RNA–Protein interactions for RNA: ENST00000558842.1

ZFHX3-204, Transcript of zinc finger homeobox 3, humanhuman

TSL 5

Gene ZFHX3, Length 240 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX3-204ENST00000558842 DNAJC5BQ9UF47 199 aa15.61■□□□□ 0.09
ZFHX3-204ENST00000558842 ABCC9O60706 1549 aa15.53■□□□□ 0.08
ZFHX3-204ENST00000558842 DNAJC5Q9H3Z4 198 aa15.35■□□□□ 0.05
ZFHX3-204ENST00000558842 NISCHQ9Y2I1 1504 aa15.08■□□□□ 0.01
ZFHX3-204ENST00000558842 TRIM41Q8WV44 630 aa14.37□□□□□ -0.11
ZFHX3-204ENST00000558842 PABPN1Q86U42 306 aaKnown RBP eCLIP14.28□□□□□ -0.12
ZFHX3-204ENST00000558842 RB1CC1Q8TDY2 1594 aa14.15□□□□□ -0.14
ZFHX3-204ENST00000558842 CECR2Q9BXF3 1484 aa14.11□□□□□ -0.15
ZFHX3-204ENST00000558842 CCDC180Q9P1Z9 1646 aa14.1□□□□□ -0.15
ZFHX3-204ENST00000558842 AEBP2Q6ZN18 517 aaPredicted RBP13.99□□□□□ -0.17
ZFHX3-204ENST00000558842 CC2D2AQ9P2K1 1620 aa13.89□□□□□ -0.19
ZFHX3-204ENST00000558842 CUX2O14529 1486 aa13.86□□□□□ -0.19
ZFHX3-204ENST00000558842 UNC13AQ9UPW8 1703 aa13.71□□□□□ -0.21
ZFHX3-204ENST00000558842 NACADO15069 1562 aa13.66□□□□□ -0.22
ZFHX3-204ENST00000558842 DCAF8L2P0C7V8 631 aa13.65□□□□□ -0.22
ZFHX3-204ENST00000558842 BICRAQ9NZM4 1560 aa13.64□□□□□ -0.23
ZFHX3-204ENST00000558842 ERCC6Q03468 1493 aa13.61□□□□□ -0.23
ZFHX3-204ENST00000558842 EIF4G1Q04637 1599 aaKnown RBP13.51□□□□□ -0.25
ZFHX3-204ENST00000558842 ILDR1Q86SU0 546 aaPredicted RBP13.51□□□□□ -0.25
ZFHX3-204ENST00000558842 SHROOM4Q9ULL8 1493 aa13.36□□□□□ -0.27
ZFHX3-204ENST00000558842 TRHP20396 242 aaPredicted RBP13.35□□□□□ -0.27
ZFHX3-204ENST00000558842 OSCARQ8IYS5 282 aa13.1□□□□□ -0.31
ZFHX3-204ENST00000558842 RIMBP3CA6NJZ7 1639 aa13□□□□□ -0.33
ZFHX3-204ENST00000558842 RIMBP3BA6NNM3 1639 aa13□□□□□ -0.33
ZFHX3-204ENST00000558842 RIMBP3Q9UFD9 1639 aa13□□□□□ -0.33
ZFHX3-204ENST00000558842 BAZ1AQ9NRL2 1556 aaPredicted RBP13□□□□□ -0.33
ZFHX3-204ENST00000558842 THOC2Q8NI27 1593 aaKnown RBP12.98□□□□□ -0.33
ZFHX3-204ENST00000558842 SCRIBQ14160 1630 aa12.96□□□□□ -0.33
ZFHX3-204ENST00000558842 CYB5RLQ6IPT4 315 aa12.93□□□□□ -0.34
ZFHX3-204ENST00000558842 SMARCA2P51531 1590 aa12.93□□□□□ -0.34
ZFHX3-204ENST00000558842 MYO15BQ96JP2 1530 aa12.92□□□□□ -0.34
ZFHX3-204ENST00000558842 NESP48681 1621 aa12.91□□□□□ -0.34
ZFHX3-204ENST00000558842 ARHGEF11O15085 1522 aa12.83□□□□□ -0.36
ZFHX3-204ENST00000558842 LMTK3Q96Q04 1460 aa12.78□□□□□ -0.36
ZFHX3-204ENST00000558842 SOCS7O14512 581 aa12.7□□□□□ -0.38
ZFHX3-204ENST00000558842 KIF21AQ7Z4S6 1674 aa12.69□□□□□ -0.38
ZFHX3-204ENST00000558842 PDS5BQ9NTI5 1447 aa12.62□□□□□ -0.39
ZFHX3-204ENST00000558842 FBXO41Q8TF61 875 aa12.62□□□□□ -0.39
ZFHX3-204ENST00000558842 NCAPD3P42695 1498 aa12.59□□□□□ -0.39
ZFHX3-204ENST00000558842 ARAP1Q96P48 1450 aa12.59□□□□□ -0.39
ZFHX3-204ENST00000558842 LAMC3Q9Y6N6 1575 aa12.58□□□□□ -0.4
ZFHX3-204ENST00000558842 MRC2Q9UBG0 1479 aa12.57□□□□□ -0.4
ZFHX3-204ENST00000558842 WDR62O43379 1518 aa12.52□□□□□ -0.41
ZFHX3-204ENST00000558842 ILDR2Q71H61 639 aa12.5□□□□□ -0.41
ZFHX3-204ENST00000558842 ERCC6L2Q5T890 1561 aa12.49□□□□□ -0.41
ZFHX3-204ENST00000558842 DISP3Q9P2K9 1392 aa12.48□□□□□ -0.41
ZFHX3-204ENST00000558842 KDM4FA0A1W2PPD8 638 aa12.44□□□□□ -0.42
ZFHX3-204ENST00000558842 HMGXB3Q12766 1538 aa12.4□□□□□ -0.42
ZFHX3-204ENST00000558842 ATAD2BQ9ULI0 1458 aa12.4□□□□□ -0.43
ZFHX3-204ENST00000558842 HECW2Q9P2P5 1572 aa12.35□□□□□ -0.43
ZFHX3-204ENST00000558842 RSF1Q96T23 1441 aaPredicted RBP12.32□□□□□ -0.44
ZFHX3-204ENST00000558842 BAZ1BQ9UIG0 1483 aaKnown RBP12.32□□□□□ -0.44
ZFHX3-204ENST00000558842 FBLN2P98095 1184 aa12.3□□□□□ -0.44
ZFHX3-204ENST00000558842 CEP164Q9UPV0 1460 aa12.28□□□□□ -0.44
ZFHX3-204ENST00000558842 DCAF1Q9Y4B6 1507 aa12.28□□□□□ -0.44
ZFHX3-204ENST00000558842 SYNJ2O15056 1496 aa12.21□□□□□ -0.45
ZFHX3-204ENST00000558842 CADPSQ9ULU8 1353 aa12.21□□□□□ -0.45
ZFHX3-204ENST00000558842 CHD1O14646 1710 aa12.2□□□□□ -0.46
ZFHX3-204ENST00000558842 ZCCHC6Q5VYS8 1495 aaKnown RBP12.19□□□□□ -0.46
ZFHX3-204ENST00000558842 ZNF608Q9ULD9 1512 aaPredicted RBP12.14□□□□□ -0.47
ZFHX3-204ENST00000558842 FANCD2Q9BXW9 1451 aa12.12□□□□□ -0.47
ZFHX3-204ENST00000558842 SPATA31D1Q6ZQQ2 1576 aa12.12□□□□□ -0.47
ZFHX3-204ENST00000558842 SMARCA4P51532 1647 aa12.11□□□□□ -0.47
ZFHX3-204ENST00000558842 ADGRL1O94910 1474 aa12.1□□□□□ -0.47
ZFHX3-204ENST00000558842 KDM6BO15054 1643 aa12.07□□□□□ -0.48
ZFHX3-204ENST00000558842 IFT140Q96RY7 1462 aa12.05□□□□□ -0.48
ZFHX3-204ENST00000558842 URB2Q14146 1524 aaKnown RBP12.05□□□□□ -0.48
ZFHX3-204ENST00000558842 GAPVD1Q14C86 1478 aa12.03□□□□□ -0.48
ZFHX3-204ENST00000558842 EIF4G3O43432 1585 aaKnown RBP12.03□□□□□ -0.48
ZFHX3-204ENST00000558842 KIF13AQ9H1H9 1805 aa12.01□□□□□ -0.49
ZFHX3-204ENST00000558842 FAM69CQ0P6D2 419 aa11.98□□□□□ -0.49
ZFHX3-204ENST00000558842 CLASP1Q7Z460 1538 aa11.94□□□□□ -0.5
ZFHX3-204ENST00000558842 SYNJ1O43426 1573 aa11.93□□□□□ -0.5
ZFHX3-204ENST00000558842 AQRO60306 1485 aaKnown RBP eCLIP11.9□□□□□ -0.5
ZFHX3-204ENST00000558842 CHMP7Q8WUX9 453 aaPredicted RBP11.9□□□□□ -0.5
ZFHX3-204ENST00000558842 CERKQ8TCT0 537 aa11.86□□□□□ -0.51
ZFHX3-204ENST00000558842 PEG3Q9GZU2 1588 aa11.85□□□□□ -0.51
ZFHX3-204ENST00000558842 TSPOAP1O95153 1857 aa11.81□□□□□ -0.52
ZFHX3-204ENST00000558842 ABCC10Q5T3U5 1492 aa11.79□□□□□ -0.52
ZFHX3-204ENST00000558842 NPM1P06748 294 aaKnown RBP eCLIP11.79□□□□□ -0.52
ZFHX3-204ENST00000558842 SNAPC4Q5SXM2 1469 aa11.76□□□□□ -0.53
ZFHX3-204ENST00000558842 CFTRP13569 1480 aa11.75□□□□□ -0.53
ZFHX3-204ENST00000558842 TOP2BQ02880 1626 aa11.75□□□□□ -0.53
ZFHX3-204ENST00000558842 DIP2BQ9P265 1576 aa11.72□□□□□ -0.53
ZFHX3-204ENST00000558842 MROH2BQ7Z745 1585 aa11.71□□□□□ -0.54
ZFHX3-204ENST00000558842 TOPBP1Q92547 1522 aa11.7□□□□□ -0.54
ZFHX3-204ENST00000558842 TDRD9Q8NDG6 1382 aaKnown RBP11.65□□□□□ -0.55
ZFHX3-204ENST00000558842 TARBP1Q13395 1621 aaKnown RBP11.64□□□□□ -0.55
ZFHX3-204ENST00000558842 MAGI1Q96QZ7 1491 aaPredicted RBP11.62□□□□□ -0.55
ZFHX3-204ENST00000558842 ABCC8Q09428 1581 aa11.61□□□□□ -0.55
ZFHX3-204ENST00000558842 MAPKBP1O60336 1514 aa11.6□□□□□ -0.55
ZFHX3-204ENST00000558842 PCF11O94913 1555 aaKnown RBP11.58□□□□□ -0.55
ZFHX3-204ENST00000558842 CEP170Q5SW79 1584 aa11.56□□□□□ -0.56
ZFHX3-204ENST00000558842 DNMBPQ6XZF7 1577 aa11.55□□□□□ -0.56
ZFHX3-204ENST00000558842 PHF23Q9BUL5 403 aaPredicted RBP11.55□□□□□ -0.56
ZFHX3-204ENST00000558842 HSPA2P54652 639 aa11.54□□□□□ -0.56
ZFHX3-204ENST00000558842 PRDM2Q13029 1718 aa11.53□□□□□ -0.56
ZFHX3-204ENST00000558842 GRIN2BQ13224 1484 aa11.51□□□□□ -0.57
ZFHX3-204ENST00000558842 RAD54L2Q9Y4B4 1467 aa11.51□□□□□ -0.57
ZFHX3-204ENST00000558842 POLA1P09884 1462 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms