458 aa22.31■■□□□ 1.16
PCK2-212ENST00000560106 NCAPD3P42695 1498 aa22.28■■□□□ 1.16
PCK2-212ENST00000560106 PEG3Q9GZU2 1588 aa22.28■■□□□ 1.16
PCK2-212ENST00000560106 RSF1Q96T23 1441 aaPredicted RBP22.25■■□□□ 1.15
PCK2-212ENST00000560106 BAZ1BQ9UIG0 1483 aaKnown RBP22.21■■□□□ 1.15
PCK2-212ENST00000560106 HMGXB3Q12766 1538 aa22.21■■□□□ 1.15
PCK2-212ENST00000560106 WIZO95785 1651 aa22.15■■□□□ 1.14
PCK2-212ENST00000560106 SUPT5HO00267 1087 aaKnown RBP22■■□□□ 1.11
PCK2-212ENST00000560106 TOP2AP11388 1531 aaKnown RBP21.99■■□□□ 1.11
PCK2-212ENST00000560106 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
PCK2-212ENST00000560106 LAMC3Q9Y6N6 1575 aa21.68■■□□□ 1.06
PCK2-212ENST00000560106 CADPSQ9ULU8 1353 aa21.67■■□□□ 1.06
PCK2-212ENST00000560106 PDS5BQ9NTI5 1447 aa21.58■■□□□ 1.05
PCK2-212ENST00000560106 CFTRP13569 1480 aa21.57■■□□□ 1.04
PCK2-212ENST00000560106 NESP48681 1621 aa21.56■■□□□ 1.04
PCK2-212ENST00000560106 ERCC6Q03468 1493 aa21.54■■□□□ 1.04
PCK2-212ENST00000560106 PRDM2Q13029 1718 aa21.46■■□□□ 1.03
PCK2-212ENST00000560106 FANCD2Q9BXW9 1451 aa21.4■■□□□ 1.02
PCK2-212ENST00000560106 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.01
PCK2-212ENST00000560106 KIF21AQ7Z4S6 1674 aa21.35■■□□□ 1.01
PCK2-212ENST00000560106 MRC2Q9UBG0 1479 aa21.26■□□□□ 0.99
PCK2-212ENST00000560106 ABCC8Q09428 1581 aa21.23■□□□□ 0.99
PCK2-212ENST00000560106 THOC2Q8NI27 1593 aaKnown RBP21.19■□□□□ 0.98
PCK2-212ENST00000560106 CUX2O14529 1486 aa21.18■□□□□ 0.98
PCK2-212ENST00000560106 WDR62O43379 1518 aa21.14■□□□□ 0.98
PCK2-212ENST00000560106 DNMBPQ6XZF7 1577 aa21.1■□□□□ 0.97
PCK2-212ENST00000560106 URB2Q14146 1524 aaKnown RBP21.09■□□□□ 0.97
PCK2-212ENST00000560106 TOPBP1Q92547 1522 aa21.07■□□□□ 0.96
PCK2-212ENST00000560106 WRNQ14191 1432 aaPredicted RBP eCLIP21.04■□□□□ 0.96
PCK2-212ENST00000560106 CUX1P39880 1505 aa20.98■□□□□ 0.95
PCK2-212ENST00000560106 IFT140Q96RY7 1462 aa20.93■□□□□ 0.94
PCK2-212ENST00000560106 TOP2BQ02880 1626 aa20.93■□□□□ 0.94
PCK2-212ENST00000560106 BIVM-ERCC5R4GMW8 1640 aa20.91■□□□□ 0.94
PCK2-212ENST00000560106 POLA1P09884 1462 aaPredicted RBP20.9■□□□□ 0.94
PCK2-212ENST00000560106 FGD5Q6ZNL6 1462 aa20.9■□□□□ 0.94
PCK2-212ENST00000560106 SOGA1O94964 1423 aa20.89■□□□□ 0.94
PCK2-212ENST00000560106 SYNJ1O43426 1573 aa20.86■□□□□ 0.93
PCK2-212ENST00000560106 TRIM41Q8WV44 630 aa20.84■□□□□ 0.93
PCK2-212ENST00000560106 RAD54L2Q9Y4B4 1467 aa20.78■□□□□ 0.92
PCK2-212ENST00000560106 TARBP1Q13395 1621 aaKnown RBP20.78■□□□□ 0.92
PCK2-212ENST00000560106 WDR97A6NE52 1622 aa20.76■□□□□ 0.91
PCK2-212ENST00000560106 ABCA10Q8WWZ4 1543 aa20.73■□□□□ 0.91
PCK2-212ENST00000560106 TDRD9Q8NDG6 1382 aaKnown RBP20.69■□□□□ 0.9
PCK2-212ENST00000560106 ZNF608Q9ULD9 1512 aaPredicted RBP20.68■□□□□ 0.9
PCK2-212ENST00000560106 CHIC1Q5VXU3 224 aa20.66■□□□□ 0.9
PCK2-212ENST00000560106 AQRO60306 1485 aaKnown RBP eCLIP20.66■□□□□ 0.98e-7■■■■■ 31.3
PCK2-212ENST00000560106 EIF4G3O43432 1585 aaKnown RBP20.66■□□□□ 0.9
PCK2-212ENST00000560106 GAPVD1Q14C86 1478 aa20.65■□□□□ 0.9
PCK2-212ENST00000560106 KIF27Q86VH2 1401 aa20.63■□□□□ 0.89
PCK2-212ENST00000560106 GRIN2BQ13224 1484 aa20.61■□□□□ 0.89
PCK2-212ENST00000560106 ABCA5Q8WWZ7 1642 aa20.58■□□□□ 0.89
PCK2-212ENST00000560106 MAGI1Q96QZ7 1491 aaPredicted RBP20.54■□□□□ 0.88
PCK2-212ENST00000560106 PBRM1Q86U86 1689 aa20.54■□□□□ 0.88
PCK2-212ENST00000560106 ERICH3Q5RHP9 1530 aa20.53■□□□□ 0.88
PCK2-212ENST00000560106 CHMP7Q8WUX9 453 aaPredicted RBP20.49■□□□□ 0.87
PCK2-212ENST00000560106 FBLN2P98095 1184 aa20.48■□□□□ 0.87
PCK2-212ENST00000560106 SNAPC4Q5SXM2 1469 aa20.48■□□□□ 0.87
PCK2-212ENST00000560106 EEA1Q15075 1411 aa20.47■□□□□ 0.87
PCK2-212ENST00000560106 SYNJ2O15056 1496 aa20.43■□□□□ 0.86
PCK2-212ENST00000560106 IGF1RP08069 1367 aa20.43■□□□□ 0.86
PCK2-212ENST00000560106 FHAD1B1AJZ9 1412 aa20.43■□□□□ 0.86
PCK2-212ENST00000560106 OSCARQ8IYS5 282 aa20.42■□□□□ 0.86
PCK2-212ENST00000560106 CUL7Q14999 1698 aa20.41■□□□□ 0.86
PCK2-212ENST00000560106 ADAMTS12P58397 1594 aa20.37■□□□□ 0.85
PCK2-212ENST00000560106 CARMIL1Q5VZK9 1371 aa20.36■□□□□ 0.85
PCK2-212ENST00000560106 CSRNP3Q8WYN3 585 aa20.36■□□□□ 0.85
PCK2-212ENST00000560106 CHD1O14646 1710 aa20.35■□□□□ 0.85
PCK2-212ENST00000560106 RUSC2Q8N2Y8 1516 aa20.34■□□□□ 0.85
PCK2-212ENST00000560106 GRIN2AQ12879 1464 aa20.31■□□□□ 0.84
PCK2-212ENST00000560106 FAM9AQ8IZU1 332 aaPredicted RBP20.31■□□□□ 0.84
PCK2-212ENST00000560106 RAPGEF2Q9Y4G8 1499 aa20.28■□□□□ 0.84
PCK2-212ENST00000560106 PRXQ9BXM0 1461 aa20.21■□□□□ 0.83
PCK2-212ENST00000560106 NUP160Q12769 1436 aa20.19■□□□□ 0.82
PCK2-212ENST00000560106 DNAJC5Q9H3Z4 198 aa20.16■□□□□ 0.82
PCK2-212ENST00000560106 KIF21BO75037 1637 aa20.13■□□□□ 0.81
PCK2-212ENST00000560106 CEP170Q5SW79 1584 aa20.13■□□□□ 0.81
PCK2-212ENST00000560106 KIAA0586Q9BVV6 1533 aa20.12■□□□□ 0.81
PCK2-212ENST00000560106 CLASP1Q7Z460 1538 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms