RNA–Protein interactions for RNA: ENST00000556572.1

NID2-205, Transcript of nidogen 2, humanhuman

TSL 2

Gene NID2, Length 1,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID2-205ENST00000556572 NISCHQ9Y2I1 1504 aa26.81■■□□□ 1.88
NID2-205ENST00000556572 CCDC180Q9P1Z9 1646 aa23.38■■□□□ 1.33
NID2-205ENST00000556572 ZCCHC6Q5VYS8 1495 aaKnown RBP22.5■■□□□ 1.19
NID2-205ENST00000556572 DCAF8L2P0C7V8 631 aa22.21■■□□□ 1.15
NID2-205ENST00000556572 ABCC9O60706 1549 aa22.17■■□□□ 1.14
NID2-205ENST00000556572 DCAF1Q9Y4B6 1507 aa22.15■■□□□ 1.14
NID2-205ENST00000556572 MYO15BQ96JP2 1530 aa21.89■■□□□ 1.1
NID2-205ENST00000556572 SHROOM4Q9ULL8 1493 aa21.88■■□□□ 1.09
NID2-205ENST00000556572 NACADO15069 1562 aa21.79■■□□□ 1.08
NID2-205ENST00000556572 RB1CC1Q8TDY2 1594 aa21.61■■□□□ 1.05
NID2-205ENST00000556572 SCRIBQ14160 1630 aa21.51■■□□□ 1.03
NID2-205ENST00000556572 UNC13AQ9UPW8 1703 aa21.19■□□□□ 0.98
NID2-205ENST00000556572 SUPT5HO00267 1087 aaKnown RBP21.05■□□□□ 0.96
NID2-205ENST00000556572 BICRAQ9NZM4 1560 aa20.97■□□□□ 0.95
NID2-205ENST00000556572 PABPN1Q86U42 306 aaKnown RBP eCLIP20.92■□□□□ 0.94
NID2-205ENST00000556572 CECR2Q9BXF3 1484 aa20.85■□□□□ 0.93
NID2-205ENST00000556572 RSF1Q96T23 1441 aaPredicted RBP20.79■□□□□ 0.92
NID2-205ENST00000556572 MROH2BQ7Z745 1585 aa20.72■□□□□ 0.91
NID2-205ENST00000556572 BAZ1AQ9NRL2 1556 aaPredicted RBP20.7■□□□□ 0.9
NID2-205ENST00000556572 SMARCA4P51532 1647 aa20.61■□□□□ 0.89
NID2-205ENST00000556572 WIZO95785 1651 aa20.56■□□□□ 0.88
NID2-205ENST00000556572 PEG3Q9GZU2 1588 aa20.35■□□□□ 0.85
NID2-205ENST00000556572 EIF4G1Q04637 1599 aaKnown RBP20.33■□□□□ 0.85
NID2-205ENST00000556572 CHIC1Q5VXU3 224 aa20.32■□□□□ 0.84
NID2-205ENST00000556572 TOP2AP11388 1531 aaKnown RBP20.32■□□□□ 0.84
NID2-205ENST00000556572 ATAD2BQ9ULI0 1458 aa20.29■□□□□ 0.84
NID2-205ENST00000556572 SMARCA2P51531 1590 aa20.27■□□□□ 0.83
NID2-205ENST00000556572 BAZ1BQ9UIG0 1483 aaKnown RBP20.17■□□□□ 0.82
NID2-205ENST00000556572 CCDC88BA6NC98 1476 aa20.13■□□□□ 0.81
NID2-205ENST00000556572 NCAPD3P42695 1498 aa20.12■□□□□ 0.81
NID2-205ENST00000556572 HMGXB3Q12766 1538 aa20.07■□□□□ 0.8
NID2-205ENST00000556572 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
NID2-205ENST00000556572 HRCP23327 699 aa19.9■□□□□ 0.78
NID2-205ENST00000556572 TRIM41Q8WV44 630 aa19.79■□□□□ 0.76
NID2-205ENST00000556572 PCGF6Q9BYE7 350 aa19.76■□□□□ 0.75
NID2-205ENST00000556572 ABCC8Q09428 1581 aa19.7■□□□□ 0.74
NID2-205ENST00000556572 CFTRP13569 1480 aa19.66■□□□□ 0.74
NID2-205ENST00000556572 LOC105371045A0A1W2PR82 267 aa19.64■□□□□ 0.74
NID2-205ENST00000556572 CADPSQ9ULU8 1353 aa19.61■□□□□ 0.73
NID2-205ENST00000556572 DNAJC5BQ9UF47 199 aa19.6■□□□□ 0.73
NID2-205ENST00000556572 WRNQ14191 1432 aaPredicted RBP eCLIP19.57■□□□□ 0.72
NID2-205ENST00000556572 PRDM2Q13029 1718 aa19.55■□□□□ 0.72
NID2-205ENST00000556572 SYNJ1O43426 1573 aa19.49■□□□□ 0.71
NID2-205ENST00000556572 TRIM26Q12899 539 aaPredicted RBP19.47■□□□□ 0.71
NID2-205ENST00000556572 NESP48681 1621 aa19.45■□□□□ 0.7
NID2-205ENST00000556572 FAM9AQ8IZU1 332 aaPredicted RBP19.44■□□□□ 0.7
NID2-205ENST00000556572 LAMC3Q9Y6N6 1575 aa19.44■□□□□ 0.7
NID2-205ENST00000556572 TOP2BQ02880 1626 aa19.41■□□□□ 0.7
NID2-205ENST00000556572 FANCD2Q9BXW9 1451 aa19.39■□□□□ 0.69
NID2-205ENST00000556572 BIVM-ERCC5R4GMW8 1640 aa19.38■□□□□ 0.69
NID2-205ENST00000556572 CUX1P39880 1505 aa19.37■□□□□ 0.69
NID2-205ENST00000556572 SOGA1O94964 1423 aa19.33■□□□□ 0.68
NID2-205ENST00000556572 PPARGC1BQ86YN6 1023 aaKnown RBP19.32■□□□□ 0.68
NID2-205ENST00000556572 PDS5BQ9NTI5 1447 aa19.3■□□□□ 0.68
NID2-205ENST00000556572 EEA1Q15075 1411 aa19.26■□□□□ 0.67
NID2-205ENST00000556572 CEP164Q9UPV0 1460 aa19.26■□□□□ 0.67
NID2-205ENST00000556572 RUSC2Q8N2Y8 1516 aa19.26■□□□□ 0.67
NID2-205ENST00000556572 KIF21AQ7Z4S6 1674 aa19.21■□□□□ 0.67
NID2-205ENST00000556572 DNMBPQ6XZF7 1577 aa19.2■□□□□ 0.66
NID2-205ENST00000556572 CSRNP3Q8WYN3 585 aa19.2■□□□□ 0.66
NID2-205ENST00000556572 ZEB1P37275 1124 aaPredicted RBP19.18■□□□□ 0.66
NID2-205ENST00000556572 EHMT2Q96KQ7 1210 aa19.17■□□□□ 0.66
NID2-205ENST00000556572 TOPBP1Q92547 1522 aa19.17■□□□□ 0.66
NID2-205ENST00000556572 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
NID2-205ENST00000556572 URB2Q14146 1524 aaKnown RBP19.14■□□□□ 0.66
NID2-205ENST00000556572 KIF27Q86VH2 1401 aa19.08■□□□□ 0.64
NID2-205ENST00000556572 POLA1P09884 1462 aaPredicted RBP19.07■□□□□ 0.64
NID2-205ENST00000556572 CUX2O14529 1486 aa19.04■□□□□ 0.64
NID2-205ENST00000556572 MRC2Q9UBG0 1479 aa19.03■□□□□ 0.64
NID2-205ENST00000556572 RAD54L2Q9Y4B4 1467 aa19.03■□□□□ 0.64
NID2-205ENST00000556572 KIF21BO75037 1637 aa19.01■□□□□ 0.63
NID2-205ENST00000556572 ERCC6Q03468 1493 aa19■□□□□ 0.63
NID2-205ENST00000556572 GOLGA3Q08378 1498 aa19■□□□□ 0.63
NID2-205ENST00000556572 ABCA10Q8WWZ4 1543 aa18.99■□□□□ 0.63
NID2-205ENST00000556572 UBTFP17480 764 aaKnown RBP18.96■□□□□ 0.63
NID2-205ENST00000556572 TNIKQ9UKE5 1360 aa18.95■□□□□ 0.62
NID2-205ENST00000556572 PRXQ9BXM0 1461 aa18.94■□□□□ 0.62
NID2-205ENST00000556572 WDR62O43379 1518 aa18.93■□□□□ 0.62
NID2-205ENST00000556572 RAPGEF2Q9Y4G8 1499 aa18.93■□□□□ 0.62
NID2-205ENST00000556572 IGF1RP08069 1367 aa18.93■□□□□ 0.62
NID2-205ENST00000556572 WDR97A6NE52 1622 aa18.92■□□□□ 0.62
NID2-205ENST00000556572 ERICH3Q5RHP9 1530 aa18.89■□□□□ 0.61
NID2-205ENST00000556572 TARBP1Q13395 1621 aaKnown RBP18.89■□□□□ 0.61
NID2-205ENST00000556572 THOC2Q8NI27 1593 aaKnown RBP18.88■□□□□ 0.61
NID2-205ENST00000556572 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
NID2-205ENST00000556572 CEP162Q5TB80 1403 aa18.84■□□□□ 0.61
NID2-205ENST00000556572 CARMIL1Q5VZK9 1371 aa18.83■□□□□ 0.61
NID2-205ENST00000556572 ABCA5Q8WWZ7 1642 aa18.83■□□□□ 0.61
NID2-205ENST00000556572 GAPVD1Q14C86 1478 aa18.81■□□□□ 0.6
NID2-205ENST00000556572 IFT140Q96RY7 1462 aa18.8■□□□□ 0.6
NID2-205ENST00000556572 CUL7Q14999 1698 aa18.76■□□□□ 0.59
NID2-205ENST00000556572 AQRO60306 1485 aaKnown RBP eCLIP18.74■□□□□ 0.59
NID2-205ENST00000556572 ZNF608Q9ULD9 1512 aaPredicted RBP18.71■□□□□ 0.59
NID2-205ENST00000556572 CLIP1P30622 1438 aa18.71■□□□□ 0.59
NID2-205ENST00000556572 PBRM1Q86U86 1689 aa18.7■□□□□ 0.58
NID2-205ENST00000556572 RANGAP1P46060 587 aaPredicted RBP18.67■□□□□ 0.58
NID2-205ENST00000556572 GRIN2BQ13224 1484 aa18.66■□□□□ 0.58
NID2-205ENST00000556572 EIF4G3O43432 1585 aaKnown RBP18.64■□□□□ 0.57
NID2-205ENST00000556572 FHAD1B1AJZ9 1412 aa18.61■□□□□ 0.57
NID2-205ENST00000556572 ADAMTS12P58397 1594 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms