RNA–Protein interactions for RNA: ENST00000559364.1

ZNF609-204, Transcript of zinc finger protein 609, humanhuman

TSL 1 (best)

Gene ZNF609, Length 1,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF609-204ENST00000559364 NISCHQ9Y2I1 1504 aa27.91■■■□□ 2.06
ZNF609-204ENST00000559364 AEBP2Q6ZN18 517 aaPredicted RBP27.46■■□□□ 1.99
ZNF609-204ENST00000559364 CHIC1Q5VXU3 224 aa27.03■■□□□ 1.92
ZNF609-204ENST00000559364 CCDC180Q9P1Z9 1646 aa24.68■■□□□ 1.54
ZNF609-204ENST00000559364 ABCC9O60706 1549 aa23.79■■□□□ 1.4
ZNF609-204ENST00000559364 PHF23Q9BUL5 403 aaPredicted RBP23.75■■□□□ 1.39
ZNF609-204ENST00000559364 SENP3Q9H4L4 574 aaPredicted RBP23.33■■□□□ 1.33
ZNF609-204ENST00000559364 ZCCHC6Q5VYS8 1495 aaKnown RBP23.32■■□□□ 1.32
ZNF609-204ENST00000559364 DCAF8L2P0C7V8 631 aa23.13■■□□□ 1.29
ZNF609-204ENST00000559364 DCAF1Q9Y4B6 1507 aa23.1■■□□□ 1.29
ZNF609-204ENST00000559364 NACADO15069 1562 aa23.09■■□□□ 1.29
ZNF609-204ENST00000559364 MYO15BQ96JP2 1530 aa23.06■■□□□ 1.28
ZNF609-204ENST00000559364 RB1CC1Q8TDY2 1594 aa23.03■■□□□ 1.28
ZNF609-204ENST00000559364 UNC13AQ9UPW8 1703 aa22.65■■□□□ 1.22
ZNF609-204ENST00000559364 DNAJC5BQ9UF47 199 aa22.58■■□□□ 1.21
ZNF609-204ENST00000559364 SCRIBQ14160 1630 aa22.55■■□□□ 1.2
ZNF609-204ENST00000559364 BICRAQ9NZM4 1560 aa22.37■■□□□ 1.17
ZNF609-204ENST00000559364 PABPN1Q86U42 306 aaKnown RBP eCLIP22.28■■□□□ 1.16
ZNF609-204ENST00000559364 SHROOM4Q9ULL8 1493 aa22.24■■□□□ 1.15
ZNF609-204ENST00000559364 PLPPR3Q6T4P5 718 aa22.06■■□□□ 1.12
ZNF609-204ENST00000559364 EIF4G1Q04637 1599 aaKnown RBP21.73■■□□□ 1.07
ZNF609-204ENST00000559364 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
ZNF609-204ENST00000559364 SMARCA4P51532 1647 aa21.6■■□□□ 1.05
ZNF609-204ENST00000559364 FOXD1Q16676 465 aa21.59■■□□□ 1.05
ZNF609-204ENST00000559364 BAZ1AQ9NRL2 1556 aaPredicted RBP21.59■■□□□ 1.05
ZNF609-204ENST00000559364 CC2D2AQ9P2K1 1620 aa21.57■■□□□ 1.04
ZNF609-204ENST00000559364 MROH2BQ7Z745 1585 aa21.53■■□□□ 1.04
ZNF609-204ENST00000559364 RSF1Q96T23 1441 aaPredicted RBP21.39■■□□□ 1.01
ZNF609-204ENST00000559364 PEG3Q9GZU2 1588 aa21.38■■□□□ 1.01
ZNF609-204ENST00000559364 ATAD2BQ9ULI0 1458 aa21.37■■□□□ 1.01
ZNF609-204ENST00000559364 SMARCA2P51531 1590 aa21.35■■□□□ 1.01
ZNF609-204ENST00000559364 WIZO95785 1651 aa21.34■■□□□ 1.01
ZNF609-204ENST00000559364 NCAPD3P42695 1498 aa21.29■■□□□ 1
ZNF609-204ENST00000559364 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
ZNF609-204ENST00000559364 BAZ1BQ9UIG0 1483 aaKnown RBP21.2■□□□□ 0.98
ZNF609-204ENST00000559364 TOP2AP11388 1531 aaKnown RBP21.09■□□□□ 0.97
ZNF609-204ENST00000559364 SUPT5HO00267 1087 aaKnown RBP21.08■□□□□ 0.97
ZNF609-204ENST00000559364 DNAJC5Q9H3Z4 198 aa21.06■□□□□ 0.96
ZNF609-204ENST00000559364 ADRA2BP18089 450 aa20.9■□□□□ 0.94
ZNF609-204ENST00000559364 PPP6R1Q9UPN7 881 aa20.89■□□□□ 0.93
ZNF609-204ENST00000559364 CCDC88BA6NC98 1476 aa20.84■□□□□ 0.93
ZNF609-204ENST00000559364 CUX2O14529 1486 aa20.74■□□□□ 0.91
ZNF609-204ENST00000559364 NESP48681 1621 aa20.72■□□□□ 0.91
ZNF609-204ENST00000559364 LAMC3Q9Y6N6 1575 aa20.7■□□□□ 0.9
ZNF609-204ENST00000559364 CADPSQ9ULU8 1353 aa20.68■□□□□ 0.9
ZNF609-204ENST00000559364 CFTRP13569 1480 aa20.65■□□□□ 0.9
ZNF609-204ENST00000559364 PRDM2Q13029 1718 aa20.62■□□□□ 0.89
ZNF609-204ENST00000559364 KIF21AQ7Z4S6 1674 aa20.53■□□□□ 0.88
ZNF609-204ENST00000559364 ERCC6Q03468 1493 aa20.53■□□□□ 0.88
ZNF609-204ENST00000559364 PDS5BQ9NTI5 1447 aa20.51■□□□□ 0.87
ZNF609-204ENST00000559364 FANCD2Q9BXW9 1451 aa20.46■□□□□ 0.87
ZNF609-204ENST00000559364 PIAS4Q8N2W9 510 aaPredicted RBP20.45■□□□□ 0.86
ZNF609-204ENST00000559364 CEP164Q9UPV0 1460 aa20.4■□□□□ 0.86
ZNF609-204ENST00000559364 THOC2Q8NI27 1593 aaKnown RBP20.34■□□□□ 0.85
ZNF609-204ENST00000559364 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
ZNF609-204ENST00000559364 URB2Q14146 1524 aaKnown RBP20.26■□□□□ 0.83
ZNF609-204ENST00000559364 WDR62O43379 1518 aa20.23■□□□□ 0.83
ZNF609-204ENST00000559364 ABCC8Q09428 1581 aa20.21■□□□□ 0.83
ZNF609-204ENST00000559364 DNMBPQ6XZF7 1577 aa20.19■□□□□ 0.82
ZNF609-204ENST00000559364 TOPBP1Q92547 1522 aa20.19■□□□□ 0.82
ZNF609-204ENST00000559364 CUX1P39880 1505 aa20.18■□□□□ 0.82
ZNF609-204ENST00000559364 WRNQ14191 1432 aaPredicted RBP eCLIP20.14■□□□□ 0.81
ZNF609-204ENST00000559364 SYNJ1O43426 1573 aa20.12■□□□□ 0.81
ZNF609-204ENST00000559364 BIVM-ERCC5R4GMW8 1640 aa20.11■□□□□ 0.81
ZNF609-204ENST00000559364 TOP2BQ02880 1626 aa20.09■□□□□ 0.81
ZNF609-204ENST00000559364 POLA1P09884 1462 aaPredicted RBP20.04■□□□□ 0.8
ZNF609-204ENST00000559364 FGD5Q6ZNL6 1462 aa20.04■□□□□ 0.8
ZNF609-204ENST00000559364 TARBP1Q13395 1621 aaKnown RBP19.96■□□□□ 0.79
ZNF609-204ENST00000559364 RAD54L2Q9Y4B4 1467 aa19.95■□□□□ 0.78
ZNF609-204ENST00000559364 IFT140Q96RY7 1462 aa19.95■□□□□ 0.78
ZNF609-204ENST00000559364 SOGA1O94964 1423 aa19.94■□□□□ 0.78
ZNF609-204ENST00000559364 WDR97A6NE52 1622 aa19.91■□□□□ 0.78
ZNF609-204ENST00000559364 MSH5O43196 834 aa19.89■□□□□ 0.77
ZNF609-204ENST00000559364 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
ZNF609-204ENST00000559364 ZNF608Q9ULD9 1512 aaPredicted RBP19.86■□□□□ 0.77
ZNF609-204ENST00000559364 ABCA10Q8WWZ4 1543 aa19.86■□□□□ 0.77
ZNF609-204ENST00000559364 EIF4G3O43432 1585 aaKnown RBP19.81■□□□□ 0.76
ZNF609-204ENST00000559364 TDRD9Q8NDG6 1382 aaKnown RBP19.78■□□□□ 0.76
ZNF609-204ENST00000559364 AQRO60306 1485 aaKnown RBP eCLIP19.78■□□□□ 0.768e-7■■■■■ 28.7
ZNF609-204ENST00000559364 ABCA5Q8WWZ7 1642 aa19.77■□□□□ 0.76
ZNF609-204ENST00000559364 PBRM1Q86U86 1689 aa19.73■□□□□ 0.75
ZNF609-204ENST00000559364 GAPVD1Q14C86 1478 aa19.72■□□□□ 0.75
ZNF609-204ENST00000559364 KIF27Q86VH2 1401 aa19.67■□□□□ 0.74
ZNF609-204ENST00000559364 OSCARQ8IYS5 282 aa19.67■□□□□ 0.74
ZNF609-204ENST00000559364 GRIN2BQ13224 1484 aa19.66■□□□□ 0.74
ZNF609-204ENST00000559364 RUSC2Q8N2Y8 1516 aa19.66■□□□□ 0.74
ZNF609-204ENST00000559364 ERICH3Q5RHP9 1530 aa19.62■□□□□ 0.73
ZNF609-204ENST00000559364 SNAPC4Q5SXM2 1469 aa19.61■□□□□ 0.73
ZNF609-204ENST00000559364 MAGI1Q96QZ7 1491 aaPredicted RBP19.58■□□□□ 0.73
ZNF609-204ENST00000559364 IGF1RP08069 1367 aa19.58■□□□□ 0.72
ZNF609-204ENST00000559364 ADAMTS12P58397 1594 aa19.55■□□□□ 0.72
ZNF609-204ENST00000559364 CHD1O14646 1710 aa19.54■□□□□ 0.72
ZNF609-204ENST00000559364 CUL7Q14999 1698 aa19.54■□□□□ 0.72
ZNF609-204ENST00000559364 EEA1Q15075 1411 aa19.52■□□□□ 0.72
ZNF609-204ENST00000559364 SYNJ2O15056 1496 aa19.5■□□□□ 0.71
ZNF609-204ENST00000559364 FHAD1B1AJZ9 1412 aa19.49■□□□□ 0.71
ZNF609-204ENST00000559364 FAM9AQ8IZU1 332 aaPredicted RBP19.48■□□□□ 0.71
ZNF609-204ENST00000559364 CARMIL1Q5VZK9 1371 aa19.46■□□□□ 0.71
ZNF609-204ENST00000559364 CSRNP3Q8WYN3 585 aa19.46■□□□□ 0.71
ZNF609-204ENST00000559364 FBLN2P98095 1184 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms