RNA–Protein interactions for RNA: ENST00000558729.5

PKNOX2-210, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 604 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-210ENST00000558729 NISCHQ9Y2I1 1504 aa39.46■■■■□ 3.91
PKNOX2-210ENST00000558729 CCDC180Q9P1Z9 1646 aa34.97■■■■□ 3.19
PKNOX2-210ENST00000558729 ABCC9O60706 1549 aa33.89■■■■□ 3.02
PKNOX2-210ENST00000558729 ZCCHC6Q5VYS8 1495 aaKnown RBP32.93■■■□□ 2.86
PKNOX2-210ENST00000558729 NACADO15069 1562 aa32.85■■■□□ 2.85
PKNOX2-210ENST00000558729 DCAF8L2P0C7V8 631 aa32.81■■■□□ 2.84
PKNOX2-210ENST00000558729 RB1CC1Q8TDY2 1594 aa32.8■■■□□ 2.84
PKNOX2-210ENST00000558729 MYO15BQ96JP2 1530 aa32.8■■■□□ 2.84
PKNOX2-210ENST00000558729 DCAF1Q9Y4B6 1507 aa32.75■■■□□ 2.83
PKNOX2-210ENST00000558729 UNC13AQ9UPW8 1703 aa31.89■■■□□ 2.69
PKNOX2-210ENST00000558729 SCRIBQ14160 1630 aa31.84■■■□□ 2.69
PKNOX2-210ENST00000558729 BICRAQ9NZM4 1560 aa31.71■■■□□ 2.67
PKNOX2-210ENST00000558729 PABPN1Q86U42 306 aaKnown RBP eCLIP31.7■■■□□ 2.67
PKNOX2-210ENST00000558729 SHROOM4Q9ULL8 1493 aa31.6■■■□□ 2.65
PKNOX2-210ENST00000558729 DNAJC5BQ9UF47 199 aa31.46■■■□□ 2.63
PKNOX2-210ENST00000558729 EIF4G1Q04637 1599 aaKnown RBP30.89■■■□□ 2.54
PKNOX2-210ENST00000558729 CC2D2AQ9P2K1 1620 aa30.67■■■□□ 2.5
PKNOX2-210ENST00000558729 CECR2Q9BXF3 1484 aa30.63■■■□□ 2.49
PKNOX2-210ENST00000558729 BAZ1AQ9NRL2 1556 aaPredicted RBP30.6■■■□□ 2.49
PKNOX2-210ENST00000558729 SMARCA4P51532 1647 aa30.53■■■□□ 2.48
PKNOX2-210ENST00000558729 MROH2BQ7Z745 1585 aa30.37■■■□□ 2.45
PKNOX2-210ENST00000558729 SMARCA2P51531 1590 aa30.35■■■□□ 2.45
PKNOX2-210ENST00000558729 ATAD2BQ9ULI0 1458 aa30.33■■■□□ 2.45
PKNOX2-210ENST00000558729 NCAPD3P42695 1498 aa30.31■■■□□ 2.44
PKNOX2-210ENST00000558729 PEG3Q9GZU2 1588 aa30.28■■■□□ 2.44
PKNOX2-210ENST00000558729 HMGXB3Q12766 1538 aa30.18■■■□□ 2.42
PKNOX2-210ENST00000558729 RSF1Q96T23 1441 aaPredicted RBP30.16■■■□□ 2.42
PKNOX2-210ENST00000558729 BAZ1BQ9UIG0 1483 aaKnown RBP30.1■■■□□ 2.41
PKNOX2-210ENST00000558729 WIZO95785 1651 aa30.01■■■□□ 2.39
PKNOX2-210ENST00000558729 TOP2AP11388 1531 aaKnown RBP29.81■■■□□ 2.36
PKNOX2-210ENST00000558729 SUPT5HO00267 1087 aaKnown RBP29.55■■■□□ 2.32
PKNOX2-210ENST00000558729 DNAJC5Q9H3Z4 198 aa29.53■■■□□ 2.32
PKNOX2-210ENST00000558729 LAMC3Q9Y6N6 1575 aa29.45■■■□□ 2.31
PKNOX2-210ENST00000558729 CADPSQ9ULU8 1353 aa29.44■■■□□ 2.3
PKNOX2-210ENST00000558729 CCDC88BA6NC98 1476 aa29.42■■■□□ 2.3
PKNOX2-210ENST00000558729 NESP48681 1621 aa29.38■■■□□ 2.29
PKNOX2-210ENST00000558729 CFTRP13569 1480 aa29.31■■■□□ 2.28
PKNOX2-210ENST00000558729 PDS5BQ9NTI5 1447 aa29.28■■■□□ 2.28
PKNOX2-210ENST00000558729 ERCC6Q03468 1493 aa29.25■■■□□ 2.27
PKNOX2-210ENST00000558729 FANCD2Q9BXW9 1451 aa29.07■■■□□ 2.24
PKNOX2-210ENST00000558729 CEP164Q9UPV0 1460 aa29.03■■■□□ 2.24
PKNOX2-210ENST00000558729 PRDM2Q13029 1718 aa29.02■■■□□ 2.24
PKNOX2-210ENST00000558729 KIF21AQ7Z4S6 1674 aa29.01■■■□□ 2.23
PKNOX2-210ENST00000558729 MRC2Q9UBG0 1479 aa28.92■■■□□ 2.22
PKNOX2-210ENST00000558729 THOC2Q8NI27 1593 aaKnown RBP28.9■■■□□ 2.22
PKNOX2-210ENST00000558729 CUX2O14529 1486 aa28.89■■■□□ 2.22
PKNOX2-210ENST00000558729 WDR62O43379 1518 aa28.8■■■□□ 2.2
PKNOX2-210ENST00000558729 ABCC8Q09428 1581 aa28.74■■■□□ 2.19
PKNOX2-210ENST00000558729 URB2Q14146 1524 aaKnown RBP28.72■■■□□ 2.19
PKNOX2-210ENST00000558729 DNMBPQ6XZF7 1577 aa28.62■■■□□ 2.17
PKNOX2-210ENST00000558729 TOPBP1Q92547 1522 aa28.62■■■□□ 2.17
PKNOX2-210ENST00000558729 CUX1P39880 1505 aa28.48■■■□□ 2.15
PKNOX2-210ENST00000558729 WRNQ14191 1432 aaPredicted RBP eCLIP28.46■■■□□ 2.15
PKNOX2-210ENST00000558729 IFT140Q96RY7 1462 aa28.43■■■□□ 2.14
PKNOX2-210ENST00000558729 POLA1P09884 1462 aaPredicted RBP28.4■■■□□ 2.14
PKNOX2-210ENST00000558729 FGD5Q6ZNL6 1462 aa28.35■■■□□ 2.13
PKNOX2-210ENST00000558729 TOP2BQ02880 1626 aa28.34■■■□□ 2.13
PKNOX2-210ENST00000558729 SOGA1O94964 1423 aa28.31■■■□□ 2.12
PKNOX2-210ENST00000558729 BIVM-ERCC5R4GMW8 1640 aa28.31■■■□□ 2.12
PKNOX2-210ENST00000558729 SYNJ1O43426 1573 aa28.28■■■□□ 2.12
PKNOX2-210ENST00000558729 TARBP1Q13395 1621 aaKnown RBP28.26■■■□□ 2.11
PKNOX2-210ENST00000558729 RAD54L2Q9Y4B4 1467 aa28.22■■■□□ 2.11
PKNOX2-210ENST00000558729 WDR97A6NE52 1622 aa28.18■■■□□ 2.1
PKNOX2-210ENST00000558729 ZNF608Q9ULD9 1512 aaPredicted RBP28.18■■■□□ 2.1
PKNOX2-210ENST00000558729 ABCA10Q8WWZ4 1543 aa28.14■■■□□ 2.1
PKNOX2-210ENST00000558729 EIF4G3O43432 1585 aaKnown RBP28.08■■■□□ 2.09
PKNOX2-210ENST00000558729 TDRD9Q8NDG6 1382 aaKnown RBP28.08■■■□□ 2.09
PKNOX2-210ENST00000558729 AQRO60306 1485 aaKnown RBP eCLIP28.07■■■□□ 2.08
PKNOX2-210ENST00000558729 GAPVD1Q14C86 1478 aa27.98■■■□□ 2.07
PKNOX2-210ENST00000558729 GRIN2BQ13224 1484 aa27.97■■■□□ 2.07
PKNOX2-210ENST00000558729 TRIM41Q8WV44 630 aa27.97■■■□□ 2.07
PKNOX2-210ENST00000558729 ABCA5Q8WWZ7 1642 aa27.95■■■□□ 2.06
PKNOX2-210ENST00000558729 MAGI1Q96QZ7 1491 aaPredicted RBP27.88■■■□□ 2.05
PKNOX2-210ENST00000558729 KIF27Q86VH2 1401 aa27.87■■■□□ 2.05
PKNOX2-210ENST00000558729 SNAPC4Q5SXM2 1469 aa27.84■■■□□ 2.05
PKNOX2-210ENST00000558729 ERICH3Q5RHP9 1530 aa27.82■■■□□ 2.04
PKNOX2-210ENST00000558729 PBRM1Q86U86 1689 aa27.82■■■□□ 2.04
PKNOX2-210ENST00000558729 CHIC1Q5VXU3 224 aa27.77■■■□□ 2.04
PKNOX2-210ENST00000558729 SYNJ2O15056 1496 aa27.75■■■□□ 2.03
PKNOX2-210ENST00000558729 OSCARQ8IYS5 282 aa27.74■■■□□ 2.03
PKNOX2-210ENST00000558729 CHMP7Q8WUX9 453 aaPredicted RBP27.72■■■□□ 2.03
PKNOX2-210ENST00000558729 FHAD1B1AJZ9 1412 aa27.7■■■□□ 2.03
PKNOX2-210ENST00000558729 FBLN2P98095 1184 aa27.69■■■□□ 2.02
PKNOX2-210ENST00000558729 IGF1RP08069 1367 aa27.69■■■□□ 2.02
PKNOX2-210ENST00000558729 ADAMTS12P58397 1594 aa27.67■■■□□ 2.02
PKNOX2-210ENST00000558729 CHD1O14646 1710 aa27.63■■■□□ 2.01
PKNOX2-210ENST00000558729 CUL7Q14999 1698 aa27.6■■■□□ 2.01
PKNOX2-210ENST00000558729 EEA1Q15075 1411 aa27.58■■■□□ 2
PKNOX2-210ENST00000558729 GRIN2AQ12879 1464 aa27.57■■■□□ 2
PKNOX2-210ENST00000558729 RUSC2Q8N2Y8 1516 aa27.56■■■□□ 2
PKNOX2-210ENST00000558729 CARMIL1Q5VZK9 1371 aa27.54■■■□□ 2
PKNOX2-210ENST00000558729 NUP160Q12769 1436 aa27.47■■□□□ 1.99
PKNOX2-210ENST00000558729 CSRNP3Q8WYN3 585 aa27.43■■□□□ 1.98
PKNOX2-210ENST00000558729 RAPGEF2Q9Y4G8 1499 aa27.42■■□□□ 1.98
PKNOX2-210ENST00000558729 CLASP1Q7Z460 1538 aa27.41■■□□□ 1.98
PKNOX2-210ENST00000558729 PRXQ9BXM0 1461 aa27.38■■□□□ 1.97
PKNOX2-210ENST00000558729 CEP170Q5SW79 1584 aa27.37■■□□□ 1.97
PKNOX2-210ENST00000558729 KIAA0586Q9BVV6 1533 aa27.29■■□□□ 1.96
PKNOX2-210ENST00000558729 FAM9AQ8IZU1 332 aaPredicted RBP27.28■■□□□ 1.96
PKNOX2-210ENST00000558729 ARHGEF11O15085 1522 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms