RNA–Protein interactions for RNA: ENST00000556641.5

CCNK-207, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 747 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-207ENST00000556641 AEBP2Q6ZN18 517 aaPredicted RBP27.26■■□□□ 1.95
CCNK-207ENST00000556641 CHIC1Q5VXU3 224 aa25.7■■□□□ 1.7
CCNK-207ENST00000556641 NISCHQ9Y2I1 1504 aa24.1■■□□□ 1.45
CCNK-207ENST00000556641 SENP3Q9H4L4 574 aaPredicted RBP23.46■■□□□ 1.35
CCNK-207ENST00000556641 PHF23Q9BUL5 403 aaPredicted RBP23.03■■□□□ 1.28
CCNK-207ENST00000556641 FOXD1Q16676 465 aa21.8■■□□□ 1.08
CCNK-207ENST00000556641 CCDC180Q9P1Z9 1646 aa21.38■■□□□ 1.01
CCNK-207ENST00000556641 ABCC9O60706 1549 aa21■□□□□ 0.95
CCNK-207ENST00000556641 MSH5O43196 834 aa20.65■□□□□ 0.9
CCNK-207ENST00000556641 POTEDQ86YR6 584 aa20.54■□□□□ 0.88
CCNK-207ENST00000556641 PLPPR3Q6T4P5 718 aa20.44■□□□□ 0.86
CCNK-207ENST00000556641 DCAF8L2P0C7V8 631 aa20.31■□□□□ 0.84
CCNK-207ENST00000556641 PIAS4Q8N2W9 510 aaPredicted RBP20.31■□□□□ 0.84
CCNK-207ENST00000556641 RB1CC1Q8TDY2 1594 aa20.17■□□□□ 0.82
CCNK-207ENST00000556641 NACADO15069 1562 aa20.14■□□□□ 0.81
CCNK-207ENST00000556641 PPP6R1Q9UPN7 881 aa20.09■□□□□ 0.81
CCNK-207ENST00000556641 ZCCHC6Q5VYS8 1495 aaKnown RBP20.06■□□□□ 0.8
CCNK-207ENST00000556641 ADRA2BP18089 450 aa20.01■□□□□ 0.79
CCNK-207ENST00000556641 MYO15BQ96JP2 1530 aa19.99■□□□□ 0.79
CCNK-207ENST00000556641 DCAF1Q9Y4B6 1507 aa19.91■□□□□ 0.78
CCNK-207ENST00000556641 PABPN1Q86U42 306 aaKnown RBP eCLIP19.67■□□□□ 0.74
CCNK-207ENST00000556641 UNC13AQ9UPW8 1703 aa19.64■□□□□ 0.73
CCNK-207ENST00000556641 SCRIBQ14160 1630 aa19.58■□□□□ 0.72
CCNK-207ENST00000556641 BICRAQ9NZM4 1560 aa19.51■□□□□ 0.71
CCNK-207ENST00000556641 SHROOM4Q9ULL8 1493 aa19.32■□□□□ 0.68
CCNK-207ENST00000556641 DNAJC5BQ9UF47 199 aa19.26■□□□□ 0.67
CCNK-207ENST00000556641 EIF4G1Q04637 1599 aaKnown RBP19.03■□□□□ 0.64
CCNK-207ENST00000556641 CC2D2AQ9P2K1 1620 aa18.96■□□□□ 0.63
CCNK-207ENST00000556641 CECR2Q9BXF3 1484 aa18.86■□□□□ 0.61
CCNK-207ENST00000556641 BAZ1AQ9NRL2 1556 aaPredicted RBP18.69■□□□□ 0.58
CCNK-207ENST00000556641 SMARCA4P51532 1647 aa18.69■□□□□ 0.58
CCNK-207ENST00000556641 ATAD2BQ9ULI0 1458 aa18.61■□□□□ 0.57
CCNK-207ENST00000556641 SMARCA2P51531 1590 aa18.59■□□□□ 0.57
CCNK-207ENST00000556641 NCAPD3P42695 1498 aa18.58■□□□□ 0.57
CCNK-207ENST00000556641 MROH2BQ7Z745 1585 aa18.58■□□□□ 0.56
CCNK-207ENST00000556641 DMRT2Q9Y5R5 561 aa18.52■□□□□ 0.56
CCNK-207ENST00000556641 SCAF1Q9H7N4 1312 aaKnown RBP18.51■□□□□ 0.55
CCNK-207ENST00000556641 BAZ1BQ9UIG0 1483 aaKnown RBP18.49■□□□□ 0.55
CCNK-207ENST00000556641 HMGXB3Q12766 1538 aa18.48■□□□□ 0.55
CCNK-207ENST00000556641 PEG3Q9GZU2 1588 aa18.47■□□□□ 0.55
CCNK-207ENST00000556641 MAPK8IP2Q13387 824 aaPredicted RBP18.44■□□□□ 0.54
CCNK-207ENST00000556641 RSF1Q96T23 1441 aaPredicted RBP18.39■□□□□ 0.53
CCNK-207ENST00000556641 WIZO95785 1651 aa18.38■□□□□ 0.53
CCNK-207ENST00000556641 TOP2AP11388 1531 aaKnown RBP18.18■□□□□ 0.5
CCNK-207ENST00000556641 NESP48681 1621 aa18.16■□□□□ 0.5
CCNK-207ENST00000556641 ERCC6Q03468 1493 aa18.14■□□□□ 0.49
CCNK-207ENST00000556641 LAMC3Q9Y6N6 1575 aa18.09■□□□□ 0.49
CCNK-207ENST00000556641 CADPSQ9ULU8 1353 aa18.08■□□□□ 0.49
CCNK-207ENST00000556641 SUPT5HO00267 1087 aaKnown RBP18.05■□□□□ 0.48
CCNK-207ENST00000556641 PDS5BQ9NTI5 1447 aa18.02■□□□□ 0.48
CCNK-207ENST00000556641 CCDC88BA6NC98 1476 aa18■□□□□ 0.47
CCNK-207ENST00000556641 CFTRP13569 1480 aa17.95■□□□□ 0.46
CCNK-207ENST00000556641 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
CCNK-207ENST00000556641 CUX2O14529 1486 aa17.88■□□□□ 0.45
CCNK-207ENST00000556641 FANCD2Q9BXW9 1451 aa17.88■□□□□ 0.45
CCNK-207ENST00000556641 CEP164Q9UPV0 1460 aa17.85■□□□□ 0.45
CCNK-207ENST00000556641 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.44
CCNK-207ENST00000556641 CACNB1Q02641 598 aaPredicted RBP17.82■□□□□ 0.44
CCNK-207ENST00000556641 PPP4R3CPQ6ZMV5 832 aa17.82■□□□□ 0.44
CCNK-207ENST00000556641 MRC2Q9UBG0 1479 aa17.81■□□□□ 0.44
CCNK-207ENST00000556641 PRDM2Q13029 1718 aa17.75■□□□□ 0.43
CCNK-207ENST00000556641 HOXD11P31277 338 aaPredicted RBP17.75■□□□□ 0.43
CCNK-207ENST00000556641 WDR62O43379 1518 aa17.72■□□□□ 0.43
CCNK-207ENST00000556641 DCAF8L1A6NGE4 600 aa17.69■□□□□ 0.42
CCNK-207ENST00000556641 URB2Q14146 1524 aaKnown RBP17.67■□□□□ 0.42
CCNK-207ENST00000556641 CNKSR2Q8WXI2 1034 aa17.62■□□□□ 0.41
CCNK-207ENST00000556641 ABCC8Q09428 1581 aa17.59■□□□□ 0.41
CCNK-207ENST00000556641 TOPBP1Q92547 1522 aa17.57■□□□□ 0.4
CCNK-207ENST00000556641 RNF216Q9NWF9 866 aaPredicted RBP17.54■□□□□ 0.4
CCNK-207ENST00000556641 DNMBPQ6XZF7 1577 aa17.53■□□□□ 0.4
CCNK-207ENST00000556641 RNF39Q9H2S5 420 aa17.53■□□□□ 0.4
CCNK-207ENST00000556641 IFT140Q96RY7 1462 aa17.48■□□□□ 0.39
CCNK-207ENST00000556641 CUX1P39880 1505 aa17.43■□□□□ 0.38
CCNK-207ENST00000556641 POLA1P09884 1462 aaPredicted RBP17.42■□□□□ 0.38
CCNK-207ENST00000556641 SOGA1O94964 1423 aa17.39■□□□□ 0.38
CCNK-207ENST00000556641 FGD5Q6ZNL6 1462 aa17.39■□□□□ 0.37
CCNK-207ENST00000556641 ZNF608Q9ULD9 1512 aaPredicted RBP17.38■□□□□ 0.37
CCNK-207ENST00000556641 WRNQ14191 1432 aaPredicted RBP eCLIP17.37■□□□□ 0.37
CCNK-207ENST00000556641 RAD54L2Q9Y4B4 1467 aa17.37■□□□□ 0.37
CCNK-207ENST00000556641 DNAJC5Q9H3Z4 198 aa17.36■□□□□ 0.37
CCNK-207ENST00000556641 TARBP1Q13395 1621 aaKnown RBP17.34■□□□□ 0.37
CCNK-207ENST00000556641 C1QBPQ07021 282 aaKnown RBP17.32■□□□□ 0.36
CCNK-207ENST00000556641 AQRO60306 1485 aaKnown RBP eCLIP17.31■□□□□ 0.363e-6■■■■□ 24.7
CCNK-207ENST00000556641 TDRD9Q8NDG6 1382 aaKnown RBP17.3■□□□□ 0.36
CCNK-207ENST00000556641 EIF4G3O43432 1585 aaKnown RBP17.29■□□□□ 0.36
CCNK-207ENST00000556641 TOP2BQ02880 1626 aa17.28■□□□□ 0.36
CCNK-207ENST00000556641 SYNJ1O43426 1573 aa17.27■□□□□ 0.35
CCNK-207ENST00000556641 BIVM-ERCC5R4GMW8 1640 aa17.25■□□□□ 0.35
CCNK-207ENST00000556641 OSCARQ8IYS5 282 aa17.22■□□□□ 0.35
CCNK-207ENST00000556641 ABCA10Q8WWZ4 1543 aa17.21■□□□□ 0.34
CCNK-207ENST00000556641 FBLN2P98095 1184 aa17.2■□□□□ 0.34
CCNK-207ENST00000556641 WDR97A6NE52 1622 aa17.2■□□□□ 0.34
CCNK-207ENST00000556641 GAPVD1Q14C86 1478 aa17.18■□□□□ 0.34
CCNK-207ENST00000556641 GRIN2BQ13224 1484 aa17.17■□□□□ 0.34
CCNK-207ENST00000556641 NCBP3Q53F19 620 aaKnown RBP17.15■□□□□ 0.34
CCNK-207ENST00000556641 SNAPC4Q5SXM2 1469 aa17.14■□□□□ 0.33
CCNK-207ENST00000556641 CHMP7Q8WUX9 453 aaPredicted RBP17.12■□□□□ 0.33
CCNK-207ENST00000556641 MAGI1Q96QZ7 1491 aaPredicted RBP17.11■□□□□ 0.33
CCNK-207ENST00000556641 ABCA5Q8WWZ7 1642 aa17.1■□□□□ 0.33
CCNK-207ENST00000556641 PBRM1Q86U86 1689 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms