RNA–Protein interactions for RNA: ENST00000558552.1

HOMER2-205, Transcript of homer scaffold protein 2, humanhuman

TSL 2

Gene HOMER2, Length 948 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER2-205ENST00000558552 NISCHQ9Y2I1 1504 aa31.65■■■□□ 2.66
HOMER2-205ENST00000558552 CCDC180Q9P1Z9 1646 aa28.11■■■□□ 2.09
HOMER2-205ENST00000558552 ABCC9O60706 1549 aa27.31■■□□□ 1.96
HOMER2-205ENST00000558552 DCAF8L2P0C7V8 631 aa26.48■■□□□ 1.83
HOMER2-205ENST00000558552 ZCCHC6Q5VYS8 1495 aaKnown RBP26.42■■□□□ 1.82
HOMER2-205ENST00000558552 RB1CC1Q8TDY2 1594 aa26.39■■□□□ 1.82
HOMER2-205ENST00000558552 NACADO15069 1562 aa26.37■■□□□ 1.81
HOMER2-205ENST00000558552 MYO15BQ96JP2 1530 aa26.22■■□□□ 1.79
HOMER2-205ENST00000558552 DCAF1Q9Y4B6 1507 aa26.19■■□□□ 1.78
HOMER2-205ENST00000558552 SCRIBQ14160 1630 aa25.7■■□□□ 1.71
HOMER2-205ENST00000558552 UNC13AQ9UPW8 1703 aa25.68■■□□□ 1.7
HOMER2-205ENST00000558552 PABPN1Q86U42 306 aaKnown RBP eCLIP25.52■■□□□ 1.68
HOMER2-205ENST00000558552 BICRAQ9NZM4 1560 aa25.44■■□□□ 1.66
HOMER2-205ENST00000558552 SHROOM4Q9ULL8 1493 aa25.33■■□□□ 1.65
HOMER2-205ENST00000558552 EIF4G1Q04637 1599 aaKnown RBP24.84■■□□□ 1.57
HOMER2-205ENST00000558552 CC2D2AQ9P2K1 1620 aa24.69■■□□□ 1.54
HOMER2-205ENST00000558552 DNAJC5BQ9UF47 199 aa24.69■■□□□ 1.54
HOMER2-205ENST00000558552 CECR2Q9BXF3 1484 aa24.59■■□□□ 1.53
HOMER2-205ENST00000558552 BAZ1AQ9NRL2 1556 aaPredicted RBP24.59■■□□□ 1.53
HOMER2-205ENST00000558552 SMARCA4P51532 1647 aa24.55■■□□□ 1.52
HOMER2-205ENST00000558552 SMARCA2P51531 1590 aa24.39■■□□□ 1.5
HOMER2-205ENST00000558552 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
HOMER2-205ENST00000558552 ATAD2BQ9ULI0 1458 aa24.33■■□□□ 1.49
HOMER2-205ENST00000558552 NCAPD3P42695 1498 aa24.26■■□□□ 1.47
HOMER2-205ENST00000558552 PEG3Q9GZU2 1588 aa24.25■■□□□ 1.47
HOMER2-205ENST00000558552 BAZ1BQ9UIG0 1483 aaKnown RBP24.24■■□□□ 1.47
HOMER2-205ENST00000558552 HMGXB3Q12766 1538 aa24.24■■□□□ 1.47
HOMER2-205ENST00000558552 RSF1Q96T23 1441 aaPredicted RBP24.16■■□□□ 1.46
HOMER2-205ENST00000558552 WIZO95785 1651 aa24.15■■□□□ 1.46
HOMER2-205ENST00000558552 TOP2AP11388 1531 aaKnown RBP23.95■■□□□ 1.43
HOMER2-205ENST00000558552 SUPT5HO00267 1087 aaKnown RBP23.81■■□□□ 1.4
HOMER2-205ENST00000558552 LAMC3Q9Y6N6 1575 aa23.67■■□□□ 1.38
HOMER2-205ENST00000558552 ERCC6Q03468 1493 aa23.64■■□□□ 1.38
HOMER2-205ENST00000558552 NESP48681 1621 aa23.63■■□□□ 1.37
HOMER2-205ENST00000558552 CCDC88BA6NC98 1476 aa23.61■■□□□ 1.37
HOMER2-205ENST00000558552 CADPSQ9ULU8 1353 aa23.6■■□□□ 1.37
HOMER2-205ENST00000558552 PDS5BQ9NTI5 1447 aa23.53■■□□□ 1.36
HOMER2-205ENST00000558552 CFTRP13569 1480 aa23.49■■□□□ 1.35
HOMER2-205ENST00000558552 KIF21AQ7Z4S6 1674 aa23.41■■□□□ 1.34
HOMER2-205ENST00000558552 PRDM2Q13029 1718 aa23.39■■□□□ 1.34
HOMER2-205ENST00000558552 FANCD2Q9BXW9 1451 aa23.38■■□□□ 1.33
HOMER2-205ENST00000558552 CEP164Q9UPV0 1460 aa23.37■■□□□ 1.33
HOMER2-205ENST00000558552 THOC2Q8NI27 1593 aaKnown RBP23.27■■□□□ 1.32
HOMER2-205ENST00000558552 MRC2Q9UBG0 1479 aa23.27■■□□□ 1.32
HOMER2-205ENST00000558552 CUX2O14529 1486 aa23.23■■□□□ 1.31
HOMER2-205ENST00000558552 WDR62O43379 1518 aa23.16■■□□□ 1.3
HOMER2-205ENST00000558552 URB2Q14146 1524 aaKnown RBP23.08■■□□□ 1.28
HOMER2-205ENST00000558552 ABCC8Q09428 1581 aa23.05■■□□□ 1.28
HOMER2-205ENST00000558552 DNMBPQ6XZF7 1577 aa23.02■■□□□ 1.28
HOMER2-205ENST00000558552 TOPBP1Q92547 1522 aa23.01■■□□□ 1.27
HOMER2-205ENST00000558552 CUX1P39880 1505 aa22.87■■□□□ 1.25
HOMER2-205ENST00000558552 WRNQ14191 1432 aaPredicted RBP eCLIP22.86■■□□□ 1.25
HOMER2-205ENST00000558552 IFT140Q96RY7 1462 aa22.85■■□□□ 1.25
HOMER2-205ENST00000558552 POLA1P09884 1462 aaPredicted RBP22.82■■□□□ 1.24
HOMER2-205ENST00000558552 FGD5Q6ZNL6 1462 aa22.82■■□□□ 1.24
HOMER2-205ENST00000558552 TOP2BQ02880 1626 aa22.76■■□□□ 1.23
HOMER2-205ENST00000558552 SYNJ1O43426 1573 aa22.76■■□□□ 1.23
HOMER2-205ENST00000558552 BIVM-ERCC5R4GMW8 1640 aa22.75■■□□□ 1.23
HOMER2-205ENST00000558552 SOGA1O94964 1423 aa22.74■■□□□ 1.23
HOMER2-205ENST00000558552 RAD54L2Q9Y4B4 1467 aa22.7■■□□□ 1.22
HOMER2-205ENST00000558552 TARBP1Q13395 1621 aaKnown RBP22.69■■□□□ 1.22
HOMER2-205ENST00000558552 EIF4G3O43432 1585 aaKnown RBP22.66■■□□□ 1.22
HOMER2-205ENST00000558552 ZNF608Q9ULD9 1512 aaPredicted RBP22.66■■□□□ 1.22
HOMER2-205ENST00000558552 WDR97A6NE52 1622 aa22.61■■□□□ 1.21
HOMER2-205ENST00000558552 ABCA10Q8WWZ4 1543 aa22.58■■□□□ 1.21
HOMER2-205ENST00000558552 AQRO60306 1485 aaKnown RBP eCLIP22.57■■□□□ 1.2
HOMER2-205ENST00000558552 TDRD9Q8NDG6 1382 aaKnown RBP22.56■■□□□ 1.2
HOMER2-205ENST00000558552 GAPVD1Q14C86 1478 aa22.5■■□□□ 1.19
HOMER2-205ENST00000558552 TRIM41Q8WV44 630 aa22.49■■□□□ 1.19
HOMER2-205ENST00000558552 ABCA5Q8WWZ7 1642 aa22.49■■□□□ 1.19
HOMER2-205ENST00000558552 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
HOMER2-205ENST00000558552 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
HOMER2-205ENST00000558552 SNAPC4Q5SXM2 1469 aa22.43■■□□□ 1.18
HOMER2-205ENST00000558552 MAGI1Q96QZ7 1491 aaPredicted RBP22.41■■□□□ 1.18
HOMER2-205ENST00000558552 KIF27Q86VH2 1401 aa22.4■■□□□ 1.18
HOMER2-205ENST00000558552 FBLN2P98095 1184 aa22.37■■□□□ 1.17
HOMER2-205ENST00000558552 ERICH3Q5RHP9 1530 aa22.34■■□□□ 1.17
HOMER2-205ENST00000558552 CHMP7Q8WUX9 453 aaPredicted RBP22.31■■□□□ 1.16
HOMER2-205ENST00000558552 CHD1O14646 1710 aa22.31■■□□□ 1.16
HOMER2-205ENST00000558552 SYNJ2O15056 1496 aa22.3■■□□□ 1.16
HOMER2-205ENST00000558552 ADAMTS12P58397 1594 aa22.29■■□□□ 1.16
HOMER2-205ENST00000558552 OSCARQ8IYS5 282 aa22.27■■□□□ 1.16
HOMER2-205ENST00000558552 FHAD1B1AJZ9 1412 aa22.24■■□□□ 1.15
HOMER2-205ENST00000558552 CUL7Q14999 1698 aa22.23■■□□□ 1.15
HOMER2-205ENST00000558552 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
HOMER2-205ENST00000558552 GRIN2AQ12879 1464 aa22.18■■□□□ 1.14
HOMER2-205ENST00000558552 DNAJC5Q9H3Z4 198 aa22.16■■□□□ 1.14
HOMER2-205ENST00000558552 IGF1RP08069 1367 aa22.15■■□□□ 1.14
HOMER2-205ENST00000558552 RUSC2Q8N2Y8 1516 aa22.11■■□□□ 1.13
HOMER2-205ENST00000558552 EEA1Q15075 1411 aa22.11■■□□□ 1.13
HOMER2-205ENST00000558552 CARMIL1Q5VZK9 1371 aa22.1■■□□□ 1.13
HOMER2-205ENST00000558552 CEP170Q5SW79 1584 aa22.04■■□□□ 1.12
HOMER2-205ENST00000558552 CLASP1Q7Z460 1538 aa22.03■■□□□ 1.12
HOMER2-205ENST00000558552 NUP160Q12769 1436 aa22.03■■□□□ 1.12
HOMER2-205ENST00000558552 FAM9AQ8IZU1 332 aaPredicted RBP22.02■■□□□ 1.12
HOMER2-205ENST00000558552 RAPGEF2Q9Y4G8 1499 aa22.02■■□□□ 1.12
HOMER2-205ENST00000558552 CSRNP3Q8WYN3 585 aa21.97■■□□□ 1.11
HOMER2-205ENST00000558552 ARHGEF11O15085 1522 aa21.92■■□□□ 1.1
HOMER2-205ENST00000558552 PRXQ9BXM0 1461 aa21.92■■□□□ 1.1
HOMER2-205ENST00000558552 RIMBP3CA6NJZ7 1639 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms