RNA–Protein interactions for RNA: ENST00000556438.6

LGALS3-207, Transcript of galectin 3, humanhuman

TSL 1 (best)

Gene LGALS3, Length 1,734 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGALS3-207ENST00000556438 NISCHQ9Y2I1 1504 aa25.79■■□□□ 1.72
LGALS3-207ENST00000556438 CCDC180Q9P1Z9 1646 aa22.75■■□□□ 1.23
LGALS3-207ENST00000556438 ABCC9O60706 1549 aa22.36■■□□□ 1.17
LGALS3-207ENST00000556438 DCAF8L2P0C7V8 631 aa21.74■■□□□ 1.07
LGALS3-207ENST00000556438 ZCCHC6Q5VYS8 1495 aaKnown RBP21.51■■□□□ 1.03
LGALS3-207ENST00000556438 RB1CC1Q8TDY2 1594 aa21.42■■□□□ 1.02
LGALS3-207ENST00000556438 NACADO15069 1562 aa21.4■■□□□ 1.02
LGALS3-207ENST00000556438 MYO15BQ96JP2 1530 aa21.24■□□□□ 0.99
LGALS3-207ENST00000556438 DCAF1Q9Y4B6 1507 aa21.23■□□□□ 0.99
LGALS3-207ENST00000556438 PABPN1Q86U42 306 aaKnown RBP eCLIP20.99■□□□□ 0.95
LGALS3-207ENST00000556438 SCRIBQ14160 1630 aa20.96■□□□□ 0.95
LGALS3-207ENST00000556438 UNC13AQ9UPW8 1703 aa20.95■□□□□ 0.94
LGALS3-207ENST00000556438 BICRAQ9NZM4 1560 aa20.81■□□□□ 0.92
LGALS3-207ENST00000556438 SHROOM4Q9ULL8 1493 aa20.7■□□□□ 0.9
LGALS3-207ENST00000556438 DNAJC5BQ9UF47 199 aa20.45■□□□□ 0.86
LGALS3-207ENST00000556438 EIF4G1Q04637 1599 aaKnown RBP20.25■□□□□ 0.83
LGALS3-207ENST00000556438 CECR2Q9BXF3 1484 aa20.18■□□□□ 0.82
LGALS3-207ENST00000556438 CC2D2AQ9P2K1 1620 aa20.15■□□□□ 0.82
LGALS3-207ENST00000556438 SMARCA4P51532 1647 aa19.98■□□□□ 0.79
LGALS3-207ENST00000556438 BAZ1AQ9NRL2 1556 aaPredicted RBP19.95■□□□□ 0.78
LGALS3-207ENST00000556438 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
LGALS3-207ENST00000556438 ATAD2BQ9ULI0 1458 aa19.86■□□□□ 0.77
LGALS3-207ENST00000556438 SMARCA2P51531 1590 aa19.78■□□□□ 0.76
LGALS3-207ENST00000556438 NCAPD3P42695 1498 aa19.78■□□□□ 0.76
LGALS3-207ENST00000556438 RSF1Q96T23 1441 aaPredicted RBP19.76■□□□□ 0.75
LGALS3-207ENST00000556438 WIZO95785 1651 aa19.73■□□□□ 0.75
LGALS3-207ENST00000556438 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
LGALS3-207ENST00000556438 PEG3Q9GZU2 1588 aa19.7■□□□□ 0.74
LGALS3-207ENST00000556438 HMGXB3Q12766 1538 aa19.66■□□□□ 0.74
LGALS3-207ENST00000556438 SUPT5HO00267 1087 aaKnown RBP19.54■□□□□ 0.72
LGALS3-207ENST00000556438 TOP2AP11388 1531 aaKnown RBP19.47■□□□□ 0.71
LGALS3-207ENST00000556438 NESP48681 1621 aa19.4■□□□□ 0.7
LGALS3-207ENST00000556438 CCDC88BA6NC98 1476 aa19.3■□□□□ 0.68
LGALS3-207ENST00000556438 CADPSQ9ULU8 1353 aa19.26■□□□□ 0.67
LGALS3-207ENST00000556438 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
LGALS3-207ENST00000556438 LAMC3Q9Y6N6 1575 aa19.21■□□□□ 0.67
LGALS3-207ENST00000556438 CFTRP13569 1480 aa19.15■□□□□ 0.66
LGALS3-207ENST00000556438 PDS5BQ9NTI5 1447 aa19.13■□□□□ 0.65
LGALS3-207ENST00000556438 KIF21AQ7Z4S6 1674 aa19.08■□□□□ 0.65
LGALS3-207ENST00000556438 FANCD2Q9BXW9 1451 aa19.06■□□□□ 0.64
LGALS3-207ENST00000556438 CEP164Q9UPV0 1460 aa19■□□□□ 0.63
LGALS3-207ENST00000556438 THOC2Q8NI27 1593 aaKnown RBP18.96■□□□□ 0.63
LGALS3-207ENST00000556438 MRC2Q9UBG0 1479 aa18.92■□□□□ 0.62
LGALS3-207ENST00000556438 PRDM2Q13029 1718 aa18.91■□□□□ 0.62
LGALS3-207ENST00000556438 URB2Q14146 1524 aaKnown RBP18.87■□□□□ 0.61
LGALS3-207ENST00000556438 CUX2O14529 1486 aa18.85■□□□□ 0.61
LGALS3-207ENST00000556438 WDR62O43379 1518 aa18.83■□□□□ 0.6
LGALS3-207ENST00000556438 TOPBP1Q92547 1522 aa18.76■□□□□ 0.59
LGALS3-207ENST00000556438 DNMBPQ6XZF7 1577 aa18.7■□□□□ 0.58
LGALS3-207ENST00000556438 ABCC8Q09428 1581 aa18.7■□□□□ 0.58
LGALS3-207ENST00000556438 CUX1P39880 1505 aa18.69■□□□□ 0.58
LGALS3-207ENST00000556438 POLA1P09884 1462 aaPredicted RBP18.62■□□□□ 0.57
LGALS3-207ENST00000556438 WRNQ14191 1432 aaPredicted RBP eCLIP18.62■□□□□ 0.57
LGALS3-207ENST00000556438 FGD5Q6ZNL6 1462 aa18.61■□□□□ 0.57
LGALS3-207ENST00000556438 RAD54L2Q9Y4B4 1467 aa18.6■□□□□ 0.57
LGALS3-207ENST00000556438 SYNJ1O43426 1573 aa18.58■□□□□ 0.56
LGALS3-207ENST00000556438 ZNF608Q9ULD9 1512 aaPredicted RBP18.58■□□□□ 0.56
LGALS3-207ENST00000556438 IFT140Q96RY7 1462 aa18.56■□□□□ 0.56
LGALS3-207ENST00000556438 SOGA1O94964 1423 aa18.56■□□□□ 0.56
LGALS3-207ENST00000556438 TARBP1Q13395 1621 aaKnown RBP18.51■□□□□ 0.55
LGALS3-207ENST00000556438 TOP2BQ02880 1626 aa18.51■□□□□ 0.55
LGALS3-207ENST00000556438 TDRD9Q8NDG6 1382 aaKnown RBP18.51■□□□□ 0.55
LGALS3-207ENST00000556438 AQRO60306 1485 aaKnown RBP eCLIP18.5■□□□□ 0.55
LGALS3-207ENST00000556438 BIVM-ERCC5R4GMW8 1640 aa18.48■□□□□ 0.55
LGALS3-207ENST00000556438 EIF4G3O43432 1585 aaKnown RBP18.44■□□□□ 0.54
LGALS3-207ENST00000556438 ABCA10Q8WWZ4 1543 aa18.37■□□□□ 0.53
LGALS3-207ENST00000556438 TRIM41Q8WV44 630 aa18.36■□□□□ 0.53
LGALS3-207ENST00000556438 WDR97A6NE52 1622 aa18.35■□□□□ 0.53
LGALS3-207ENST00000556438 GAPVD1Q14C86 1478 aa18.33■□□□□ 0.52
LGALS3-207ENST00000556438 FBLN2P98095 1184 aa18.32■□□□□ 0.52
LGALS3-207ENST00000556438 SNAPC4Q5SXM2 1469 aa18.29■□□□□ 0.52
LGALS3-207ENST00000556438 ABCA5Q8WWZ7 1642 aa18.28■□□□□ 0.52
LGALS3-207ENST00000556438 GRIN2BQ13224 1484 aa18.28■□□□□ 0.52
LGALS3-207ENST00000556438 PBRM1Q86U86 1689 aa18.23■□□□□ 0.51
LGALS3-207ENST00000556438 CHIC1Q5VXU3 224 aa18.23■□□□□ 0.51
LGALS3-207ENST00000556438 CHMP7Q8WUX9 453 aaPredicted RBP18.2■□□□□ 0.5
LGALS3-207ENST00000556438 DNAJC5Q9H3Z4 198 aa18.2■□□□□ 0.5
LGALS3-207ENST00000556438 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
LGALS3-207ENST00000556438 KIF27Q86VH2 1401 aa18.19■□□□□ 0.5
LGALS3-207ENST00000556438 RUSC2Q8N2Y8 1516 aa18.19■□□□□ 0.5
LGALS3-207ENST00000556438 MAGI1Q96QZ7 1491 aaPredicted RBP18.18■□□□□ 0.5
LGALS3-207ENST00000556438 CHD1O14646 1710 aa18.17■□□□□ 0.5
LGALS3-207ENST00000556438 IGF1RP08069 1367 aa18.14■□□□□ 0.49
LGALS3-207ENST00000556438 SYNJ2O15056 1496 aa18.14■□□□□ 0.49
LGALS3-207ENST00000556438 ERICH3Q5RHP9 1530 aa18.13■□□□□ 0.49
LGALS3-207ENST00000556438 ADAMTS12P58397 1594 aa18.11■□□□□ 0.49
LGALS3-207ENST00000556438 FAM9AQ8IZU1 332 aaPredicted RBP18.1■□□□□ 0.49
LGALS3-207ENST00000556438 FHAD1B1AJZ9 1412 aa18.09■□□□□ 0.49
LGALS3-207ENST00000556438 GRIN2AQ12879 1464 aa18.06■□□□□ 0.48
LGALS3-207ENST00000556438 CARMIL1Q5VZK9 1371 aa18.03■□□□□ 0.48
LGALS3-207ENST00000556438 CEP170Q5SW79 1584 aa17.98■□□□□ 0.47
LGALS3-207ENST00000556438 CUL7Q14999 1698 aa17.98■□□□□ 0.47
LGALS3-207ENST00000556438 CSRNP3Q8WYN3 585 aa17.95■□□□□ 0.46
LGALS3-207ENST00000556438 EHMT2Q96KQ7 1210 aa17.95■□□□□ 0.46
LGALS3-207ENST00000556438 NUP160Q12769 1436 aa17.95■□□□□ 0.46
LGALS3-207ENST00000556438 CLASP1Q7Z460 1538 aa17.95■□□□□ 0.46
LGALS3-207ENST00000556438 RAPGEF2Q9Y4G8 1499 aa17.92■□□□□ 0.46
LGALS3-207ENST00000556438 ARHGEF11O15085 1522 aa17.89■□□□□ 0.45
LGALS3-207ENST00000556438 PRXQ9BXM0 1461 aa17.88■□□□□ 0.45
LGALS3-207ENST00000556438 EEA1Q15075 1411 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms