RNA–Protein interactions for RNA: ENST00000559591.5

KNSTRN-207, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-207ENST00000559591 AEBP2Q6ZN18 517 aaPredicted RBP28.7■■■□□ 2.18
KNSTRN-207ENST00000559591 CHIC1Q5VXU3 224 aa26.94■■□□□ 1.9
KNSTRN-207ENST00000559591 NISCHQ9Y2I1 1504 aa24.86■■□□□ 1.57
KNSTRN-207ENST00000559591 SENP3Q9H4L4 574 aaPredicted RBP24.66■■□□□ 1.54
KNSTRN-207ENST00000559591 ABCC9O60706 1549 aa24.49■■□□□ 1.51
KNSTRN-207ENST00000559591 DNAJC5BQ9UF47 199 aa24.27■■□□□ 1.48
KNSTRN-207ENST00000559591 PHF23Q9BUL5 403 aaPredicted RBP24.24■■□□□ 1.47
KNSTRN-207ENST00000559591 DNAJC5Q9H3Z4 198 aa23.38■■□□□ 1.33
KNSTRN-207ENST00000559591 FOXD1Q16676 465 aa23■■□□□ 1.27
KNSTRN-207ENST00000559591 CCDC180Q9P1Z9 1646 aa22.96■■□□□ 1.27
KNSTRN-207ENST00000559591 RB1CC1Q8TDY2 1594 aa22.6■■□□□ 1.21
KNSTRN-207ENST00000559591 PABPN1Q86U42 306 aaKnown RBP eCLIP22.56■■□□□ 1.2
KNSTRN-207ENST00000559591 CECR2Q9BXF3 1484 aa22.21■■□□□ 1.15
KNSTRN-207ENST00000559591 POTEDQ86YR6 584 aa22.11■■□□□ 1.13
KNSTRN-207ENST00000559591 UNC13AQ9UPW8 1703 aa22.08■■□□□ 1.12
KNSTRN-207ENST00000559591 NACADO15069 1562 aa22.06■■□□□ 1.12
KNSTRN-207ENST00000559591 CC2D2AQ9P2K1 1620 aa22.02■■□□□ 1.11
KNSTRN-207ENST00000559591 BICRAQ9NZM4 1560 aa21.99■■□□□ 1.11
KNSTRN-207ENST00000559591 TRIM41Q8WV44 630 aa21.81■■□□□ 1.08
KNSTRN-207ENST00000559591 MSH5O43196 834 aa21.79■■□□□ 1.08
KNSTRN-207ENST00000559591 DCAF8L2P0C7V8 631 aa21.7■■□□□ 1.06
KNSTRN-207ENST00000559591 CUX2O14529 1486 aa21.7■■□□□ 1.06
KNSTRN-207ENST00000559591 EIF4G1Q04637 1599 aaKnown RBP21.6■■□□□ 1.05
KNSTRN-207ENST00000559591 SHROOM4Q9ULL8 1493 aa21.52■■□□□ 1.04
KNSTRN-207ENST00000559591 PIAS4Q8N2W9 510 aaPredicted RBP21.42■■□□□ 1.02
KNSTRN-207ENST00000559591 ERCC6Q03468 1493 aa21.26■□□□□ 0.99
KNSTRN-207ENST00000559591 MYO15BQ96JP2 1530 aa21.23■□□□□ 0.99
KNSTRN-207ENST00000559591 PLPPR3Q6T4P5 718 aa21.22■□□□□ 0.99
KNSTRN-207ENST00000559591 PPP6R1Q9UPN7 881 aa21.06■□□□□ 0.96
KNSTRN-207ENST00000559591 ADRA2BP18089 450 aa21.01■□□□□ 0.95
KNSTRN-207ENST00000559591 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
KNSTRN-207ENST00000559591 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
KNSTRN-207ENST00000559591 NESP48681 1621 aa20.6■□□□□ 0.89
KNSTRN-207ENST00000559591 SMARCA2P51531 1590 aa20.46■□□□□ 0.87
KNSTRN-207ENST00000559591 OSCARQ8IYS5 282 aa20.45■□□□□ 0.86
KNSTRN-207ENST00000559591 BAZ1AQ9NRL2 1556 aaPredicted RBP20.45■□□□□ 0.86
KNSTRN-207ENST00000559591 DCAF1Q9Y4B6 1507 aa20.41■□□□□ 0.86
KNSTRN-207ENST00000559591 TRHP20396 242 aaPredicted RBP20.39■□□□□ 0.85
KNSTRN-207ENST00000559591 NCAPD3P42695 1498 aa20.38■□□□□ 0.85
KNSTRN-207ENST00000559591 RIMBP3CA6NJZ7 1639 aa20.38■□□□□ 0.85
KNSTRN-207ENST00000559591 RIMBP3BA6NNM3 1639 aa20.38■□□□□ 0.85
KNSTRN-207ENST00000559591 RIMBP3Q9UFD9 1639 aa20.38■□□□□ 0.85
KNSTRN-207ENST00000559591 ILDR1Q86SU0 546 aaPredicted RBP20.32■□□□□ 0.84
KNSTRN-207ENST00000559591 ZCCHC6Q5VYS8 1495 aaKnown RBP20.3■□□□□ 0.84
KNSTRN-207ENST00000559591 KIF21AQ7Z4S6 1674 aa20.27■□□□□ 0.84
KNSTRN-207ENST00000559591 LAMC3Q9Y6N6 1575 aa20.18■□□□□ 0.82
KNSTRN-207ENST00000559591 ARHGEF11O15085 1522 aa20.15■□□□□ 0.82
KNSTRN-207ENST00000559591 ATAD2BQ9ULI0 1458 aa20.12■□□□□ 0.81
KNSTRN-207ENST00000559591 PDS5BQ9NTI5 1447 aa20.12■□□□□ 0.81
KNSTRN-207ENST00000559591 HMGXB3Q12766 1538 aa20.11■□□□□ 0.81
KNSTRN-207ENST00000559591 CYB5RLQ6IPT4 315 aa20.1■□□□□ 0.81
KNSTRN-207ENST00000559591 MRC2Q9UBG0 1479 aa20.05■□□□□ 0.8
KNSTRN-207ENST00000559591 WDR62O43379 1518 aa20.05■□□□□ 0.8
KNSTRN-207ENST00000559591 BAZ1BQ9UIG0 1483 aaKnown RBP19.87■□□□□ 0.77
KNSTRN-207ENST00000559591 ARAP1Q96P48 1450 aa19.86■□□□□ 0.77
KNSTRN-207ENST00000559591 SMARCA4P51532 1647 aa19.73■□□□□ 0.75
KNSTRN-207ENST00000559591 CADPSQ9ULU8 1353 aa19.7■□□□□ 0.74
KNSTRN-207ENST00000559591 CEP164Q9UPV0 1460 aa19.68■□□□□ 0.74
KNSTRN-207ENST00000559591 RSF1Q96T23 1441 aaPredicted RBP19.53■□□□□ 0.72
KNSTRN-207ENST00000559591 PEG3Q9GZU2 1588 aa19.52■□□□□ 0.71
KNSTRN-207ENST00000559591 FANCD2Q9BXW9 1451 aa19.51■□□□□ 0.71
KNSTRN-207ENST00000559591 ZNF608Q9ULD9 1512 aaPredicted RBP19.46■□□□□ 0.71
KNSTRN-207ENST00000559591 MAPK8IP2Q13387 824 aaPredicted RBP19.45■□□□□ 0.7
KNSTRN-207ENST00000559591 URB2Q14146 1524 aaKnown RBP19.45■□□□□ 0.7
KNSTRN-207ENST00000559591 DMRT2Q9Y5R5 561 aa19.43■□□□□ 0.7
KNSTRN-207ENST00000559591 CHD1O14646 1710 aa19.42■□□□□ 0.7
KNSTRN-207ENST00000559591 KDM4FA0A1W2PPD8 638 aa19.35■□□□□ 0.69
KNSTRN-207ENST00000559591 IFT140Q96RY7 1462 aa19.33■□□□□ 0.68
KNSTRN-207ENST00000559591 SCAF1Q9H7N4 1312 aaKnown RBP19.32■□□□□ 0.68
KNSTRN-207ENST00000559591 FBLN2P98095 1184 aa19.29■□□□□ 0.68
KNSTRN-207ENST00000559591 EIF4G3O43432 1585 aaKnown RBP19.28■□□□□ 0.68
KNSTRN-207ENST00000559591 LMTK3Q96Q04 1460 aa19.22■□□□□ 0.67
KNSTRN-207ENST00000559591 FBXO41Q8TF61 875 aa19.22■□□□□ 0.67
KNSTRN-207ENST00000559591 ERCC6L2Q5T890 1561 aa19.21■□□□□ 0.67
KNSTRN-207ENST00000559591 CFTRP13569 1480 aa19.16■□□□□ 0.66
KNSTRN-207ENST00000559591 MROH2BQ7Z745 1585 aa19.16■□□□□ 0.66
KNSTRN-207ENST00000559591 CLASP1Q7Z460 1538 aa19.15■□□□□ 0.66
KNSTRN-207ENST00000559591 SOCS7O14512 581 aa19.1■□□□□ 0.65
KNSTRN-207ENST00000559591 HECW2Q9P2P5 1572 aa19.09■□□□□ 0.65
KNSTRN-207ENST00000559591 AQRO60306 1485 aaKnown RBP eCLIP19.09■□□□□ 0.652e-11■■■□□ 14.8
KNSTRN-207ENST00000559591 GAPVD1Q14C86 1478 aa19.08■□□□□ 0.64
KNSTRN-207ENST00000559591 CACNB1Q02641 598 aaPredicted RBP19.05■□□□□ 0.64
KNSTRN-207ENST00000559591 KIF13AQ9H1H9 1805 aa19.02■□□□□ 0.64
KNSTRN-207ENST00000559591 SYNJ1O43426 1573 aa19.01■□□□□ 0.63
KNSTRN-207ENST00000559591 TOPBP1Q92547 1522 aa18.96■□□□□ 0.63
KNSTRN-207ENST00000559591 ILDR2Q71H61 639 aa18.96■□□□□ 0.63
KNSTRN-207ENST00000559591 KDM6BO15054 1643 aa18.89■□□□□ 0.62
KNSTRN-207ENST00000559591 TARBP1Q13395 1621 aaKnown RBP18.89■□□□□ 0.62
KNSTRN-207ENST00000559591 CHMP7Q8WUX9 453 aaPredicted RBP18.88■□□□□ 0.61
KNSTRN-207ENST00000559591 SNAPC4Q5SXM2 1469 aa18.87■□□□□ 0.61
KNSTRN-207ENST00000559591 WIZO95785 1651 aa18.86■□□□□ 0.61
KNSTRN-207ENST00000559591 SYNJ2O15056 1496 aa18.86■□□□□ 0.61
KNSTRN-207ENST00000559591 ADGRL1O94910 1474 aa18.86■□□□□ 0.61
KNSTRN-207ENST00000559591 PRDM2Q13029 1718 aa18.83■□□□□ 0.61
KNSTRN-207ENST00000559591 DISP3Q9P2K9 1392 aa18.81■□□□□ 0.6
KNSTRN-207ENST00000559591 DCAF8L1A6NGE4 600 aa18.79■□□□□ 0.6
KNSTRN-207ENST00000559591 FAM69CQ0P6D2 419 aa18.79■□□□□ 0.6
KNSTRN-207ENST00000559591 ABCC8Q09428 1581 aa18.79■□□□□ 0.6
KNSTRN-207ENST00000559591 DNMBPQ6XZF7 1577 aa18.76■□□□□ 0.59
KNSTRN-207ENST00000559591 TDRD9Q8NDG6 1382 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms