RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 NISCHQ9Y2I1 1504 aa41.91■■■■■ 4.3
PSEN1-218ENST00000556864 CCDC180Q9P1Z9 1646 aa37.22■■■■□ 3.55
PSEN1-218ENST00000556864 ABCC9O60706 1549 aa35.91■■■■□ 3.34
PSEN1-218ENST00000556864 ZCCHC6Q5VYS8 1495 aaKnown RBP35.04■■■■□ 3.2
PSEN1-218ENST00000556864 NACADO15069 1562 aa34.85■■■■□ 3.17
PSEN1-218ENST00000556864 RB1CC1Q8TDY2 1594 aa34.82■■■■□ 3.16
PSEN1-218ENST00000556864 MYO15BQ96JP2 1530 aa34.79■■■■□ 3.16
PSEN1-218ENST00000556864 DCAF1Q9Y4B6 1507 aa34.76■■■■□ 3.16
PSEN1-218ENST00000556864 DCAF8L2P0C7V8 631 aa34.71■■■■□ 3.15
PSEN1-218ENST00000556864 UNC13AQ9UPW8 1703 aa33.93■■■■□ 3.02
PSEN1-218ENST00000556864 SCRIBQ14160 1630 aa33.91■■■■□ 3.02
PSEN1-218ENST00000556864 BICRAQ9NZM4 1560 aa33.65■■■□□ 2.98
PSEN1-218ENST00000556864 SHROOM4Q9ULL8 1493 aa33.52■■■□□ 2.96
PSEN1-218ENST00000556864 PABPN1Q86U42 306 aaKnown RBP eCLIP33.51■■■□□ 2.95
PSEN1-218ENST00000556864 EIF4G1Q04637 1599 aaKnown RBP32.78■■■□□ 2.84
PSEN1-218ENST00000556864 CC2D2AQ9P2K1 1620 aa32.53■■■□□ 2.8
PSEN1-218ENST00000556864 CECR2Q9BXF3 1484 aa32.53■■■□□ 2.8
PSEN1-218ENST00000556864 BAZ1AQ9NRL2 1556 aaPredicted RBP32.53■■■□□ 2.8
PSEN1-218ENST00000556864 SMARCA4P51532 1647 aa32.48■■■□□ 2.79
PSEN1-218ENST00000556864 DNAJC5BQ9UF47 199 aa32.42■■■□□ 2.78
PSEN1-218ENST00000556864 MROH2BQ7Z745 1585 aa32.28■■■□□ 2.76
PSEN1-218ENST00000556864 SMARCA2P51531 1590 aa32.23■■■□□ 2.75
PSEN1-218ENST00000556864 PEG3Q9GZU2 1588 aa32.16■■■□□ 2.74
PSEN1-218ENST00000556864 ATAD2BQ9ULI0 1458 aa32.16■■■□□ 2.74
PSEN1-218ENST00000556864 NCAPD3P42695 1498 aa32.09■■■□□ 2.73
PSEN1-218ENST00000556864 HMGXB3Q12766 1538 aa32.06■■■□□ 2.72
PSEN1-218ENST00000556864 RSF1Q96T23 1441 aaPredicted RBP32.02■■■□□ 2.72
PSEN1-218ENST00000556864 BAZ1BQ9UIG0 1483 aaKnown RBP31.97■■■□□ 2.71
PSEN1-218ENST00000556864 WIZO95785 1651 aa31.95■■■□□ 2.7
PSEN1-218ENST00000556864 TOP2AP11388 1531 aaKnown RBP31.73■■■□□ 2.67
PSEN1-218ENST00000556864 SUPT5HO00267 1087 aaKnown RBP31.42■■■□□ 2.62
PSEN1-218ENST00000556864 LAMC3Q9Y6N6 1575 aa31.26■■■□□ 2.59
PSEN1-218ENST00000556864 CCDC88BA6NC98 1476 aa31.24■■■□□ 2.59
PSEN1-218ENST00000556864 CADPSQ9ULU8 1353 aa31.16■■■□□ 2.58
PSEN1-218ENST00000556864 NESP48681 1621 aa31.15■■■□□ 2.58
PSEN1-218ENST00000556864 CFTRP13569 1480 aa31.08■■■□□ 2.57
PSEN1-218ENST00000556864 PDS5BQ9NTI5 1447 aa31■■■□□ 2.55
PSEN1-218ENST00000556864 ERCC6Q03468 1493 aa31■■■□□ 2.55
PSEN1-218ENST00000556864 PRDM2Q13029 1718 aa30.96■■■□□ 2.55
PSEN1-218ENST00000556864 KIF21AQ7Z4S6 1674 aa30.87■■■□□ 2.53
PSEN1-218ENST00000556864 FANCD2Q9BXW9 1451 aa30.84■■■□□ 2.53
PSEN1-218ENST00000556864 CEP164Q9UPV0 1460 aa30.82■■■□□ 2.52
PSEN1-218ENST00000556864 THOC2Q8NI27 1593 aaKnown RBP30.71■■■□□ 2.51
PSEN1-218ENST00000556864 MRC2Q9UBG0 1479 aa30.68■■■□□ 2.5
PSEN1-218ENST00000556864 WDR62O43379 1518 aa30.57■■■□□ 2.49
PSEN1-218ENST00000556864 CUX2O14529 1486 aa30.56■■■□□ 2.48
PSEN1-218ENST00000556864 URB2Q14146 1524 aaKnown RBP30.48■■■□□ 2.47
PSEN1-218ENST00000556864 ABCC8Q09428 1581 aa30.46■■■□□ 2.47
PSEN1-218ENST00000556864 DNMBPQ6XZF7 1577 aa30.44■■■□□ 2.46
PSEN1-218ENST00000556864 TOPBP1Q92547 1522 aa30.39■■■□□ 2.46
PSEN1-218ENST00000556864 CUX1P39880 1505 aa30.28■■■□□ 2.44
PSEN1-218ENST00000556864 WRNQ14191 1432 aaPredicted RBP eCLIP30.25■■■□□ 2.43
PSEN1-218ENST00000556864 BIVM-ERCC5R4GMW8 1640 aa30.18■■■□□ 2.42
PSEN1-218ENST00000556864 TOP2BQ02880 1626 aa30.17■■■□□ 2.42
PSEN1-218ENST00000556864 POLA1P09884 1462 aaPredicted RBP30.15■■■□□ 2.42
PSEN1-218ENST00000556864 SYNJ1O43426 1573 aa30.15■■■□□ 2.42
PSEN1-218ENST00000556864 FGD5Q6ZNL6 1462 aa30.14■■■□□ 2.42
PSEN1-218ENST00000556864 IFT140Q96RY7 1462 aa30.14■■■□□ 2.42
PSEN1-218ENST00000556864 TARBP1Q13395 1621 aaKnown RBP30.02■■■□□ 2.4
PSEN1-218ENST00000556864 SOGA1O94964 1423 aa29.99■■■□□ 2.39
PSEN1-218ENST00000556864 RAD54L2Q9Y4B4 1467 aa29.95■■■□□ 2.39
PSEN1-218ENST00000556864 WDR97A6NE52 1622 aa29.94■■■□□ 2.38
PSEN1-218ENST00000556864 EIF4G3O43432 1585 aaKnown RBP29.89■■■□□ 2.38
PSEN1-218ENST00000556864 ABCA10Q8WWZ4 1543 aa29.88■■■□□ 2.37
PSEN1-218ENST00000556864 ZNF608Q9ULD9 1512 aaPredicted RBP29.88■■■□□ 2.37
PSEN1-218ENST00000556864 ABCA5Q8WWZ7 1642 aa29.77■■■□□ 2.36
PSEN1-218ENST00000556864 TDRD9Q8NDG6 1382 aaKnown RBP29.74■■■□□ 2.35
PSEN1-218ENST00000556864 AQRO60306 1485 aaKnown RBP eCLIP29.74■■■□□ 2.35
PSEN1-218ENST00000556864 TRIM41Q8WV44 630 aa29.7■■■□□ 2.35
PSEN1-218ENST00000556864 GAPVD1Q14C86 1478 aa29.69■■■□□ 2.34
PSEN1-218ENST00000556864 GRIN2BQ13224 1484 aa29.67■■■□□ 2.34
PSEN1-218ENST00000556864 PBRM1Q86U86 1689 aa29.66■■■□□ 2.34
PSEN1-218ENST00000556864 KIF27Q86VH2 1401 aa29.6■■■□□ 2.33
PSEN1-218ENST00000556864 MAGI1Q96QZ7 1491 aaPredicted RBP29.58■■■□□ 2.33
PSEN1-218ENST00000556864 SNAPC4Q5SXM2 1469 aa29.57■■■□□ 2.32
PSEN1-218ENST00000556864 ERICH3Q5RHP9 1530 aa29.55■■■□□ 2.32
PSEN1-218ENST00000556864 CHIC1Q5VXU3 224 aa29.52■■■□□ 2.32
PSEN1-218ENST00000556864 ADAMTS12P58397 1594 aa29.47■■■□□ 2.31
PSEN1-218ENST00000556864 SYNJ2O15056 1496 aa29.43■■■□□ 2.3
PSEN1-218ENST00000556864 CUL7Q14999 1698 aa29.41■■■□□ 2.3
PSEN1-218ENST00000556864 CHD1O14646 1710 aa29.4■■■□□ 2.3
PSEN1-218ENST00000556864 FHAD1B1AJZ9 1412 aa29.38■■■□□ 2.29
PSEN1-218ENST00000556864 EEA1Q15075 1411 aa29.34■■■□□ 2.29
PSEN1-218ENST00000556864 IGF1RP08069 1367 aa29.32■■■□□ 2.28
PSEN1-218ENST00000556864 RUSC2Q8N2Y8 1516 aa29.3■■■□□ 2.28
PSEN1-218ENST00000556864 FBLN2P98095 1184 aa29.3■■■□□ 2.28
PSEN1-218ENST00000556864 CHMP7Q8WUX9 453 aaPredicted RBP29.3■■■□□ 2.28
PSEN1-218ENST00000556864 GRIN2AQ12879 1464 aa29.28■■■□□ 2.28
PSEN1-218ENST00000556864 OSCARQ8IYS5 282 aa29.22■■■□□ 2.27
PSEN1-218ENST00000556864 CARMIL1Q5VZK9 1371 aa29.2■■■□□ 2.26
PSEN1-218ENST00000556864 RAPGEF2Q9Y4G8 1499 aa29.13■■■□□ 2.25
PSEN1-218ENST00000556864 NUP160Q12769 1436 aa29.12■■■□□ 2.25
PSEN1-218ENST00000556864 CLASP1Q7Z460 1538 aa29.11■■■□□ 2.25
PSEN1-218ENST00000556864 CEP170Q5SW79 1584 aa29.1■■■□□ 2.25
PSEN1-218ENST00000556864 PRXQ9BXM0 1461 aa29.09■■■□□ 2.25
PSEN1-218ENST00000556864 CSRNP3Q8WYN3 585 aa29.08■■■□□ 2.25
PSEN1-218ENST00000556864 FAM9AQ8IZU1 332 aaPredicted RBP29.02■■■□□ 2.24
PSEN1-218ENST00000556864 KIF21BO75037 1637 aa29■■■□□ 2.23
PSEN1-218ENST00000556864 DNAJC5Q9H3Z4 198 aa28.99■■■□□ 2.23
PSEN1-218ENST00000556864 KIAA0586Q9BVV6 1533 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms