RNA–Protein interactions for RNA: ENST00000558060.1

RYR3-204, Transcript of ryanodine receptor 3, humanhuman

TSL 3

Gene RYR3, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RYR3-204ENST00000558060 NISCHQ9Y2I1 1504 aa17.5■□□□□ 0.39
RYR3-204ENST00000558060 AEBP2Q6ZN18 517 aaPredicted RBP17.38■□□□□ 0.37
RYR3-204ENST00000558060 CHIC1Q5VXU3 224 aa17.02■□□□□ 0.32
RYR3-204ENST00000558060 CCDC180Q9P1Z9 1646 aa15.31■□□□□ 0.04
RYR3-204ENST00000558060 SENP3Q9H4L4 574 aaPredicted RBP14.94□□□□□ -0.02
RYR3-204ENST00000558060 PHF23Q9BUL5 403 aaPredicted RBP14.87□□□□□ -0.03
RYR3-204ENST00000558060 ZCCHC6Q5VYS8 1495 aaKnown RBP14.73□□□□□ -0.05
RYR3-204ENST00000558060 DCAF1Q9Y4B6 1507 aa14.56□□□□□ -0.08
RYR3-204ENST00000558060 DCAF8L2P0C7V8 631 aa14.39□□□□□ -0.11
RYR3-204ENST00000558060 MYO15BQ96JP2 1530 aa14.38□□□□□ -0.11
RYR3-204ENST00000558060 ABCC9O60706 1549 aa14.25□□□□□ -0.13
RYR3-204ENST00000558060 NACADO15069 1562 aa14.24□□□□□ -0.13
RYR3-204ENST00000558060 SHROOM4Q9ULL8 1493 aa14.23□□□□□ -0.13
RYR3-204ENST00000558060 RB1CC1Q8TDY2 1594 aa14.09□□□□□ -0.15
RYR3-204ENST00000558060 SCRIBQ14160 1630 aa13.97□□□□□ -0.17
RYR3-204ENST00000558060 PLPPR3Q6T4P5 718 aa13.89□□□□□ -0.19
RYR3-204ENST00000558060 SUPT5HO00267 1087 aaKnown RBP13.8□□□□□ -0.2
RYR3-204ENST00000558060 FOXD1Q16676 465 aa13.77□□□□□ -0.21
RYR3-204ENST00000558060 UNC13AQ9UPW8 1703 aa13.67□□□□□ -0.22
RYR3-204ENST00000558060 RSF1Q96T23 1441 aaPredicted RBP13.58□□□□□ -0.24
RYR3-204ENST00000558060 BAZ1AQ9NRL2 1556 aaPredicted RBP13.58□□□□□ -0.24
RYR3-204ENST00000558060 BICRAQ9NZM4 1560 aa13.51□□□□□ -0.25
RYR3-204ENST00000558060 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
RYR3-204ENST00000558060 MROH2BQ7Z745 1585 aa13.46□□□□□ -0.25
RYR3-204ENST00000558060 SMARCA4P51532 1647 aa13.44□□□□□ -0.26
RYR3-204ENST00000558060 PABPN1Q86U42 306 aaKnown RBP eCLIP13.41□□□□□ -0.26
RYR3-204ENST00000558060 WIZO95785 1651 aa13.36□□□□□ -0.27
RYR3-204ENST00000558060 TOP2AP11388 1531 aaKnown RBP13.32□□□□□ -0.28
RYR3-204ENST00000558060 PEG3Q9GZU2 1588 aa13.3□□□□□ -0.28
RYR3-204ENST00000558060 SMARCA2P51531 1590 aa13.28□□□□□ -0.28
RYR3-204ENST00000558060 ADRA2BP18089 450 aa13.22□□□□□ -0.29
RYR3-204ENST00000558060 ATAD2BQ9ULI0 1458 aa13.18□□□□□ -0.3
RYR3-204ENST00000558060 BAZ1BQ9UIG0 1483 aaKnown RBP13.16□□□□□ -0.3
RYR3-204ENST00000558060 EIF4G1Q04637 1599 aaKnown RBP13.16□□□□□ -0.3
RYR3-204ENST00000558060 PPP6R1Q9UPN7 881 aa13.15□□□□□ -0.3
RYR3-204ENST00000558060 CCDC88BA6NC98 1476 aa13.11□□□□□ -0.31
RYR3-204ENST00000558060 HMGXB3Q12766 1538 aa13.11□□□□□ -0.31
RYR3-204ENST00000558060 NCAPD3P42695 1498 aa13.09□□□□□ -0.31
RYR3-204ENST00000558060 PIAS4Q8N2W9 510 aaPredicted RBP13.08□□□□□ -0.32
RYR3-204ENST00000558060 TRIM41Q8WV44 630 aa13.05□□□□□ -0.32
RYR3-204ENST00000558060 CC2D2AQ9P2K1 1620 aa12.93□□□□□ -0.34
RYR3-204ENST00000558060 MSH5O43196 834 aa12.85□□□□□ -0.35
RYR3-204ENST00000558060 WRNQ14191 1432 aaPredicted RBP eCLIP12.84□□□□□ -0.35
RYR3-204ENST00000558060 ABCC8Q09428 1581 aa12.82□□□□□ -0.36
RYR3-204ENST00000558060 EEA1Q15075 1411 aa12.82□□□□□ -0.36
RYR3-204ENST00000558060 PRDM2Q13029 1718 aa12.81□□□□□ -0.36
RYR3-204ENST00000558060 CFTRP13569 1480 aa12.8□□□□□ -0.36
RYR3-204ENST00000558060 CADPSQ9ULU8 1353 aa12.76□□□□□ -0.37
RYR3-204ENST00000558060 TOP2BQ02880 1626 aa12.72□□□□□ -0.37
RYR3-204ENST00000558060 BIVM-ERCC5R4GMW8 1640 aa12.71□□□□□ -0.37
RYR3-204ENST00000558060 SYNJ1O43426 1573 aa12.7□□□□□ -0.38
RYR3-204ENST00000558060 FAM9AQ8IZU1 332 aaPredicted RBP12.7□□□□□ -0.38
RYR3-204ENST00000558060 LAMC3Q9Y6N6 1575 aa12.68□□□□□ -0.38
RYR3-204ENST00000558060 LOC105371045A0A1W2PR82 267 aa12.67□□□□□ -0.38
RYR3-204ENST00000558060 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
RYR3-204ENST00000558060 FANCD2Q9BXW9 1451 aa12.61□□□□□ -0.39
RYR3-204ENST00000558060 SOGA1O94964 1423 aa12.61□□□□□ -0.39
RYR3-204ENST00000558060 CUX1P39880 1505 aa12.6□□□□□ -0.39
RYR3-204ENST00000558060 PDS5BQ9NTI5 1447 aa12.59□□□□□ -0.39
RYR3-204ENST00000558060 GOLGA3Q08378 1498 aa12.58□□□□□ -0.4
RYR3-204ENST00000558060 CEP164Q9UPV0 1460 aa12.58□□□□□ -0.4
RYR3-204ENST00000558060 KIF21BO75037 1637 aa12.56□□□□□ -0.4
RYR3-204ENST00000558060 KIF27Q86VH2 1401 aa12.55□□□□□ -0.4
RYR3-204ENST00000558060 DNMBPQ6XZF7 1577 aa12.54□□□□□ -0.4
RYR3-204ENST00000558060 TNIKQ9UKE5 1360 aa12.54□□□□□ -0.4
RYR3-204ENST00000558060 RUSC2Q8N2Y8 1516 aa12.5□□□□□ -0.41
RYR3-204ENST00000558060 NESP48681 1621 aa12.49□□□□□ -0.41
RYR3-204ENST00000558060 UBTFP17480 764 aaKnown RBP12.49□□□□□ -0.41
RYR3-204ENST00000558060 ERICH3Q5RHP9 1530 aa12.48□□□□□ -0.41
RYR3-204ENST00000558060 FGD5Q6ZNL6 1462 aa12.48□□□□□ -0.41
RYR3-204ENST00000558060 TOPBP1Q92547 1522 aa12.47□□□□□ -0.41
RYR3-204ENST00000558060 EHMT2Q96KQ7 1210 aa12.45□□□□□ -0.42
RYR3-204ENST00000558060 CUX2O14529 1486 aa12.44□□□□□ -0.42
RYR3-204ENST00000558060 CEP162Q5TB80 1403 aa12.44□□□□□ -0.42
RYR3-204ENST00000558060 PRXQ9BXM0 1461 aa12.41□□□□□ -0.42
RYR3-204ENST00000558060 ABCA10Q8WWZ4 1543 aa12.41□□□□□ -0.42
RYR3-204ENST00000558060 KIF21AQ7Z4S6 1674 aa12.4□□□□□ -0.42
RYR3-204ENST00000558060 POLA1P09884 1462 aaPredicted RBP12.4□□□□□ -0.43
RYR3-204ENST00000558060 URB2Q14146 1524 aaKnown RBP12.39□□□□□ -0.43
RYR3-204ENST00000558060 MRC2Q9UBG0 1479 aa12.38□□□□□ -0.43
RYR3-204ENST00000558060 RAPGEF2Q9Y4G8 1499 aa12.37□□□□□ -0.43
RYR3-204ENST00000558060 TRIM26Q12899 539 aaPredicted RBP12.36□□□□□ -0.43
RYR3-204ENST00000558060 CLIP1P30622 1438 aa12.35□□□□□ -0.43
RYR3-204ENST00000558060 CUL7Q14999 1698 aa12.35□□□□□ -0.43
RYR3-204ENST00000558060 IGF1RP08069 1367 aa12.33□□□□□ -0.44
RYR3-204ENST00000558060 DNAJC5BQ9UF47 199 aa12.33□□□□□ -0.44
RYR3-204ENST00000558060 CARMIL1Q5VZK9 1371 aa12.32□□□□□ -0.44
RYR3-204ENST00000558060 WDR97A6NE52 1622 aa12.32□□□□□ -0.44
RYR3-204ENST00000558060 ERCC6Q03468 1493 aa12.31□□□□□ -0.44
RYR3-204ENST00000558060 RAD54L2Q9Y4B4 1467 aa12.31□□□□□ -0.44
RYR3-204ENST00000558060 WDR62O43379 1518 aa12.28□□□□□ -0.44
RYR3-204ENST00000558060 SCAF1Q9H7N4 1312 aaKnown RBP12.28□□□□□ -0.44
RYR3-204ENST00000558060 ABCA5Q8WWZ7 1642 aa12.27□□□□□ -0.44
RYR3-204ENST00000558060 PCGF6Q9BYE7 350 aa12.27□□□□□ -0.45
RYR3-204ENST00000558060 GAPVD1Q14C86 1478 aa12.27□□□□□ -0.45
RYR3-204ENST00000558060 IFT140Q96RY7 1462 aa12.27□□□□□ -0.45
RYR3-204ENST00000558060 APLP2Q06481 763 aa12.26□□□□□ -0.45
RYR3-204ENST00000558060 VPS8Q8N3P4 1428 aa12.26□□□□□ -0.45
RYR3-204ENST00000558060 TARBP1Q13395 1621 aaKnown RBP12.25□□□□□ -0.45
RYR3-204ENST00000558060 TDRD9Q8NDG6 1382 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms