RNA–Protein interactions for RNA: ENST00000558903.1

CHRNA3-203, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-203ENST00000558903 CHIC1Q5VXU3 224 aa15.07■□□□□ 0
CHRNA3-203ENST00000558903 AEBP2Q6ZN18 517 aaPredicted RBP15.04■□□□□ -0
CHRNA3-203ENST00000558903 NISCHQ9Y2I1 1504 aa13.95□□□□□ -0.18
CHRNA3-203ENST00000558903 PHF23Q9BUL5 403 aaPredicted RBP13.18□□□□□ -0.3
CHRNA3-203ENST00000558903 SENP3Q9H4L4 574 aaPredicted RBP12.89□□□□□ -0.35
CHRNA3-203ENST00000558903 CCDC180Q9P1Z9 1646 aa12.51□□□□□ -0.41
CHRNA3-203ENST00000558903 PLPPR3Q6T4P5 718 aa12.41□□□□□ -0.42
CHRNA3-203ENST00000558903 ABCC9O60706 1549 aa12.09□□□□□ -0.47
CHRNA3-203ENST00000558903 FOXD1Q16676 465 aa11.81□□□□□ -0.52
CHRNA3-203ENST00000558903 RB1CC1Q8TDY2 1594 aa11.72□□□□□ -0.53
CHRNA3-203ENST00000558903 NACADO15069 1562 aa11.67□□□□□ -0.54
CHRNA3-203ENST00000558903 DCAF8L2P0C7V8 631 aa11.67□□□□□ -0.54
CHRNA3-203ENST00000558903 ZCCHC6Q5VYS8 1495 aaKnown RBP11.63□□□□□ -0.55
CHRNA3-203ENST00000558903 MYO15BQ96JP2 1530 aa11.55□□□□□ -0.56
CHRNA3-203ENST00000558903 ADRA2BP18089 450 aa11.54□□□□□ -0.56
CHRNA3-203ENST00000558903 DCAF1Q9Y4B6 1507 aa11.53□□□□□ -0.56
CHRNA3-203ENST00000558903 UNC13AQ9UPW8 1703 aa11.52□□□□□ -0.57
CHRNA3-203ENST00000558903 PPP6R1Q9UPN7 881 aa11.51□□□□□ -0.57
CHRNA3-203ENST00000558903 SCRIBQ14160 1630 aa11.41□□□□□ -0.58
CHRNA3-203ENST00000558903 BICRAQ9NZM4 1560 aa11.26□□□□□ -0.61
CHRNA3-203ENST00000558903 PIAS4Q8N2W9 510 aaPredicted RBP11.25□□□□□ -0.61
CHRNA3-203ENST00000558903 PABPN1Q86U42 306 aaKnown RBP eCLIP11.24□□□□□ -0.61
CHRNA3-203ENST00000558903 SHROOM4Q9ULL8 1493 aa11.2□□□□□ -0.62
CHRNA3-203ENST00000558903 EIF4G1Q04637 1599 aaKnown RBP11.01□□□□□ -0.65
CHRNA3-203ENST00000558903 CC2D2AQ9P2K1 1620 aa10.98□□□□□ -0.65
CHRNA3-203ENST00000558903 MSH5O43196 834 aa10.94□□□□□ -0.66
CHRNA3-203ENST00000558903 PPP4R3CPQ6ZMV5 832 aa10.9□□□□□ -0.66
CHRNA3-203ENST00000558903 SMARCA4P51532 1647 aa10.88□□□□□ -0.67
CHRNA3-203ENST00000558903 KCNA4P22459 653 aa10.88□□□□□ -0.67
CHRNA3-203ENST00000558903 BAZ1AQ9NRL2 1556 aaPredicted RBP10.86□□□□□ -0.67
CHRNA3-203ENST00000558903 DNAJC5BQ9UF47 199 aa10.86□□□□□ -0.67
CHRNA3-203ENST00000558903 CECR2Q9BXF3 1484 aa10.86□□□□□ -0.67
CHRNA3-203ENST00000558903 NCBP3Q53F19 620 aaKnown RBP10.81□□□□□ -0.68
CHRNA3-203ENST00000558903 SMARCA2P51531 1590 aa10.8□□□□□ -0.68
CHRNA3-203ENST00000558903 SCAF1Q9H7N4 1312 aaKnown RBP10.76□□□□□ -0.69
CHRNA3-203ENST00000558903 MROH2BQ7Z745 1585 aa10.73□□□□□ -0.69
CHRNA3-203ENST00000558903 HMGXB3Q12766 1538 aa10.72□□□□□ -0.69
CHRNA3-203ENST00000558903 WIZO95785 1651 aa10.71□□□□□ -0.69
CHRNA3-203ENST00000558903 PEG3Q9GZU2 1588 aa10.71□□□□□ -0.69
CHRNA3-203ENST00000558903 BAZ1BQ9UIG0 1483 aaKnown RBP10.71□□□□□ -0.69
CHRNA3-203ENST00000558903 ATAD2BQ9ULI0 1458 aa10.71□□□□□ -0.69
CHRNA3-203ENST00000558903 NCAPD3P42695 1498 aa10.68□□□□□ -0.7
CHRNA3-203ENST00000558903 CNKSR2Q8WXI2 1034 aa10.6□□□□□ -0.71
CHRNA3-203ENST00000558903 RSF1Q96T23 1441 aaPredicted RBP10.58□□□□□ -0.72
CHRNA3-203ENST00000558903 TOP2AP11388 1531 aaKnown RBP10.58□□□□□ -0.72
CHRNA3-203ENST00000558903 NPM3O75607 178 aaKnown RBP10.52□□□□□ -0.73
CHRNA3-203ENST00000558903 PRDM2Q13029 1718 aa10.51□□□□□ -0.73
CHRNA3-203ENST00000558903 LAMC3Q9Y6N6 1575 aa10.51□□□□□ -0.73
CHRNA3-203ENST00000558903 ERCC6Q03468 1493 aa10.49□□□□□ -0.73
CHRNA3-203ENST00000558903 SLC4A1APQ9BWU0 796 aaKnown RBP10.49□□□□□ -0.73
CHRNA3-203ENST00000558903 KIF21AQ7Z4S6 1674 aa10.47□□□□□ -0.73
CHRNA3-203ENST00000558903 NESP48681 1621 aa10.45□□□□□ -0.74
CHRNA3-203ENST00000558903 SUPT5HO00267 1087 aaKnown RBP10.44□□□□□ -0.74
CHRNA3-203ENST00000558903 EHMT2Q96KQ7 1210 aa10.4□□□□□ -0.74
CHRNA3-203ENST00000558903 PDS5BQ9NTI5 1447 aa10.39□□□□□ -0.75
CHRNA3-203ENST00000558903 CCDC88BA6NC98 1476 aa10.38□□□□□ -0.75
CHRNA3-203ENST00000558903 CADPSQ9ULU8 1353 aa10.38□□□□□ -0.75
CHRNA3-203ENST00000558903 THOC2Q8NI27 1593 aaKnown RBP10.35□□□□□ -0.75
CHRNA3-203ENST00000558903 MAPK8IP2Q13387 824 aaPredicted RBP10.35□□□□□ -0.75
CHRNA3-203ENST00000558903 CEP164Q9UPV0 1460 aa10.35□□□□□ -0.75
CHRNA3-203ENST00000558903 RNF216Q9NWF9 866 aaPredicted RBP10.33□□□□□ -0.76
CHRNA3-203ENST00000558903 CFTRP13569 1480 aa10.33□□□□□ -0.76
CHRNA3-203ENST00000558903 FANCD2Q9BXW9 1451 aa10.32□□□□□ -0.76
CHRNA3-203ENST00000558903 DMRT2Q9Y5R5 561 aa10.3□□□□□ -0.76
CHRNA3-203ENST00000558903 CUX2O14529 1486 aa10.3□□□□□ -0.76
CHRNA3-203ENST00000558903 MRC2Q9UBG0 1479 aa10.3□□□□□ -0.76
CHRNA3-203ENST00000558903 WDR62O43379 1518 aa10.25□□□□□ -0.77
CHRNA3-203ENST00000558903 HOXD11P31277 338 aaPredicted RBP10.2□□□□□ -0.78
CHRNA3-203ENST00000558903 DNMBPQ6XZF7 1577 aa10.2□□□□□ -0.78
CHRNA3-203ENST00000558903 ABCC8Q09428 1581 aa10.19□□□□□ -0.78
CHRNA3-203ENST00000558903 URB2Q14146 1524 aaKnown RBP10.18□□□□□ -0.78
CHRNA3-203ENST00000558903 CSRNP3Q8WYN3 585 aa10.18□□□□□ -0.78
CHRNA3-203ENST00000558903 TOPBP1Q92547 1522 aa10.16□□□□□ -0.78
CHRNA3-203ENST00000558903 BIVM-ERCC5R4GMW8 1640 aa10.1□□□□□ -0.79
CHRNA3-203ENST00000558903 CUX1P39880 1505 aa10.09□□□□□ -0.79
CHRNA3-203ENST00000558903 IFT140Q96RY7 1462 aa10.09□□□□□ -0.79
CHRNA3-203ENST00000558903 EIF4G3O43432 1585 aaKnown RBP10.08□□□□□ -0.8
CHRNA3-203ENST00000558903 FGD5Q6ZNL6 1462 aa10.07□□□□□ -0.8
CHRNA3-203ENST00000558903 WDR97A6NE52 1622 aa10.07□□□□□ -0.8
CHRNA3-203ENST00000558903 TOP2BQ02880 1626 aa10.07□□□□□ -0.8
CHRNA3-203ENST00000558903 POLA1P09884 1462 aaPredicted RBP10.06□□□□□ -0.8
CHRNA3-203ENST00000558903 WRNQ14191 1432 aaPredicted RBP eCLIP10.06□□□□□ -0.8
CHRNA3-203ENST00000558903 SYNJ1O43426 1573 aa10.05□□□□□ -0.8
CHRNA3-203ENST00000558903 TARBP1Q13395 1621 aaKnown RBP10.05□□□□□ -0.8
CHRNA3-203ENST00000558903 FOXD4L1Q9NU39 408 aa10.05□□□□□ -0.8
CHRNA3-203ENST00000558903 PBRM1Q86U86 1689 aa10.05□□□□□ -0.8
CHRNA3-203ENST00000558903 SOGA1O94964 1423 aa10.01□□□□□ -0.81
CHRNA3-203ENST00000558903 RAD54L2Q9Y4B4 1467 aa10□□□□□ -0.81
CHRNA3-203ENST00000558903 CHD1O14646 1710 aa9.99□□□□□ -0.81
CHRNA3-203ENST00000558903 ZNF608Q9ULD9 1512 aaPredicted RBP9.99□□□□□ -0.81
CHRNA3-203ENST00000558903 ZBTB22O15209 634 aa9.98□□□□□ -0.81
CHRNA3-203ENST00000558903 ABCA5Q8WWZ7 1642 aa9.97□□□□□ -0.81
CHRNA3-203ENST00000558903 ABCA10Q8WWZ4 1543 aa9.95□□□□□ -0.82
CHRNA3-203ENST00000558903 AQRO60306 1485 aaKnown RBP eCLIP9.94□□□□□ -0.82
CHRNA3-203ENST00000558903 TDRD9Q8NDG6 1382 aaKnown RBP9.93□□□□□ -0.82
CHRNA3-203ENST00000558903 GRIN2BQ13224 1484 aa9.92□□□□□ -0.82
CHRNA3-203ENST00000558903 GAPVD1Q14C86 1478 aa9.92□□□□□ -0.82
CHRNA3-203ENST00000558903 SNAPC4Q5SXM2 1469 aa9.91□□□□□ -0.82
CHRNA3-203ENST00000558903 MAGI1Q96QZ7 1491 aaPredicted RBP9.91□□□□□ -0.82
CHRNA3-203ENST00000558903 FBLN2P98095 1184 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms