RNA–Protein interactions for RNA: ENST00000558364.1

RMDN3-205, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 582 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-205ENST00000558364 NISCHQ9Y2I1 1504 aa34.35■■■■□ 3.09
RMDN3-205ENST00000558364 CCDC180Q9P1Z9 1646 aa30.34■■■□□ 2.45
RMDN3-205ENST00000558364 ABCC9O60706 1549 aa29.56■■■□□ 2.32
RMDN3-205ENST00000558364 DCAF8L2P0C7V8 631 aa28.7■■■□□ 2.18
RMDN3-205ENST00000558364 ZCCHC6Q5VYS8 1495 aaKnown RBP28.64■■■□□ 2.17
RMDN3-205ENST00000558364 NACADO15069 1562 aa28.55■■■□□ 2.16
RMDN3-205ENST00000558364 RB1CC1Q8TDY2 1594 aa28.5■■■□□ 2.15
RMDN3-205ENST00000558364 MYO15BQ96JP2 1530 aa28.48■■■□□ 2.15
RMDN3-205ENST00000558364 DCAF1Q9Y4B6 1507 aa28.43■■■□□ 2.14
RMDN3-205ENST00000558364 UNC13AQ9UPW8 1703 aa27.76■■■□□ 2.03
RMDN3-205ENST00000558364 PABPN1Q86U42 306 aaKnown RBP eCLIP27.74■■■□□ 2.03
RMDN3-205ENST00000558364 SCRIBQ14160 1630 aa27.73■■■□□ 2.03
RMDN3-205ENST00000558364 BICRAQ9NZM4 1560 aa27.64■■■□□ 2.01
RMDN3-205ENST00000558364 SHROOM4Q9ULL8 1493 aa27.38■■□□□ 1.97
RMDN3-205ENST00000558364 DNAJC5BQ9UF47 199 aa27.02■■□□□ 1.92
RMDN3-205ENST00000558364 EIF4G1Q04637 1599 aaKnown RBP26.88■■□□□ 1.89
RMDN3-205ENST00000558364 CECR2Q9BXF3 1484 aa26.75■■□□□ 1.87
RMDN3-205ENST00000558364 CC2D2AQ9P2K1 1620 aa26.72■■□□□ 1.87
RMDN3-205ENST00000558364 BAZ1AQ9NRL2 1556 aaPredicted RBP26.58■■□□□ 1.85
RMDN3-205ENST00000558364 SMARCA4P51532 1647 aa26.55■■□□□ 1.84
RMDN3-205ENST00000558364 MROH2BQ7Z745 1585 aa26.48■■□□□ 1.83
RMDN3-205ENST00000558364 ATAD2BQ9ULI0 1458 aa26.42■■□□□ 1.82
RMDN3-205ENST00000558364 NCAPD3P42695 1498 aa26.39■■□□□ 1.82
RMDN3-205ENST00000558364 SMARCA2P51531 1590 aa26.37■■□□□ 1.81
RMDN3-205ENST00000558364 PEG3Q9GZU2 1588 aa26.31■■□□□ 1.8
RMDN3-205ENST00000558364 RSF1Q96T23 1441 aaPredicted RBP26.3■■□□□ 1.8
RMDN3-205ENST00000558364 HMGXB3Q12766 1538 aa26.21■■□□□ 1.79
RMDN3-205ENST00000558364 BAZ1BQ9UIG0 1483 aaKnown RBP26.19■■□□□ 1.78
RMDN3-205ENST00000558364 WIZO95785 1651 aa26.15■■□□□ 1.78
RMDN3-205ENST00000558364 TOP2AP11388 1531 aaKnown RBP25.9■■□□□ 1.74
RMDN3-205ENST00000558364 SUPT5HO00267 1087 aaKnown RBP25.84■■□□□ 1.73
RMDN3-205ENST00000558364 CADPSQ9ULU8 1353 aa25.66■■□□□ 1.7
RMDN3-205ENST00000558364 CCDC88BA6NC98 1476 aa25.66■■□□□ 1.7
RMDN3-205ENST00000558364 NESP48681 1621 aa25.65■■□□□ 1.7
RMDN3-205ENST00000558364 LAMC3Q9Y6N6 1575 aa25.59■■□□□ 1.69
RMDN3-205ENST00000558364 CFTRP13569 1480 aa25.52■■□□□ 1.68
RMDN3-205ENST00000558364 PDS5BQ9NTI5 1447 aa25.48■■□□□ 1.67
RMDN3-205ENST00000558364 ERCC6Q03468 1493 aa25.46■■□□□ 1.67
RMDN3-205ENST00000558364 FANCD2Q9BXW9 1451 aa25.31■■□□□ 1.64
RMDN3-205ENST00000558364 KIF21AQ7Z4S6 1674 aa25.25■■□□□ 1.63
RMDN3-205ENST00000558364 CEP164Q9UPV0 1460 aa25.23■■□□□ 1.63
RMDN3-205ENST00000558364 PRDM2Q13029 1718 aa25.17■■□□□ 1.62
RMDN3-205ENST00000558364 MRC2Q9UBG0 1479 aa25.16■■□□□ 1.62
RMDN3-205ENST00000558364 THOC2Q8NI27 1593 aaKnown RBP25.14■■□□□ 1.62
RMDN3-205ENST00000558364 CUX2O14529 1486 aa25.11■■□□□ 1.61
RMDN3-205ENST00000558364 WDR62O43379 1518 aa25.05■■□□□ 1.6
RMDN3-205ENST00000558364 URB2Q14146 1524 aaKnown RBP25.03■■□□□ 1.6
RMDN3-205ENST00000558364 DNAJC5Q9H3Z4 198 aa24.96■■□□□ 1.59
RMDN3-205ENST00000558364 ABCC8Q09428 1581 aa24.96■■□□□ 1.59
RMDN3-205ENST00000558364 TOPBP1Q92547 1522 aa24.92■■□□□ 1.58
RMDN3-205ENST00000558364 DNMBPQ6XZF7 1577 aa24.88■■□□□ 1.57
RMDN3-205ENST00000558364 CUX1P39880 1505 aa24.81■■□□□ 1.56
RMDN3-205ENST00000558364 WRNQ14191 1432 aaPredicted RBP eCLIP24.78■■□□□ 1.56
RMDN3-205ENST00000558364 POLA1P09884 1462 aaPredicted RBP24.73■■□□□ 1.55
RMDN3-205ENST00000558364 IFT140Q96RY7 1462 aa24.72■■□□□ 1.55
RMDN3-205ENST00000558364 FGD5Q6ZNL6 1462 aa24.7■■□□□ 1.54
RMDN3-205ENST00000558364 SOGA1O94964 1423 aa24.68■■□□□ 1.54
RMDN3-205ENST00000558364 TOP2BQ02880 1626 aa24.64■■□□□ 1.53
RMDN3-205ENST00000558364 RAD54L2Q9Y4B4 1467 aa24.64■■□□□ 1.53
RMDN3-205ENST00000558364 SYNJ1O43426 1573 aa24.63■■□□□ 1.53
RMDN3-205ENST00000558364 TARBP1Q13395 1621 aaKnown RBP24.6■■□□□ 1.53
RMDN3-205ENST00000558364 BIVM-ERCC5R4GMW8 1640 aa24.6■■□□□ 1.53
RMDN3-205ENST00000558364 ZNF608Q9ULD9 1512 aaPredicted RBP24.59■■□□□ 1.53
RMDN3-205ENST00000558364 TDRD9Q8NDG6 1382 aaKnown RBP24.52■■□□□ 1.52
RMDN3-205ENST00000558364 AQRO60306 1485 aaKnown RBP eCLIP24.51■■□□□ 1.51
RMDN3-205ENST00000558364 ABCA10Q8WWZ4 1543 aa24.49■■□□□ 1.51
RMDN3-205ENST00000558364 EIF4G3O43432 1585 aaKnown RBP24.42■■□□□ 1.5
RMDN3-205ENST00000558364 TRIM41Q8WV44 630 aa24.41■■□□□ 1.5
RMDN3-205ENST00000558364 WDR97A6NE52 1622 aa24.4■■□□□ 1.5
RMDN3-205ENST00000558364 GAPVD1Q14C86 1478 aa24.37■■□□□ 1.49
RMDN3-205ENST00000558364 GRIN2BQ13224 1484 aa24.33■■□□□ 1.49
RMDN3-205ENST00000558364 ABCA5Q8WWZ7 1642 aa24.3■■□□□ 1.48
RMDN3-205ENST00000558364 CHIC1Q5VXU3 224 aa24.28■■□□□ 1.48
RMDN3-205ENST00000558364 KIF27Q86VH2 1401 aa24.25■■□□□ 1.47
RMDN3-205ENST00000558364 SNAPC4Q5SXM2 1469 aa24.24■■□□□ 1.47
RMDN3-205ENST00000558364 MAGI1Q96QZ7 1491 aaPredicted RBP24.23■■□□□ 1.47
RMDN3-205ENST00000558364 FBLN2P98095 1184 aa24.2■■□□□ 1.46
RMDN3-205ENST00000558364 OSCARQ8IYS5 282 aa24.2■■□□□ 1.46
RMDN3-205ENST00000558364 CHMP7Q8WUX9 453 aaPredicted RBP24.18■■□□□ 1.46
RMDN3-205ENST00000558364 ERICH3Q5RHP9 1530 aa24.18■■□□□ 1.46
RMDN3-205ENST00000558364 PBRM1Q86U86 1689 aa24.18■■□□□ 1.46
RMDN3-205ENST00000558364 IGF1RP08069 1367 aa24.17■■□□□ 1.46
RMDN3-205ENST00000558364 SYNJ2O15056 1496 aa24.13■■□□□ 1.45
RMDN3-205ENST00000558364 FHAD1B1AJZ9 1412 aa24.1■■□□□ 1.45
RMDN3-205ENST00000558364 RUSC2Q8N2Y8 1516 aa24.09■■□□□ 1.45
RMDN3-205ENST00000558364 ADAMTS12P58397 1594 aa24.06■■□□□ 1.44
RMDN3-205ENST00000558364 CHD1O14646 1710 aa24.04■■□□□ 1.44
RMDN3-205ENST00000558364 CARMIL1Q5VZK9 1371 aa24.01■■□□□ 1.43
RMDN3-205ENST00000558364 GRIN2AQ12879 1464 aa24■■□□□ 1.43
RMDN3-205ENST00000558364 CUL7Q14999 1698 aa23.95■■□□□ 1.42
RMDN3-205ENST00000558364 EEA1Q15075 1411 aa23.93■■□□□ 1.42
RMDN3-205ENST00000558364 CSRNP3Q8WYN3 585 aa23.93■■□□□ 1.42
RMDN3-205ENST00000558364 NUP160Q12769 1436 aa23.91■■□□□ 1.42
RMDN3-205ENST00000558364 FAM9AQ8IZU1 332 aaPredicted RBP23.88■■□□□ 1.41
RMDN3-205ENST00000558364 RAPGEF2Q9Y4G8 1499 aa23.86■■□□□ 1.41
RMDN3-205ENST00000558364 CLASP1Q7Z460 1538 aa23.85■■□□□ 1.41
RMDN3-205ENST00000558364 CEP170Q5SW79 1584 aa23.84■■□□□ 1.41
RMDN3-205ENST00000558364 PRXQ9BXM0 1461 aa23.84■■□□□ 1.41
RMDN3-205ENST00000558364 KIAA0586Q9BVV6 1533 aa23.75■■□□□ 1.39
RMDN3-205ENST00000558364 JPH4Q96JJ6 628 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms