RNA–Protein interactions for RNA: ENST00000557172.5

KLC1-223, Transcript of kinesin light chain 1, humanhuman

TSL 4

Gene KLC1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLC1-223ENST00000557172 NISCHQ9Y2I1 1504 aa22.67■■□□□ 1.22
KLC1-223ENST00000557172 AEBP2Q6ZN18 517 aaPredicted RBP20.28■□□□□ 0.84
KLC1-223ENST00000557172 CHIC1Q5VXU3 224 aa20.07■□□□□ 0.8
KLC1-223ENST00000557172 CCDC180Q9P1Z9 1646 aa19.82■□□□□ 0.76
KLC1-223ENST00000557172 ABCC9O60706 1549 aa19.5■□□□□ 0.71
KLC1-223ENST00000557172 DCAF8L2P0C7V8 631 aa18.97■□□□□ 0.63
KLC1-223ENST00000557172 ZCCHC6Q5VYS8 1495 aaKnown RBP18.95■□□□□ 0.62
KLC1-223ENST00000557172 DCAF1Q9Y4B6 1507 aa18.76■□□□□ 0.59
KLC1-223ENST00000557172 RB1CC1Q8TDY2 1594 aa18.72■□□□□ 0.59
KLC1-223ENST00000557172 MYO15BQ96JP2 1530 aa18.68■□□□□ 0.58
KLC1-223ENST00000557172 NACADO15069 1562 aa18.64■□□□□ 0.58
KLC1-223ENST00000557172 UNC13AQ9UPW8 1703 aa18.43■□□□□ 0.54
KLC1-223ENST00000557172 SHROOM4Q9ULL8 1493 aa18.27■□□□□ 0.52
KLC1-223ENST00000557172 BICRAQ9NZM4 1560 aa18.2■□□□□ 0.5
KLC1-223ENST00000557172 SCRIBQ14160 1630 aa18.19■□□□□ 0.5
KLC1-223ENST00000557172 DNAJC5BQ9UF47 199 aa18.18■□□□□ 0.5
KLC1-223ENST00000557172 PABPN1Q86U42 306 aaKnown RBP eCLIP18.06■□□□□ 0.48
KLC1-223ENST00000557172 CC2D2AQ9P2K1 1620 aa17.74■□□□□ 0.43
KLC1-223ENST00000557172 EIF4G1Q04637 1599 aaKnown RBP17.72■□□□□ 0.43
KLC1-223ENST00000557172 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
KLC1-223ENST00000557172 PHF23Q9BUL5 403 aaPredicted RBP17.6■□□□□ 0.41
KLC1-223ENST00000557172 BAZ1AQ9NRL2 1556 aaPredicted RBP17.52■□□□□ 0.39
KLC1-223ENST00000557172 RSF1Q96T23 1441 aaPredicted RBP17.5■□□□□ 0.39
KLC1-223ENST00000557172 SUPT5HO00267 1087 aaKnown RBP17.5■□□□□ 0.39
KLC1-223ENST00000557172 MROH2BQ7Z745 1585 aa17.48■□□□□ 0.39
KLC1-223ENST00000557172 SMARCA4P51532 1647 aa17.43■□□□□ 0.38
KLC1-223ENST00000557172 ATAD2BQ9ULI0 1458 aa17.31■□□□□ 0.36
KLC1-223ENST00000557172 SENP3Q9H4L4 574 aaPredicted RBP17.3■□□□□ 0.36
KLC1-223ENST00000557172 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
KLC1-223ENST00000557172 NCAPD3P42695 1498 aa17.26■□□□□ 0.35
KLC1-223ENST00000557172 PEG3Q9GZU2 1588 aa17.26■□□□□ 0.35
KLC1-223ENST00000557172 WIZO95785 1651 aa17.25■□□□□ 0.35
KLC1-223ENST00000557172 BAZ1BQ9UIG0 1483 aaKnown RBP17.18■□□□□ 0.34
KLC1-223ENST00000557172 HMGXB3Q12766 1538 aa17.12■□□□□ 0.33
KLC1-223ENST00000557172 TOP2AP11388 1531 aaKnown RBP17.11■□□□□ 0.33
KLC1-223ENST00000557172 CCDC88BA6NC98 1476 aa16.99■□□□□ 0.31
KLC1-223ENST00000557172 CUX2O14529 1486 aa16.93■□□□□ 0.3
KLC1-223ENST00000557172 ERCC6Q03468 1493 aa16.84■□□□□ 0.29
KLC1-223ENST00000557172 CADPSQ9ULU8 1353 aa16.82■□□□□ 0.28
KLC1-223ENST00000557172 LAMC3Q9Y6N6 1575 aa16.81■□□□□ 0.28
KLC1-223ENST00000557172 NESP48681 1621 aa16.78■□□□□ 0.28
KLC1-223ENST00000557172 THOC2Q8NI27 1593 aaKnown RBP16.78■□□□□ 0.28
KLC1-223ENST00000557172 CFTRP13569 1480 aa16.76■□□□□ 0.27
KLC1-223ENST00000557172 KIF21AQ7Z4S6 1674 aa16.72■□□□□ 0.27
KLC1-223ENST00000557172 DNAJC5Q9H3Z4 198 aa16.71■□□□□ 0.27
KLC1-223ENST00000557172 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
KLC1-223ENST00000557172 FANCD2Q9BXW9 1451 aa16.56■□□□□ 0.24
KLC1-223ENST00000557172 WDR62O43379 1518 aa16.53■□□□□ 0.24
KLC1-223ENST00000557172 TRIM41Q8WV44 630 aa16.52■□□□□ 0.24
KLC1-223ENST00000557172 PRDM2Q13029 1718 aa16.5■□□□□ 0.23
KLC1-223ENST00000557172 MRC2Q9UBG0 1479 aa16.49■□□□□ 0.23
KLC1-223ENST00000557172 CEP164Q9UPV0 1460 aa16.48■□□□□ 0.23
KLC1-223ENST00000557172 WRNQ14191 1432 aaPredicted RBP eCLIP16.48■□□□□ 0.23
KLC1-223ENST00000557172 ABCC8Q09428 1581 aa16.44■□□□□ 0.22
KLC1-223ENST00000557172 PLPPR3Q6T4P5 718 aa16.4■□□□□ 0.22
KLC1-223ENST00000557172 CUX1P39880 1505 aa16.36■□□□□ 0.21
KLC1-223ENST00000557172 URB2Q14146 1524 aaKnown RBP16.35■□□□□ 0.21
KLC1-223ENST00000557172 TOPBP1Q92547 1522 aa16.33■□□□□ 0.2
KLC1-223ENST00000557172 SYNJ1O43426 1573 aa16.31■□□□□ 0.2
KLC1-223ENST00000557172 DNMBPQ6XZF7 1577 aa16.31■□□□□ 0.2
KLC1-223ENST00000557172 TOP2BQ02880 1626 aa16.3■□□□□ 0.2
KLC1-223ENST00000557172 FGD5Q6ZNL6 1462 aa16.25■□□□□ 0.19
KLC1-223ENST00000557172 BIVM-ERCC5R4GMW8 1640 aa16.25■□□□□ 0.19
KLC1-223ENST00000557172 SOGA1O94964 1423 aa16.25■□□□□ 0.19
KLC1-223ENST00000557172 POLA1P09884 1462 aaPredicted RBP16.22■□□□□ 0.19
KLC1-223ENST00000557172 RAD54L2Q9Y4B4 1467 aa16.18■□□□□ 0.18
KLC1-223ENST00000557172 FAM9AQ8IZU1 332 aaPredicted RBP16.16■□□□□ 0.18
KLC1-223ENST00000557172 IFT140Q96RY7 1462 aa16.14■□□□□ 0.17
KLC1-223ENST00000557172 KIF27Q86VH2 1401 aa16.12■□□□□ 0.17
KLC1-223ENST00000557172 ABCA10Q8WWZ4 1543 aa16.12■□□□□ 0.17
KLC1-223ENST00000557172 CSRNP3Q8WYN3 585 aa16.11■□□□□ 0.17
KLC1-223ENST00000557172 TDRD9Q8NDG6 1382 aaKnown RBP16.11■□□□□ 0.17
KLC1-223ENST00000557172 EEA1Q15075 1411 aa16.11■□□□□ 0.17
KLC1-223ENST00000557172 RUSC2Q8N2Y8 1516 aa16.08■□□□□ 0.16
KLC1-223ENST00000557172 EIF4G3O43432 1585 aaKnown RBP16.06■□□□□ 0.16
KLC1-223ENST00000557172 TARBP1Q13395 1621 aaKnown RBP16.05■□□□□ 0.16
KLC1-223ENST00000557172 IGF1RP08069 1367 aa16.04■□□□□ 0.16
KLC1-223ENST00000557172 AQRO60306 1485 aaKnown RBP eCLIP16.03■□□□□ 0.16
KLC1-223ENST00000557172 ZNF608Q9ULD9 1512 aaPredicted RBP16.03■□□□□ 0.16
KLC1-223ENST00000557172 GAPVD1Q14C86 1478 aa16.03■□□□□ 0.16
KLC1-223ENST00000557172 WDR97A6NE52 1622 aa15.97■□□□□ 0.15
KLC1-223ENST00000557172 OSCARQ8IYS5 282 aa15.96■□□□□ 0.15
KLC1-223ENST00000557172 CHD1O14646 1710 aa15.96■□□□□ 0.15
KLC1-223ENST00000557172 GRIN2BQ13224 1484 aa15.96■□□□□ 0.14
KLC1-223ENST00000557172 CARMIL1Q5VZK9 1371 aa15.95■□□□□ 0.14
KLC1-223ENST00000557172 RIMBP3CA6NJZ7 1639 aa15.94■□□□□ 0.14
KLC1-223ENST00000557172 RIMBP3BA6NNM3 1639 aa15.94■□□□□ 0.14
KLC1-223ENST00000557172 RIMBP3Q9UFD9 1639 aa15.94■□□□□ 0.14
KLC1-223ENST00000557172 LOC105371045A0A1W2PR82 267 aa15.94■□□□□ 0.14
KLC1-223ENST00000557172 FOXD1Q16676 465 aa15.94■□□□□ 0.14
KLC1-223ENST00000557172 ABCA5Q8WWZ7 1642 aa15.92■□□□□ 0.14
KLC1-223ENST00000557172 ERICH3Q5RHP9 1530 aa15.92■□□□□ 0.14
KLC1-223ENST00000557172 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
KLC1-223ENST00000557172 PRXQ9BXM0 1461 aa15.9■□□□□ 0.14
KLC1-223ENST00000557172 UBTFP17480 764 aaKnown RBP15.87■□□□□ 0.13
KLC1-223ENST00000557172 FHAD1B1AJZ9 1412 aa15.86■□□□□ 0.13
KLC1-223ENST00000557172 ARHGEF11O15085 1522 aa15.86■□□□□ 0.13
KLC1-223ENST00000557172 CHMP7Q8WUX9 453 aaPredicted RBP15.86■□□□□ 0.13
KLC1-223ENST00000557172 RAPGEF2Q9Y4G8 1499 aa15.85■□□□□ 0.13
KLC1-223ENST00000557172 FBLN2P98095 1184 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms