RNA–Protein interactions for RNA: ENST00000557950.5

SLTM-213, Transcript of SAFB like transcription modulator, humanhuman

TSL 3

Gene SLTM, Length 924 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-213ENST00000557950 AEBP2Q6ZN18 517 aaPredicted RBP20.06■□□□□ 0.8
SLTM-213ENST00000557950 CHIC1Q5VXU3 224 aa19.54■□□□□ 0.72
SLTM-213ENST00000557950 NISCHQ9Y2I1 1504 aa18.43■□□□□ 0.54
SLTM-213ENST00000557950 SENP3Q9H4L4 574 aaPredicted RBP17.17■□□□□ 0.34
SLTM-213ENST00000557950 PHF23Q9BUL5 403 aaPredicted RBP17.1■□□□□ 0.33
SLTM-213ENST00000557950 ABCC9O60706 1549 aa16.9■□□□□ 0.3
SLTM-213ENST00000557950 CCDC180Q9P1Z9 1646 aa16.64■□□□□ 0.25
SLTM-213ENST00000557950 DNAJC5BQ9UF47 199 aa16.12■□□□□ 0.17
SLTM-213ENST00000557950 RB1CC1Q8TDY2 1594 aa15.95■□□□□ 0.14
SLTM-213ENST00000557950 FOXD1Q16676 465 aa15.87■□□□□ 0.13
SLTM-213ENST00000557950 PLPPR3Q6T4P5 718 aa15.87■□□□□ 0.13
SLTM-213ENST00000557950 NACADO15069 1562 aa15.78■□□□□ 0.12
SLTM-213ENST00000557950 PABPN1Q86U42 306 aaKnown RBP eCLIP15.68■□□□□ 0.1
SLTM-213ENST00000557950 UNC13AQ9UPW8 1703 aa15.65■□□□□ 0.1
SLTM-213ENST00000557950 DCAF8L2P0C7V8 631 aa15.57■□□□□ 0.08
SLTM-213ENST00000557950 BICRAQ9NZM4 1560 aa15.56■□□□□ 0.08
SLTM-213ENST00000557950 MYO15BQ96JP2 1530 aa15.49■□□□□ 0.07
SLTM-213ENST00000557950 SHROOM4Q9ULL8 1493 aa15.27■□□□□ 0.04
SLTM-213ENST00000557950 CC2D2AQ9P2K1 1620 aa15.26■□□□□ 0.03
SLTM-213ENST00000557950 CECR2Q9BXF3 1484 aa15.25■□□□□ 0.03
SLTM-213ENST00000557950 ZCCHC6Q5VYS8 1495 aaKnown RBP15.23■□□□□ 0.03
SLTM-213ENST00000557950 DCAF1Q9Y4B6 1507 aa15.2■□□□□ 0.02
SLTM-213ENST00000557950 EIF4G1Q04637 1599 aaKnown RBP15.17■□□□□ 0.02
SLTM-213ENST00000557950 SCRIBQ14160 1630 aa15.15■□□□□ 0.02
SLTM-213ENST00000557950 ADRA2BP18089 450 aa15.15■□□□□ 0.02
SLTM-213ENST00000557950 PPP6R1Q9UPN7 881 aa15.13■□□□□ 0.01
SLTM-213ENST00000557950 PIAS4Q8N2W9 510 aaPredicted RBP15.01□□□□□ -0.01
SLTM-213ENST00000557950 DNAJC5Q9H3Z4 198 aa14.95□□□□□ -0.02
SLTM-213ENST00000557950 MSH5O43196 834 aa14.88□□□□□ -0.03
SLTM-213ENST00000557950 CUX2O14529 1486 aa14.66□□□□□ -0.06
SLTM-213ENST00000557950 NCAPD3P42695 1498 aa14.58□□□□□ -0.08
SLTM-213ENST00000557950 POTEDQ86YR6 584 aa14.58□□□□□ -0.08
SLTM-213ENST00000557950 ERCC6Q03468 1493 aa14.57□□□□□ -0.08
SLTM-213ENST00000557950 ATAD2BQ9ULI0 1458 aa14.51□□□□□ -0.09
SLTM-213ENST00000557950 NESP48681 1621 aa14.47□□□□□ -0.09
SLTM-213ENST00000557950 HMGXB3Q12766 1538 aa14.46□□□□□ -0.1
SLTM-213ENST00000557950 SMARCA2P51531 1590 aa14.43□□□□□ -0.1
SLTM-213ENST00000557950 SMARCA4P51532 1647 aa14.43□□□□□ -0.1
SLTM-213ENST00000557950 THOC2Q8NI27 1593 aaKnown RBP14.39□□□□□ -0.11
SLTM-213ENST00000557950 BAZ1BQ9UIG0 1483 aaKnown RBP14.33□□□□□ -0.12
SLTM-213ENST00000557950 PEG3Q9GZU2 1588 aa14.3□□□□□ -0.12
SLTM-213ENST00000557950 BAZ1AQ9NRL2 1556 aaPredicted RBP14.3□□□□□ -0.12
SLTM-213ENST00000557950 LAMC3Q9Y6N6 1575 aa14.29□□□□□ -0.12
SLTM-213ENST00000557950 KIF21AQ7Z4S6 1674 aa14.27□□□□□ -0.12
SLTM-213ENST00000557950 MROH2BQ7Z745 1585 aa14.21□□□□□ -0.14
SLTM-213ENST00000557950 PDS5BQ9NTI5 1447 aa14.19□□□□□ -0.14
SLTM-213ENST00000557950 TRIM41Q8WV44 630 aa14.15□□□□□ -0.14
SLTM-213ENST00000557950 CADPSQ9ULU8 1353 aa14.11□□□□□ -0.15
SLTM-213ENST00000557950 MRC2Q9UBG0 1479 aa14.11□□□□□ -0.15
SLTM-213ENST00000557950 WDR62O43379 1518 aa14.1□□□□□ -0.15
SLTM-213ENST00000557950 WIZO95785 1651 aa14.02□□□□□ -0.16
SLTM-213ENST00000557950 CEP164Q9UPV0 1460 aa13.99□□□□□ -0.17
SLTM-213ENST00000557950 SCAF1Q9H7N4 1312 aaKnown RBP13.98□□□□□ -0.17
SLTM-213ENST00000557950 FANCD2Q9BXW9 1451 aa13.96□□□□□ -0.17
SLTM-213ENST00000557950 PPP4R3CPQ6ZMV5 832 aa13.93□□□□□ -0.18
SLTM-213ENST00000557950 CFTRP13569 1480 aa13.93□□□□□ -0.18
SLTM-213ENST00000557950 OSCARQ8IYS5 282 aa13.91□□□□□ -0.18
SLTM-213ENST00000557950 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.19
SLTM-213ENST00000557950 TOP2AP11388 1531 aaKnown RBP13.82□□□□□ -0.2
SLTM-213ENST00000557950 RIMBP3CA6NJZ7 1639 aa13.82□□□□□ -0.2
SLTM-213ENST00000557950 RIMBP3BA6NNM3 1639 aa13.82□□□□□ -0.2
SLTM-213ENST00000557950 RIMBP3Q9UFD9 1639 aa13.82□□□□□ -0.2
SLTM-213ENST00000557950 RSF1Q96T23 1441 aaPredicted RBP13.81□□□□□ -0.2
SLTM-213ENST00000557950 ZNF608Q9ULD9 1512 aaPredicted RBP13.77□□□□□ -0.21
SLTM-213ENST00000557950 PRDM2Q13029 1718 aa13.76□□□□□ -0.21
SLTM-213ENST00000557950 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
SLTM-213ENST00000557950 ARHGEF11O15085 1522 aa13.75□□□□□ -0.21
SLTM-213ENST00000557950 IFT140Q96RY7 1462 aa13.73□□□□□ -0.21
SLTM-213ENST00000557950 TOPBP1Q92547 1522 aa13.68□□□□□ -0.22
SLTM-213ENST00000557950 EIF4G3O43432 1585 aaKnown RBP13.67□□□□□ -0.22
SLTM-213ENST00000557950 CCDC88BA6NC98 1476 aa13.65□□□□□ -0.22
SLTM-213ENST00000557950 DMRT2Q9Y5R5 561 aa13.64□□□□□ -0.23
SLTM-213ENST00000557950 CHD1O14646 1710 aa13.62□□□□□ -0.23
SLTM-213ENST00000557950 ARAP1Q96P48 1450 aa13.61□□□□□ -0.23
SLTM-213ENST00000557950 NCBP3Q53F19 620 aaKnown RBP13.61□□□□□ -0.23
SLTM-213ENST00000557950 CYB5RLQ6IPT4 315 aa13.61□□□□□ -0.23
SLTM-213ENST00000557950 DNMBPQ6XZF7 1577 aa13.6□□□□□ -0.23
SLTM-213ENST00000557950 CNKSR2Q8WXI2 1034 aa13.6□□□□□ -0.23
SLTM-213ENST00000557950 TARBP1Q13395 1621 aaKnown RBP13.6□□□□□ -0.23
SLTM-213ENST00000557950 AQRO60306 1485 aaKnown RBP eCLIP13.59□□□□□ -0.233e-11■■■□□ 15.7
SLTM-213ENST00000557950 ABCC8Q09428 1581 aa13.58□□□□□ -0.23
SLTM-213ENST00000557950 POLA1P09884 1462 aaPredicted RBP13.54□□□□□ -0.24
SLTM-213ENST00000557950 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
SLTM-213ENST00000557950 FBLN2P98095 1184 aa13.49□□□□□ -0.25
SLTM-213ENST00000557950 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
SLTM-213ENST00000557950 CLASP1Q7Z460 1538 aa13.47□□□□□ -0.25
SLTM-213ENST00000557950 TDRD9Q8NDG6 1382 aaKnown RBP13.45□□□□□ -0.26
SLTM-213ENST00000557950 SNAPC4Q5SXM2 1469 aa13.44□□□□□ -0.26
SLTM-213ENST00000557950 KCNA4P22459 653 aa13.43□□□□□ -0.26
SLTM-213ENST00000557950 SOGA1O94964 1423 aa13.42□□□□□ -0.26
SLTM-213ENST00000557950 WDR97A6NE52 1622 aa13.4□□□□□ -0.26
SLTM-213ENST00000557950 FGD5Q6ZNL6 1462 aa13.4□□□□□ -0.26
SLTM-213ENST00000557950 SYNJ1O43426 1573 aa13.39□□□□□ -0.27
SLTM-213ENST00000557950 MAGI1Q96QZ7 1491 aaPredicted RBP13.38□□□□□ -0.27
SLTM-213ENST00000557950 CUX1P39880 1505 aa13.36□□□□□ -0.27
SLTM-213ENST00000557950 CHMP7Q8WUX9 453 aaPredicted RBP13.35□□□□□ -0.27
SLTM-213ENST00000557950 RNF216Q9NWF9 866 aaPredicted RBP13.35□□□□□ -0.27
SLTM-213ENST00000557950 SYNJ2O15056 1496 aa13.35□□□□□ -0.27
SLTM-213ENST00000557950 GRIN2BQ13224 1484 aa13.35□□□□□ -0.27
SLTM-213ENST00000557950 NPM3O75607 178 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms