RNA–Protein interactions for RNA: ENST00000554886.1

ATL1-205, Transcript of atlastin GTPase 1, humanhuman

TSL 4

Gene ATL1, Length 545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-205ENST00000554886 NISCHQ9Y2I1 1504 aa32.53■■■□□ 2.8
ATL1-205ENST00000554886 CCDC180Q9P1Z9 1646 aa28.8■■■□□ 2.2
ATL1-205ENST00000554886 ABCC9O60706 1549 aa28.1■■■□□ 2.09
ATL1-205ENST00000554886 DCAF8L2P0C7V8 631 aa27.34■■□□□ 1.97
ATL1-205ENST00000554886 NACADO15069 1562 aa27.11■■□□□ 1.93
ATL1-205ENST00000554886 RB1CC1Q8TDY2 1594 aa27.1■■□□□ 1.93
ATL1-205ENST00000554886 ZCCHC6Q5VYS8 1495 aaKnown RBP27.09■■□□□ 1.93
ATL1-205ENST00000554886 MYO15BQ96JP2 1530 aa26.98■■□□□ 1.91
ATL1-205ENST00000554886 DCAF1Q9Y4B6 1507 aa26.91■■□□□ 1.9
ATL1-205ENST00000554886 UNC13AQ9UPW8 1703 aa26.37■■□□□ 1.81
ATL1-205ENST00000554886 PABPN1Q86U42 306 aaKnown RBP eCLIP26.36■■□□□ 1.81
ATL1-205ENST00000554886 SCRIBQ14160 1630 aa26.31■■□□□ 1.8
ATL1-205ENST00000554886 BICRAQ9NZM4 1560 aa26.18■■□□□ 1.78
ATL1-205ENST00000554886 SHROOM4Q9ULL8 1493 aa25.98■■□□□ 1.75
ATL1-205ENST00000554886 DNAJC5BQ9UF47 199 aa25.66■■□□□ 1.7
ATL1-205ENST00000554886 EIF4G1Q04637 1599 aaKnown RBP25.52■■□□□ 1.68
ATL1-205ENST00000554886 CC2D2AQ9P2K1 1620 aa25.39■■□□□ 1.66
ATL1-205ENST00000554886 CECR2Q9BXF3 1484 aa25.32■■□□□ 1.64
ATL1-205ENST00000554886 BAZ1AQ9NRL2 1556 aaPredicted RBP25.22■■□□□ 1.63
ATL1-205ENST00000554886 SMARCA4P51532 1647 aa25.18■■□□□ 1.62
ATL1-205ENST00000554886 MROH2BQ7Z745 1585 aa25.05■■□□□ 1.6
ATL1-205ENST00000554886 ATAD2BQ9ULI0 1458 aa25.05■■□□□ 1.6
ATL1-205ENST00000554886 SMARCA2P51531 1590 aa25.04■■□□□ 1.6
ATL1-205ENST00000554886 NCAPD3P42695 1498 aa25.02■■□□□ 1.6
ATL1-205ENST00000554886 PEG3Q9GZU2 1588 aa24.92■■□□□ 1.58
ATL1-205ENST00000554886 BAZ1BQ9UIG0 1483 aaKnown RBP24.87■■□□□ 1.57
ATL1-205ENST00000554886 RSF1Q96T23 1441 aaPredicted RBP24.86■■□□□ 1.57
ATL1-205ENST00000554886 HMGXB3Q12766 1538 aa24.86■■□□□ 1.57
ATL1-205ENST00000554886 WIZO95785 1651 aa24.78■■□□□ 1.56
ATL1-205ENST00000554886 TOP2AP11388 1531 aaKnown RBP24.54■■□□□ 1.52
ATL1-205ENST00000554886 SUPT5HO00267 1087 aaKnown RBP24.5■■□□□ 1.51
ATL1-205ENST00000554886 CADPSQ9ULU8 1353 aa24.34■■□□□ 1.49
ATL1-205ENST00000554886 NESP48681 1621 aa24.32■■□□□ 1.48
ATL1-205ENST00000554886 LAMC3Q9Y6N6 1575 aa24.31■■□□□ 1.48
ATL1-205ENST00000554886 CCDC88BA6NC98 1476 aa24.3■■□□□ 1.48
ATL1-205ENST00000554886 ERCC6Q03468 1493 aa24.26■■□□□ 1.47
ATL1-205ENST00000554886 PDS5BQ9NTI5 1447 aa24.23■■□□□ 1.47
ATL1-205ENST00000554886 CFTRP13569 1480 aa24.18■■□□□ 1.46
ATL1-205ENST00000554886 FANCD2Q9BXW9 1451 aa24.02■■□□□ 1.44
ATL1-205ENST00000554886 KIF21AQ7Z4S6 1674 aa24.01■■□□□ 1.43
ATL1-205ENST00000554886 CEP164Q9UPV0 1460 aa23.98■■□□□ 1.43
ATL1-205ENST00000554886 PRDM2Q13029 1718 aa23.93■■□□□ 1.42
ATL1-205ENST00000554886 CUX2O14529 1486 aa23.9■■□□□ 1.42
ATL1-205ENST00000554886 MRC2Q9UBG0 1479 aa23.9■■□□□ 1.42
ATL1-205ENST00000554886 THOC2Q8NI27 1593 aaKnown RBP23.86■■□□□ 1.41
ATL1-205ENST00000554886 WDR62O43379 1518 aa23.76■■□□□ 1.39
ATL1-205ENST00000554886 URB2Q14146 1524 aaKnown RBP23.73■■□□□ 1.39
ATL1-205ENST00000554886 ABCC8Q09428 1581 aa23.73■■□□□ 1.39
ATL1-205ENST00000554886 TOPBP1Q92547 1522 aa23.64■■□□□ 1.37
ATL1-205ENST00000554886 DNMBPQ6XZF7 1577 aa23.61■■□□□ 1.37
ATL1-205ENST00000554886 IFT140Q96RY7 1462 aa23.49■■□□□ 1.35
ATL1-205ENST00000554886 CUX1P39880 1505 aa23.49■■□□□ 1.35
ATL1-205ENST00000554886 WRNQ14191 1432 aaPredicted RBP eCLIP23.47■■□□□ 1.35
ATL1-205ENST00000554886 POLA1P09884 1462 aaPredicted RBP23.44■■□□□ 1.34
ATL1-205ENST00000554886 SOGA1O94964 1423 aa23.43■■□□□ 1.34
ATL1-205ENST00000554886 FGD5Q6ZNL6 1462 aa23.42■■□□□ 1.34
ATL1-205ENST00000554886 RAD54L2Q9Y4B4 1467 aa23.36■■□□□ 1.33
ATL1-205ENST00000554886 TOP2BQ02880 1626 aa23.34■■□□□ 1.33
ATL1-205ENST00000554886 TARBP1Q13395 1621 aaKnown RBP23.32■■□□□ 1.32
ATL1-205ENST00000554886 BIVM-ERCC5R4GMW8 1640 aa23.31■■□□□ 1.32
ATL1-205ENST00000554886 ZNF608Q9ULD9 1512 aaPredicted RBP23.31■■□□□ 1.32
ATL1-205ENST00000554886 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
ATL1-205ENST00000554886 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.31
ATL1-205ENST00000554886 AQRO60306 1485 aaKnown RBP eCLIP23.26■■□□□ 1.31
ATL1-205ENST00000554886 ABCA10Q8WWZ4 1543 aa23.2■■□□□ 1.3
ATL1-205ENST00000554886 EIF4G3O43432 1585 aaKnown RBP23.18■■□□□ 1.3
ATL1-205ENST00000554886 WDR97A6NE52 1622 aa23.18■■□□□ 1.3
ATL1-205ENST00000554886 TRIM41Q8WV44 630 aa23.16■■□□□ 1.3
ATL1-205ENST00000554886 GAPVD1Q14C86 1478 aa23.13■■□□□ 1.29
ATL1-205ENST00000554886 GRIN2BQ13224 1484 aa23.11■■□□□ 1.29
ATL1-205ENST00000554886 OSCARQ8IYS5 282 aa23.08■■□□□ 1.29
ATL1-205ENST00000554886 FBLN2P98095 1184 aa23.07■■□□□ 1.28
ATL1-205ENST00000554886 DNAJC5Q9H3Z4 198 aa23.06■■□□□ 1.28
ATL1-205ENST00000554886 CHMP7Q8WUX9 453 aaPredicted RBP23.03■■□□□ 1.28
ATL1-205ENST00000554886 ABCA5Q8WWZ7 1642 aa23.03■■□□□ 1.28
ATL1-205ENST00000554886 KIF27Q86VH2 1401 aa23■■□□□ 1.27
ATL1-205ENST00000554886 SNAPC4Q5SXM2 1469 aa23■■□□□ 1.27
ATL1-205ENST00000554886 MAGI1Q96QZ7 1491 aaPredicted RBP23■■□□□ 1.27
ATL1-205ENST00000554886 PBRM1Q86U86 1689 aa22.97■■□□□ 1.27
ATL1-205ENST00000554886 ERICH3Q5RHP9 1530 aa22.93■■□□□ 1.26
ATL1-205ENST00000554886 CHIC1Q5VXU3 224 aa22.92■■□□□ 1.26
ATL1-205ENST00000554886 SYNJ2O15056 1496 aa22.92■■□□□ 1.26
ATL1-205ENST00000554886 IGF1RP08069 1367 aa22.89■■□□□ 1.25
ATL1-205ENST00000554886 FHAD1B1AJZ9 1412 aa22.88■■□□□ 1.25
ATL1-205ENST00000554886 CHD1O14646 1710 aa22.87■■□□□ 1.25
ATL1-205ENST00000554886 ADAMTS12P58397 1594 aa22.8■■□□□ 1.24
ATL1-205ENST00000554886 CARMIL1Q5VZK9 1371 aa22.77■■□□□ 1.24
ATL1-205ENST00000554886 GRIN2AQ12879 1464 aa22.77■■□□□ 1.24
ATL1-205ENST00000554886 RUSC2Q8N2Y8 1516 aa22.77■■□□□ 1.24
ATL1-205ENST00000554886 CUL7Q14999 1698 aa22.74■■□□□ 1.23
ATL1-205ENST00000554886 CSRNP3Q8WYN3 585 aa22.69■■□□□ 1.22
ATL1-205ENST00000554886 EEA1Q15075 1411 aa22.67■■□□□ 1.22
ATL1-205ENST00000554886 NUP160Q12769 1436 aa22.65■■□□□ 1.22
ATL1-205ENST00000554886 FAM9AQ8IZU1 332 aaPredicted RBP22.64■■□□□ 1.21
ATL1-205ENST00000554886 CLASP1Q7Z460 1538 aa22.62■■□□□ 1.21
ATL1-205ENST00000554886 RAPGEF2Q9Y4G8 1499 aa22.62■■□□□ 1.21
ATL1-205ENST00000554886 CEP170Q5SW79 1584 aa22.6■■□□□ 1.21
ATL1-205ENST00000554886 JPH4Q96JJ6 628 aa22.56■■□□□ 1.2
ATL1-205ENST00000554886 ARHGEF11O15085 1522 aa22.54■■□□□ 1.2
ATL1-205ENST00000554886 PRXQ9BXM0 1461 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms