RNA–Protein interactions for RNA: ENST00000555370.5

IFT43-210, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-210ENST00000555370 NISCHQ9Y2I1 1504 aa26.8■■□□□ 1.88
IFT43-210ENST00000555370 ABCC9O60706 1549 aa25.02■■□□□ 1.6
IFT43-210ENST00000555370 DNAJC5BQ9UF47 199 aa24.9■■□□□ 1.58
IFT43-210ENST00000555370 DNAJC5Q9H3Z4 198 aa23.94■■□□□ 1.42
IFT43-210ENST00000555370 CCDC180Q9P1Z9 1646 aa23.64■■□□□ 1.38
IFT43-210ENST00000555370 PABPN1Q86U42 306 aaKnown RBP eCLIP23.13■■□□□ 1.29
IFT43-210ENST00000555370 RB1CC1Q8TDY2 1594 aa23.03■■□□□ 1.28
IFT43-210ENST00000555370 CECR2Q9BXF3 1484 aa22.68■■□□□ 1.22
IFT43-210ENST00000555370 ZCCHC6Q5VYS8 1495 aaKnown RBP22.5■■□□□ 1.19
IFT43-210ENST00000555370 NACADO15069 1562 aa22.49■■□□□ 1.19
IFT43-210ENST00000555370 CC2D2AQ9P2K1 1620 aa22.44■■□□□ 1.18
IFT43-210ENST00000555370 BICRAQ9NZM4 1560 aa22.43■■□□□ 1.18
IFT43-210ENST00000555370 UNC13AQ9UPW8 1703 aa22.41■■□□□ 1.18
IFT43-210ENST00000555370 TRIM41Q8WV44 630 aa22.33■■□□□ 1.17
IFT43-210ENST00000555370 DCAF8L2P0C7V8 631 aa22.29■■□□□ 1.16
IFT43-210ENST00000555370 DCAF1Q9Y4B6 1507 aa22.22■■□□□ 1.15
IFT43-210ENST00000555370 CUX2O14529 1486 aa22.11■■□□□ 1.13
IFT43-210ENST00000555370 MYO15BQ96JP2 1530 aa22.03■■□□□ 1.12
IFT43-210ENST00000555370 EIF4G1Q04637 1599 aaKnown RBP22.01■■□□□ 1.11
IFT43-210ENST00000555370 SHROOM4Q9ULL8 1493 aa21.9■■□□□ 1.1
IFT43-210ENST00000555370 ERCC6Q03468 1493 aa21.7■■□□□ 1.06
IFT43-210ENST00000555370 SCRIBQ14160 1630 aa21.58■■□□□ 1.05
IFT43-210ENST00000555370 AEBP2Q6ZN18 517 aaPredicted RBP21.41■■□□□ 1.02
IFT43-210ENST00000555370 NESP48681 1621 aa21.05■□□□□ 0.96
IFT43-210ENST00000555370 THOC2Q8NI27 1593 aaKnown RBP21.04■□□□□ 0.96
IFT43-210ENST00000555370 OSCARQ8IYS5 282 aa20.95■□□□□ 0.94
IFT43-210ENST00000555370 TRHP20396 242 aaPredicted RBP20.89■□□□□ 0.93
IFT43-210ENST00000555370 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
IFT43-210ENST00000555370 NCAPD3P42695 1498 aa20.83■□□□□ 0.93
IFT43-210ENST00000555370 BAZ1AQ9NRL2 1556 aaPredicted RBP20.81■□□□□ 0.92
IFT43-210ENST00000555370 ILDR1Q86SU0 546 aaPredicted RBP20.8■□□□□ 0.92
IFT43-210ENST00000555370 RIMBP3CA6NJZ7 1639 aa20.75■□□□□ 0.91
IFT43-210ENST00000555370 RIMBP3BA6NNM3 1639 aa20.75■□□□□ 0.91
IFT43-210ENST00000555370 RIMBP3Q9UFD9 1639 aa20.75■□□□□ 0.91
IFT43-210ENST00000555370 SMARCA4P51532 1647 aa20.71■□□□□ 0.91
IFT43-210ENST00000555370 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
IFT43-210ENST00000555370 RSF1Q96T23 1441 aaPredicted RBP20.66■□□□□ 0.9
IFT43-210ENST00000555370 SUPT5HO00267 1087 aaKnown RBP20.64■□□□□ 0.89
IFT43-210ENST00000555370 KIF21AQ7Z4S6 1674 aa20.61■□□□□ 0.89
IFT43-210ENST00000555370 CYB5RLQ6IPT4 315 aa20.6■□□□□ 0.89
IFT43-210ENST00000555370 ATAD2BQ9ULI0 1458 aa20.56■□□□□ 0.88
IFT43-210ENST00000555370 PDS5BQ9NTI5 1447 aa20.56■□□□□ 0.88
IFT43-210ENST00000555370 WIZO95785 1651 aa20.56■□□□□ 0.88
IFT43-210ENST00000555370 LAMC3Q9Y6N6 1575 aa20.55■□□□□ 0.88
IFT43-210ENST00000555370 ARHGEF11O15085 1522 aa20.55■□□□□ 0.88
IFT43-210ENST00000555370 HMGXB3Q12766 1538 aa20.48■□□□□ 0.87
IFT43-210ENST00000555370 PEG3Q9GZU2 1588 aa20.46■□□□□ 0.87
IFT43-210ENST00000555370 MRC2Q9UBG0 1479 aa20.46■□□□□ 0.87
IFT43-210ENST00000555370 WDR62O43379 1518 aa20.42■□□□□ 0.86
IFT43-210ENST00000555370 TOP2AP11388 1531 aaKnown RBP20.35■□□□□ 0.85
IFT43-210ENST00000555370 BAZ1BQ9UIG0 1483 aaKnown RBP20.28■□□□□ 0.84
IFT43-210ENST00000555370 ARAP1Q96P48 1450 aa20.26■□□□□ 0.83
IFT43-210ENST00000555370 CADPSQ9ULU8 1353 aa20.16■□□□□ 0.82
IFT43-210ENST00000555370 CEP164Q9UPV0 1460 aa20.06■□□□□ 0.8
IFT43-210ENST00000555370 CCDC88BA6NC98 1476 aa20.05■□□□□ 0.8
IFT43-210ENST00000555370 FANCD2Q9BXW9 1451 aa19.93■□□□□ 0.78
IFT43-210ENST00000555370 ZNF608Q9ULD9 1512 aaPredicted RBP19.89■□□□□ 0.77
IFT43-210ENST00000555370 URB2Q14146 1524 aaKnown RBP19.86■□□□□ 0.77
IFT43-210ENST00000555370 PRDM2Q13029 1718 aa19.85■□□□□ 0.77
IFT43-210ENST00000555370 KDM4FA0A1W2PPD8 638 aa19.82■□□□□ 0.76
IFT43-210ENST00000555370 FBLN2P98095 1184 aa19.79■□□□□ 0.76
IFT43-210ENST00000555370 CHD1O14646 1710 aa19.73■□□□□ 0.75
IFT43-210ENST00000555370 IFT140Q96RY7 1462 aa19.73■□□□□ 0.75
IFT43-210ENST00000555370 CHIC1Q5VXU3 224 aa19.7■□□□□ 0.74
IFT43-210ENST00000555370 CFTRP13569 1480 aa19.68■□□□□ 0.74
IFT43-210ENST00000555370 FBXO41Q8TF61 875 aa19.67■□□□□ 0.74
IFT43-210ENST00000555370 EIF4G3O43432 1585 aaKnown RBP19.62■□□□□ 0.73
IFT43-210ENST00000555370 LMTK3Q96Q04 1460 aa19.62■□□□□ 0.73
IFT43-210ENST00000555370 ABCC8Q09428 1581 aa19.6■□□□□ 0.73
IFT43-210ENST00000555370 ERCC6L2Q5T890 1561 aa19.54■□□□□ 0.72
IFT43-210ENST00000555370 SOCS7O14512 581 aa19.54■□□□□ 0.72
IFT43-210ENST00000555370 AQRO60306 1485 aaKnown RBP eCLIP19.54■□□□□ 0.72
IFT43-210ENST00000555370 CLASP1Q7Z460 1538 aa19.51■□□□□ 0.71
IFT43-210ENST00000555370 GAPVD1Q14C86 1478 aa19.5■□□□□ 0.71
IFT43-210ENST00000555370 WRNQ14191 1432 aaPredicted RBP eCLIP19.47■□□□□ 0.71
IFT43-210ENST00000555370 BIVM-ERCC5R4GMW8 1640 aa19.47■□□□□ 0.71
IFT43-210ENST00000555370 SYNJ1O43426 1573 aa19.46■□□□□ 0.71
IFT43-210ENST00000555370 HECW2Q9P2P5 1572 aa19.44■□□□□ 0.7
IFT43-210ENST00000555370 TOP2BQ02880 1626 aa19.43■□□□□ 0.7
IFT43-210ENST00000555370 ILDR2Q71H61 639 aa19.42■□□□□ 0.7
IFT43-210ENST00000555370 CUX1P39880 1505 aa19.37■□□□□ 0.69
IFT43-210ENST00000555370 TOPBP1Q92547 1522 aa19.36■□□□□ 0.69
IFT43-210ENST00000555370 CHMP7Q8WUX9 453 aaPredicted RBP19.35■□□□□ 0.69
IFT43-210ENST00000555370 KIF13AQ9H1H9 1805 aa19.33■□□□□ 0.69
IFT43-210ENST00000555370 DNMBPQ6XZF7 1577 aa19.32■□□□□ 0.68
IFT43-210ENST00000555370 SYNJ2O15056 1496 aa19.27■□□□□ 0.67
IFT43-210ENST00000555370 TARBP1Q13395 1621 aaKnown RBP19.26■□□□□ 0.67
IFT43-210ENST00000555370 FAM69CQ0P6D2 419 aa19.26■□□□□ 0.67
IFT43-210ENST00000555370 SNAPC4Q5SXM2 1469 aa19.25■□□□□ 0.67
IFT43-210ENST00000555370 ADGRL1O94910 1474 aa19.24■□□□□ 0.67
IFT43-210ENST00000555370 DISP3Q9P2K9 1392 aa19.23■□□□□ 0.67
IFT43-210ENST00000555370 KDM6BO15054 1643 aa19.23■□□□□ 0.67
IFT43-210ENST00000555370 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
IFT43-210ENST00000555370 FGD5Q6ZNL6 1462 aa19.18■□□□□ 0.66
IFT43-210ENST00000555370 EEA1Q15075 1411 aa19.15■□□□□ 0.66
IFT43-210ENST00000555370 SOGA1O94964 1423 aa19.12■□□□□ 0.65
IFT43-210ENST00000555370 WDR97A6NE52 1622 aa19.11■□□□□ 0.65
IFT43-210ENST00000555370 ABCC10Q5T3U5 1492 aa19.11■□□□□ 0.65
IFT43-210ENST00000555370 POLA1P09884 1462 aaPredicted RBP19.1■□□□□ 0.65
IFT43-210ENST00000555370 MAGI1Q96QZ7 1491 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms