RNA–Protein interactions for RNA: ENST00000555623.1

AC007956.1-201, humanhuman

BASIC

Gene AC007956.1, Length 542 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007956.1-201ENST00000555623 AEBP2Q6ZN18 517 aaPredicted RBP16.65■□□□□ 0.26
AC007956.1-201ENST00000555623 CHIC1Q5VXU3 224 aa15.65■□□□□ 0.1
AC007956.1-201ENST00000555623 NISCHQ9Y2I1 1504 aa14.96□□□□□ -0.02
AC007956.1-201ENST00000555623 SENP3Q9H4L4 574 aaPredicted RBP14.17□□□□□ -0.14
AC007956.1-201ENST00000555623 PHF23Q9BUL5 403 aaPredicted RBP13.99□□□□□ -0.17
AC007956.1-201ENST00000555623 POTEDQ86YR6 584 aa13.51□□□□□ -0.25
AC007956.1-201ENST00000555623 CCDC180Q9P1Z9 1646 aa13.39□□□□□ -0.27
AC007956.1-201ENST00000555623 FOXD1Q16676 465 aa13.26□□□□□ -0.29
AC007956.1-201ENST00000555623 ABCC9O60706 1549 aa13.25□□□□□ -0.29
AC007956.1-201ENST00000555623 RB1CC1Q8TDY2 1594 aa12.71□□□□□ -0.37
AC007956.1-201ENST00000555623 NACADO15069 1562 aa12.66□□□□□ -0.38
AC007956.1-201ENST00000555623 DCAF8L2P0C7V8 631 aa12.56□□□□□ -0.4
AC007956.1-201ENST00000555623 MYO15BQ96JP2 1530 aa12.56□□□□□ -0.4
AC007956.1-201ENST00000555623 MSH5O43196 834 aa12.52□□□□□ -0.41
AC007956.1-201ENST00000555623 ZCCHC6Q5VYS8 1495 aaKnown RBP12.42□□□□□ -0.42
AC007956.1-201ENST00000555623 PLPPR3Q6T4P5 718 aa12.42□□□□□ -0.42
AC007956.1-201ENST00000555623 DCAF1Q9Y4B6 1507 aa12.42□□□□□ -0.42
AC007956.1-201ENST00000555623 PABPN1Q86U42 306 aaKnown RBP eCLIP12.35□□□□□ -0.43
AC007956.1-201ENST00000555623 PIAS4Q8N2W9 510 aaPredicted RBP12.35□□□□□ -0.43
AC007956.1-201ENST00000555623 PPP6R1Q9UPN7 881 aa12.33□□□□□ -0.44
AC007956.1-201ENST00000555623 DNAJC5BQ9UF47 199 aa12.32□□□□□ -0.44
AC007956.1-201ENST00000555623 UNC13AQ9UPW8 1703 aa12.3□□□□□ -0.44
AC007956.1-201ENST00000555623 BICRAQ9NZM4 1560 aa12.28□□□□□ -0.44
AC007956.1-201ENST00000555623 ADRA2BP18089 450 aa12.28□□□□□ -0.44
AC007956.1-201ENST00000555623 SHROOM4Q9ULL8 1493 aa12.26□□□□□ -0.45
AC007956.1-201ENST00000555623 SCRIBQ14160 1630 aa12.15□□□□□ -0.47
AC007956.1-201ENST00000555623 EIF4G1Q04637 1599 aaKnown RBP11.99□□□□□ -0.49
AC007956.1-201ENST00000555623 CC2D2AQ9P2K1 1620 aa11.97□□□□□ -0.49
AC007956.1-201ENST00000555623 CECR2Q9BXF3 1484 aa11.96□□□□□ -0.49
AC007956.1-201ENST00000555623 NCAPD3P42695 1498 aa11.69□□□□□ -0.54
AC007956.1-201ENST00000555623 ATAD2BQ9ULI0 1458 aa11.64□□□□□ -0.55
AC007956.1-201ENST00000555623 SMARCA2P51531 1590 aa11.64□□□□□ -0.55
AC007956.1-201ENST00000555623 SMARCA4P51532 1647 aa11.63□□□□□ -0.55
AC007956.1-201ENST00000555623 BAZ1AQ9NRL2 1556 aaPredicted RBP11.62□□□□□ -0.55
AC007956.1-201ENST00000555623 HMGXB3Q12766 1538 aa11.61□□□□□ -0.55
AC007956.1-201ENST00000555623 PEG3Q9GZU2 1588 aa11.55□□□□□ -0.56
AC007956.1-201ENST00000555623 BAZ1BQ9UIG0 1483 aaKnown RBP11.54□□□□□ -0.56
AC007956.1-201ENST00000555623 MROH2BQ7Z745 1585 aa11.5□□□□□ -0.57
AC007956.1-201ENST00000555623 ERCC6Q03468 1493 aa11.48□□□□□ -0.57
AC007956.1-201ENST00000555623 CUX2O14529 1486 aa11.46□□□□□ -0.57
AC007956.1-201ENST00000555623 LAMC3Q9Y6N6 1575 aa11.4□□□□□ -0.58
AC007956.1-201ENST00000555623 NESP48681 1621 aa11.39□□□□□ -0.59
AC007956.1-201ENST00000555623 PDS5BQ9NTI5 1447 aa11.35□□□□□ -0.59
AC007956.1-201ENST00000555623 CADPSQ9ULU8 1353 aa11.34□□□□□ -0.59
AC007956.1-201ENST00000555623 WIZO95785 1651 aa11.33□□□□□ -0.6
AC007956.1-201ENST00000555623 MAPK8IP2Q13387 824 aaPredicted RBP11.32□□□□□ -0.6
AC007956.1-201ENST00000555623 DNAJC5Q9H3Z4 198 aa11.32□□□□□ -0.6
AC007956.1-201ENST00000555623 RSF1Q96T23 1441 aaPredicted RBP11.32□□□□□ -0.6
AC007956.1-201ENST00000555623 THOC2Q8NI27 1593 aaKnown RBP11.28□□□□□ -0.6
AC007956.1-201ENST00000555623 TOP2AP11388 1531 aaKnown RBP11.26□□□□□ -0.61
AC007956.1-201ENST00000555623 CACNB1Q02641 598 aaPredicted RBP11.24□□□□□ -0.61
AC007956.1-201ENST00000555623 DMRT2Q9Y5R5 561 aa11.23□□□□□ -0.61
AC007956.1-201ENST00000555623 MRC2Q9UBG0 1479 aa11.23□□□□□ -0.61
AC007956.1-201ENST00000555623 KIF21AQ7Z4S6 1674 aa11.23□□□□□ -0.61
AC007956.1-201ENST00000555623 CFTRP13569 1480 aa11.22□□□□□ -0.61
AC007956.1-201ENST00000555623 CEP164Q9UPV0 1460 aa11.2□□□□□ -0.62
AC007956.1-201ENST00000555623 FANCD2Q9BXW9 1451 aa11.19□□□□□ -0.62
AC007956.1-201ENST00000555623 WDR62O43379 1518 aa11.18□□□□□ -0.62
AC007956.1-201ENST00000555623 SCAF1Q9H7N4 1312 aaKnown RBP11.14□□□□□ -0.63
AC007956.1-201ENST00000555623 CCDC88BA6NC98 1476 aa11.11□□□□□ -0.63
AC007956.1-201ENST00000555623 URB2Q14146 1524 aaKnown RBP11.06□□□□□ -0.64
AC007956.1-201ENST00000555623 PRDM2Q13029 1718 aa11.04□□□□□ -0.64
AC007956.1-201ENST00000555623 ABCC8Q09428 1581 aa11.03□□□□□ -0.64
AC007956.1-201ENST00000555623 IFT140Q96RY7 1462 aa10.99□□□□□ -0.65
AC007956.1-201ENST00000555623 TOPBP1Q92547 1522 aa10.98□□□□□ -0.65
AC007956.1-201ENST00000555623 DNMBPQ6XZF7 1577 aa10.95□□□□□ -0.66
AC007956.1-201ENST00000555623 OSCARQ8IYS5 282 aa10.95□□□□□ -0.66
AC007956.1-201ENST00000555623 PPP4R3CPQ6ZMV5 832 aa10.9□□□□□ -0.66
AC007956.1-201ENST00000555623 ZNF608Q9ULD9 1512 aaPredicted RBP10.89□□□□□ -0.67
AC007956.1-201ENST00000555623 POLA1P09884 1462 aaPredicted RBP10.87□□□□□ -0.67
AC007956.1-201ENST00000555623 SUPT5HO00267 1087 aaKnown RBP10.86□□□□□ -0.67
AC007956.1-201ENST00000555623 TARBP1Q13395 1621 aaKnown RBP10.84□□□□□ -0.67
AC007956.1-201ENST00000555623 EIF4G3O43432 1585 aaKnown RBP10.84□□□□□ -0.67
AC007956.1-201ENST00000555623 SOGA1O94964 1423 aa10.84□□□□□ -0.67
AC007956.1-201ENST00000555623 AQRO60306 1485 aaKnown RBP eCLIP10.82□□□□□ -0.68
AC007956.1-201ENST00000555623 TRIM41Q8WV44 630 aa10.82□□□□□ -0.68
AC007956.1-201ENST00000555623 WDR97A6NE52 1622 aa10.82□□□□□ -0.68
AC007956.1-201ENST00000555623 FGD5Q6ZNL6 1462 aa10.81□□□□□ -0.68
AC007956.1-201ENST00000555623 CUX1P39880 1505 aa10.8□□□□□ -0.68
AC007956.1-201ENST00000555623 RAD54L2Q9Y4B4 1467 aa10.8□□□□□ -0.68
AC007956.1-201ENST00000555623 DCAF8L1A6NGE4 600 aa10.79□□□□□ -0.68
AC007956.1-201ENST00000555623 TDRD9Q8NDG6 1382 aaKnown RBP10.77□□□□□ -0.68
AC007956.1-201ENST00000555623 HOXD11P31277 338 aaPredicted RBP10.75□□□□□ -0.69
AC007956.1-201ENST00000555623 FBLN2P98095 1184 aa10.75□□□□□ -0.69
AC007956.1-201ENST00000555623 GRIN2BQ13224 1484 aa10.74□□□□□ -0.69
AC007956.1-201ENST00000555623 MAGI1Q96QZ7 1491 aaPredicted RBP10.74□□□□□ -0.69
AC007956.1-201ENST00000555623 ARHGEF11O15085 1522 aa10.73□□□□□ -0.69
AC007956.1-201ENST00000555623 CHMP7Q8WUX9 453 aaPredicted RBP10.72□□□□□ -0.69
AC007956.1-201ENST00000555623 WRNQ14191 1432 aaPredicted RBP eCLIP10.72□□□□□ -0.69
AC007956.1-201ENST00000555623 SNAPC4Q5SXM2 1469 aa10.72□□□□□ -0.69
AC007956.1-201ENST00000555623 ABCA10Q8WWZ4 1543 aa10.72□□□□□ -0.69
AC007956.1-201ENST00000555623 RIMBP3CA6NJZ7 1639 aa10.72□□□□□ -0.69
AC007956.1-201ENST00000555623 RIMBP3BA6NNM3 1639 aa10.72□□□□□ -0.69
AC007956.1-201ENST00000555623 RIMBP3Q9UFD9 1639 aa10.72□□□□□ -0.69
AC007956.1-201ENST00000555623 CHD1O14646 1710 aa10.71□□□□□ -0.69
AC007956.1-201ENST00000555623 GAPVD1Q14C86 1478 aa10.7□□□□□ -0.7
AC007956.1-201ENST00000555623 CNKSR2Q8WXI2 1034 aa10.7□□□□□ -0.7
AC007956.1-201ENST00000555623 SYNJ2O15056 1496 aa10.69□□□□□ -0.7
AC007956.1-201ENST00000555623 TOP2BQ02880 1626 aa10.67□□□□□ -0.7
AC007956.1-201ENST00000555623 SYNJ1O43426 1573 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms