RNA–Protein interactions for RNA: ENST00000558478.1

AL136295.2-201, humanhuman

TSL 1 (best) BASIC

Gene AL136295.2, Length 747 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL136295.2-201ENST00000558478 AEBP2Q6ZN18 517 aaPredicted RBP24.11■■□□□ 1.45
AL136295.2-201ENST00000558478 NISCHQ9Y2I1 1504 aa23.39■■□□□ 1.34
AL136295.2-201ENST00000558478 CHIC1Q5VXU3 224 aa22.41■■□□□ 1.18
AL136295.2-201ENST00000558478 SENP3Q9H4L4 574 aaPredicted RBP20.61■□□□□ 0.89
AL136295.2-201ENST00000558478 CCDC180Q9P1Z9 1646 aa20.58■□□□□ 0.89
AL136295.2-201ENST00000558478 PHF23Q9BUL5 403 aaPredicted RBP20.24■□□□□ 0.83
AL136295.2-201ENST00000558478 ZCCHC6Q5VYS8 1495 aaKnown RBP19.64■□□□□ 0.73
AL136295.2-201ENST00000558478 ABCC9O60706 1549 aa19.44■□□□□ 0.7
AL136295.2-201ENST00000558478 DCAF1Q9Y4B6 1507 aa19.43■□□□□ 0.7
AL136295.2-201ENST00000558478 FOXD1Q16676 465 aa19.34■□□□□ 0.69
AL136295.2-201ENST00000558478 MYO15BQ96JP2 1530 aa19.29■□□□□ 0.68
AL136295.2-201ENST00000558478 DCAF8L2P0C7V8 631 aa19.28■□□□□ 0.68
AL136295.2-201ENST00000558478 POTEDQ86YR6 584 aa19.22■□□□□ 0.67
AL136295.2-201ENST00000558478 NACADO15069 1562 aa19.19■□□□□ 0.66
AL136295.2-201ENST00000558478 RB1CC1Q8TDY2 1594 aa19.06■□□□□ 0.64
AL136295.2-201ENST00000558478 SHROOM4Q9ULL8 1493 aa18.84■□□□□ 0.61
AL136295.2-201ENST00000558478 SCRIBQ14160 1630 aa18.78■□□□□ 0.6
AL136295.2-201ENST00000558478 UNC13AQ9UPW8 1703 aa18.54■□□□□ 0.56
AL136295.2-201ENST00000558478 BICRAQ9NZM4 1560 aa18.36■□□□□ 0.53
AL136295.2-201ENST00000558478 MSH5O43196 834 aa18.34■□□□□ 0.53
AL136295.2-201ENST00000558478 PABPN1Q86U42 306 aaKnown RBP eCLIP18.24■□□□□ 0.51
AL136295.2-201ENST00000558478 BAZ1AQ9NRL2 1556 aaPredicted RBP18.14■□□□□ 0.49
AL136295.2-201ENST00000558478 CECR2Q9BXF3 1484 aa18.08■□□□□ 0.49
AL136295.2-201ENST00000558478 SUPT5HO00267 1087 aaKnown RBP18.07■□□□□ 0.48
AL136295.2-201ENST00000558478 RSF1Q96T23 1441 aaPredicted RBP18.05■□□□□ 0.48
AL136295.2-201ENST00000558478 SMARCA4P51532 1647 aa18.03■□□□□ 0.48
AL136295.2-201ENST00000558478 MROH2BQ7Z745 1585 aa18■□□□□ 0.47
AL136295.2-201ENST00000558478 EIF4G1Q04637 1599 aaKnown RBP17.88■□□□□ 0.45
AL136295.2-201ENST00000558478 WIZO95785 1651 aa17.85■□□□□ 0.45
AL136295.2-201ENST00000558478 PEG3Q9GZU2 1588 aa17.85■□□□□ 0.45
AL136295.2-201ENST00000558478 PIAS4Q8N2W9 510 aaPredicted RBP17.84■□□□□ 0.45
AL136295.2-201ENST00000558478 SMARCA2P51531 1590 aa17.83■□□□□ 0.45
AL136295.2-201ENST00000558478 TOP2AP11388 1531 aaKnown RBP17.76■□□□□ 0.43
AL136295.2-201ENST00000558478 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
AL136295.2-201ENST00000558478 BAZ1BQ9UIG0 1483 aaKnown RBP17.69■□□□□ 0.42
AL136295.2-201ENST00000558478 HMGXB3Q12766 1538 aa17.67■□□□□ 0.42
AL136295.2-201ENST00000558478 NCAPD3P42695 1498 aa17.65■□□□□ 0.42
AL136295.2-201ENST00000558478 CC2D2AQ9P2K1 1620 aa17.63■□□□□ 0.41
AL136295.2-201ENST00000558478 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
AL136295.2-201ENST00000558478 CCDC88BA6NC98 1476 aa17.49■□□□□ 0.39
AL136295.2-201ENST00000558478 DNAJC5BQ9UF47 199 aa17.43■□□□□ 0.38
AL136295.2-201ENST00000558478 ADRA2BP18089 450 aa17.39■□□□□ 0.37
AL136295.2-201ENST00000558478 PLPPR3Q6T4P5 718 aa17.29■□□□□ 0.36
AL136295.2-201ENST00000558478 CFTRP13569 1480 aa17.21■□□□□ 0.35
AL136295.2-201ENST00000558478 CADPSQ9ULU8 1353 aa17.18■□□□□ 0.34
AL136295.2-201ENST00000558478 PRDM2Q13029 1718 aa17.18■□□□□ 0.34
AL136295.2-201ENST00000558478 LAMC3Q9Y6N6 1575 aa17.14■□□□□ 0.33
AL136295.2-201ENST00000558478 TRIM41Q8WV44 630 aa17.09■□□□□ 0.33
AL136295.2-201ENST00000558478 ABCC8Q09428 1581 aa17.05■□□□□ 0.32
AL136295.2-201ENST00000558478 WRNQ14191 1432 aaPredicted RBP eCLIP17.04■□□□□ 0.32
AL136295.2-201ENST00000558478 PDS5BQ9NTI5 1447 aa17.01■□□□□ 0.31
AL136295.2-201ENST00000558478 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
AL136295.2-201ENST00000558478 NESP48681 1621 aa16.98■□□□□ 0.31
AL136295.2-201ENST00000558478 CEP164Q9UPV0 1460 aa16.94■□□□□ 0.3
AL136295.2-201ENST00000558478 TOP2BQ02880 1626 aa16.93■□□□□ 0.3
AL136295.2-201ENST00000558478 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
AL136295.2-201ENST00000558478 BIVM-ERCC5R4GMW8 1640 aa16.92■□□□□ 0.3
AL136295.2-201ENST00000558478 CUX1P39880 1505 aa16.87■□□□□ 0.29
AL136295.2-201ENST00000558478 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
AL136295.2-201ENST00000558478 KIF21AQ7Z4S6 1674 aa16.85■□□□□ 0.29
AL136295.2-201ENST00000558478 EEA1Q15075 1411 aa16.81■□□□□ 0.28
AL136295.2-201ENST00000558478 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
AL136295.2-201ENST00000558478 TOPBP1Q92547 1522 aa16.78■□□□□ 0.28
AL136295.2-201ENST00000558478 MRC2Q9UBG0 1479 aa16.77■□□□□ 0.28
AL136295.2-201ENST00000558478 URB2Q14146 1524 aaKnown RBP16.74■□□□□ 0.27
AL136295.2-201ENST00000558478 FGD5Q6ZNL6 1462 aa16.73■□□□□ 0.27
AL136295.2-201ENST00000558478 POLA1P09884 1462 aaPredicted RBP16.68■□□□□ 0.26
AL136295.2-201ENST00000558478 WDR62O43379 1518 aa16.68■□□□□ 0.26
AL136295.2-201ENST00000558478 SOGA1O94964 1423 aa16.68■□□□□ 0.26
AL136295.2-201ENST00000558478 KIF27Q86VH2 1401 aa16.67■□□□□ 0.26
AL136295.2-201ENST00000558478 FAM9AQ8IZU1 332 aaPredicted RBP16.66■□□□□ 0.26
AL136295.2-201ENST00000558478 THOC2Q8NI27 1593 aaKnown RBP16.64■□□□□ 0.25
AL136295.2-201ENST00000558478 ABCA10Q8WWZ4 1543 aa16.62■□□□□ 0.25
AL136295.2-201ENST00000558478 CUX2O14529 1486 aa16.61■□□□□ 0.25
AL136295.2-201ENST00000558478 CSRNP3Q8WYN3 585 aa16.6■□□□□ 0.25
AL136295.2-201ENST00000558478 WDR97A6NE52 1622 aa16.57■□□□□ 0.24
AL136295.2-201ENST00000558478 RUSC2Q8N2Y8 1516 aa16.57■□□□□ 0.24
AL136295.2-201ENST00000558478 IFT140Q96RY7 1462 aa16.56■□□□□ 0.24
AL136295.2-201ENST00000558478 RAD54L2Q9Y4B4 1467 aa16.56■□□□□ 0.24
AL136295.2-201ENST00000558478 KIF21BO75037 1637 aa16.54■□□□□ 0.24
AL136295.2-201ENST00000558478 TARBP1Q13395 1621 aaKnown RBP16.53■□□□□ 0.24
AL136295.2-201ENST00000558478 GOLGA3Q08378 1498 aa16.52■□□□□ 0.23
AL136295.2-201ENST00000558478 ABCA5Q8WWZ7 1642 aa16.49■□□□□ 0.23
AL136295.2-201ENST00000558478 ERICH3Q5RHP9 1530 aa16.49■□□□□ 0.23
AL136295.2-201ENST00000558478 GAPVD1Q14C86 1478 aa16.47■□□□□ 0.23
AL136295.2-201ENST00000558478 LOC105371045A0A1W2PR82 267 aa16.46■□□□□ 0.23
AL136295.2-201ENST00000558478 PRXQ9BXM0 1461 aa16.46■□□□□ 0.23
AL136295.2-201ENST00000558478 CUL7Q14999 1698 aa16.46■□□□□ 0.23
AL136295.2-201ENST00000558478 IGF1RP08069 1367 aa16.43■□□□□ 0.22
AL136295.2-201ENST00000558478 TDRD9Q8NDG6 1382 aaKnown RBP16.42■□□□□ 0.22
AL136295.2-201ENST00000558478 CARMIL1Q5VZK9 1371 aa16.39■□□□□ 0.21
AL136295.2-201ENST00000558478 TNIKQ9UKE5 1360 aa16.39■□□□□ 0.21
AL136295.2-201ENST00000558478 GRIN2BQ13224 1484 aa16.39■□□□□ 0.21
AL136295.2-201ENST00000558478 RAPGEF2Q9Y4G8 1499 aa16.39■□□□□ 0.21
AL136295.2-201ENST00000558478 PBRM1Q86U86 1689 aa16.39■□□□□ 0.21
AL136295.2-201ENST00000558478 UBTFP17480 764 aaKnown RBP16.38■□□□□ 0.21
AL136295.2-201ENST00000558478 EIF4G3O43432 1585 aaKnown RBP16.38■□□□□ 0.21
AL136295.2-201ENST00000558478 EHMT2Q96KQ7 1210 aa16.37■□□□□ 0.21
AL136295.2-201ENST00000558478 AQRO60306 1485 aaKnown RBP eCLIP16.35■□□□□ 0.211e-9■■■■■ 37.7
AL136295.2-201ENST00000558478 ZNF608Q9ULD9 1512 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms