RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 NISCHQ9Y2I1 1504 aa8.32□□□□□ -1.08
SEC23A-207ENST00000554615 CCDC180Q9P1Z9 1646 aa7.59□□□□□ -1.19
SEC23A-207ENST00000554615 AEBP2Q6ZN18 517 aaPredicted RBP7.36□□□□□ -1.23
SEC23A-207ENST00000554615 DCAF1Q9Y4B6 1507 aa7.28□□□□□ -1.24
SEC23A-207ENST00000554615 ZCCHC6Q5VYS8 1495 aaKnown RBP7.16□□□□□ -1.26
SEC23A-207ENST00000554615 MYO15BQ96JP2 1530 aa7.16□□□□□ -1.26
SEC23A-207ENST00000554615 POTEDQ86YR6 584 aa7.06□□□□□ -1.28
SEC23A-207ENST00000554615 ABCC9O60706 1549 aa6.82□□□□□ -1.32
SEC23A-207ENST00000554615 CHIC1Q5VXU3 224 aa6.81□□□□□ -1.32
SEC23A-207ENST00000554615 EIF4G1Q04637 1599 aaKnown RBP6.78□□□□□ -1.32
SEC23A-207ENST00000554615 UNC13AQ9UPW8 1703 aa6.75□□□□□ -1.33
SEC23A-207ENST00000554615 NACADO15069 1562 aa6.72□□□□□ -1.33
SEC23A-207ENST00000554615 PEG3Q9GZU2 1588 aa6.64□□□□□ -1.35
SEC23A-207ENST00000554615 SHROOM4Q9ULL8 1493 aa6.62□□□□□ -1.35
SEC23A-207ENST00000554615 BAZ1AQ9NRL2 1556 aaPredicted RBP6.56□□□□□ -1.36
SEC23A-207ENST00000554615 RB1CC1Q8TDY2 1594 aa6.55□□□□□ -1.36
SEC23A-207ENST00000554615 PRDM2Q13029 1718 aa6.53□□□□□ -1.36
SEC23A-207ENST00000554615 BICRAQ9NZM4 1560 aa6.48□□□□□ -1.37
SEC23A-207ENST00000554615 SMARCA4P51532 1647 aa6.43□□□□□ -1.38
SEC23A-207ENST00000554615 TOP2AP11388 1531 aaKnown RBP6.41□□□□□ -1.38
SEC23A-207ENST00000554615 SMARCA2P51531 1590 aa6.4□□□□□ -1.38
SEC23A-207ENST00000554615 RSF1Q96T23 1441 aaPredicted RBP6.38□□□□□ -1.39
SEC23A-207ENST00000554615 SCRIBQ14160 1630 aa6.36□□□□□ -1.39
SEC23A-207ENST00000554615 BIVM-ERCC5R4GMW8 1640 aa6.34□□□□□ -1.39
SEC23A-207ENST00000554615 WIZO95785 1651 aa6.34□□□□□ -1.39
SEC23A-207ENST00000554615 MROH2BQ7Z745 1585 aa6.32□□□□□ -1.4
SEC23A-207ENST00000554615 SENP3Q9H4L4 574 aaPredicted RBP6.3□□□□□ -1.4
SEC23A-207ENST00000554615 HMGXB3Q12766 1538 aa6.29□□□□□ -1.4
SEC23A-207ENST00000554615 KIF21BO75037 1637 aa6.24□□□□□ -1.41
SEC23A-207ENST00000554615 WDR97A6NE52 1622 aa6.22□□□□□ -1.41
SEC23A-207ENST00000554615 CECR2Q9BXF3 1484 aa6.19□□□□□ -1.42
SEC23A-207ENST00000554615 TOP2BQ02880 1626 aa6.18□□□□□ -1.42
SEC23A-207ENST00000554615 WRNQ14191 1432 aaPredicted RBP eCLIP6.16□□□□□ -1.42
SEC23A-207ENST00000554615 ERICH3Q5RHP9 1530 aa6.11□□□□□ -1.43
SEC23A-207ENST00000554615 CCDC88BA6NC98 1476 aa6.11□□□□□ -1.43
SEC23A-207ENST00000554615 KIF21AQ7Z4S6 1674 aa6.1□□□□□ -1.43
SEC23A-207ENST00000554615 EEA1Q15075 1411 aa6.1□□□□□ -1.43
SEC23A-207ENST00000554615 SYNJ1O43426 1573 aa6.09□□□□□ -1.43
SEC23A-207ENST00000554615 NCAPD3P42695 1498 aa6.09□□□□□ -1.43
SEC23A-207ENST00000554615 BAZ1BQ9UIG0 1483 aaKnown RBP6.09□□□□□ -1.43
SEC23A-207ENST00000554615 ATAD2BQ9ULI0 1458 aa6.07□□□□□ -1.44
SEC23A-207ENST00000554615 PHF23Q9BUL5 403 aaPredicted RBP6.07□□□□□ -1.44
SEC23A-207ENST00000554615 CFAP43Q8NDM7 1665 aa6.04□□□□□ -1.44
SEC23A-207ENST00000554615 MAP3K1Q13233 1512 aa6.04□□□□□ -1.44
SEC23A-207ENST00000554615 CC2D2AQ9P2K1 1620 aa6.01□□□□□ -1.45
SEC23A-207ENST00000554615 CUX2O14529 1486 aa6□□□□□ -1.45
SEC23A-207ENST00000554615 CTTNBP2Q8WZ74 1663 aa6□□□□□ -1.45
SEC23A-207ENST00000554615 CFTRP13569 1480 aa5.99□□□□□ -1.45
SEC23A-207ENST00000554615 ABCA5Q8WWZ7 1642 aa5.98□□□□□ -1.45
SEC23A-207ENST00000554615 LRRIQ1Q96JM4 1722 aa5.97□□□□□ -1.45
SEC23A-207ENST00000554615 CUL7Q14999 1698 aa5.97□□□□□ -1.45
SEC23A-207ENST00000554615 PRXQ9BXM0 1461 aa5.96□□□□□ -1.45
SEC23A-207ENST00000554615 SAMD9Q5K651 1589 aa5.95□□□□□ -1.46
SEC23A-207ENST00000554615 ABCC8Q09428 1581 aa5.95□□□□□ -1.46
SEC23A-207ENST00000554615 CUX1P39880 1505 aa5.95□□□□□ -1.46
SEC23A-207ENST00000554615 THOC2Q8NI27 1593 aaKnown RBP5.93□□□□□ -1.46
SEC23A-207ENST00000554615 TNIKQ9UKE5 1360 aa5.92□□□□□ -1.46
SEC23A-207ENST00000554615 LAMC3Q9Y6N6 1575 aa5.92□□□□□ -1.46
SEC23A-207ENST00000554615 MSH5O43196 834 aa5.92□□□□□ -1.46
SEC23A-207ENST00000554615 DNMBPQ6XZF7 1577 aa5.91□□□□□ -1.46
SEC23A-207ENST00000554615 TARBP1Q13395 1621 aaKnown RBP5.9□□□□□ -1.46
SEC23A-207ENST00000554615 PBRM1Q86U86 1689 aa5.89□□□□□ -1.47
SEC23A-207ENST00000554615 CEP164Q9UPV0 1460 aa5.88□□□□□ -1.47
SEC23A-207ENST00000554615 ARHGEF11O15085 1522 aa5.88□□□□□ -1.47
SEC23A-207ENST00000554615 GOLGA3Q08378 1498 aa5.88□□□□□ -1.47
SEC23A-207ENST00000554615 AQRO60306 1485 aaKnown RBP eCLIP5.88□□□□□ -1.471e-9■■□□□ 12
SEC23A-207ENST00000554615 POLR1AO95602 1720 aaPredicted RBP5.87□□□□□ -1.47
SEC23A-207ENST00000554615 FOXD1Q16676 465 aa5.86□□□□□ -1.47
SEC23A-207ENST00000554615 EFCAB5A4FU69 1503 aa5.86□□□□□ -1.47
SEC23A-207ENST00000554615 ADCY10Q96PN6 1610 aa5.85□□□□□ -1.47
SEC23A-207ENST00000554615 ABCA10Q8WWZ4 1543 aa5.85□□□□□ -1.47
SEC23A-207ENST00000554615 ARAP1Q96P48 1450 aa5.85□□□□□ -1.47
SEC23A-207ENST00000554615 HRCP23327 699 aa5.83□□□□□ -1.48
SEC23A-207ENST00000554615 GCC2Q8IWJ2 1684 aa5.83□□□□□ -1.48
SEC23A-207ENST00000554615 CROCC2H7BZ55 1655 aa5.81□□□□□ -1.48
SEC23A-207ENST00000554615 RRBP1Q9P2E9 1410 aaKnown RBP5.8□□□□□ -1.48
SEC23A-207ENST00000554615 RUSC2Q8N2Y8 1516 aa5.8□□□□□ -1.48
SEC23A-207ENST00000554615 TIAM1Q13009 1591 aa5.8□□□□□ -1.48
SEC23A-207ENST00000554615 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.79□□□□□ -1.48
SEC23A-207ENST00000554615 CEP162Q5TB80 1403 aa5.78□□□□□ -1.48
SEC23A-207ENST00000554615 WDR62O43379 1518 aa5.78□□□□□ -1.48
SEC23A-207ENST00000554615 SOGA1O94964 1423 aa5.78□□□□□ -1.48
SEC23A-207ENST00000554615 VPS8Q8N3P4 1428 aa5.77□□□□□ -1.49
SEC23A-207ENST00000554615 ADAMTS12P58397 1594 aa5.77□□□□□ -1.49
SEC23A-207ENST00000554615 SNAPC4Q5SXM2 1469 aa5.76□□□□□ -1.49
SEC23A-207ENST00000554615 SHROOM2Q13796 1616 aa5.74□□□□□ -1.49
SEC23A-207ENST00000554615 HECW1Q76N89 1606 aa5.74□□□□□ -1.49
SEC23A-207ENST00000554615 RAPGEF2Q9Y4G8 1499 aa5.73□□□□□ -1.49
SEC23A-207ENST00000554615 ARHGAP35Q9NRY4 1499 aa5.73□□□□□ -1.49
SEC23A-207ENST00000554615 KDM5BQ9UGL1 1544 aa5.73□□□□□ -1.49
SEC23A-207ENST00000554615 PCF11O94913 1555 aaKnown RBP5.73□□□□□ -1.49
SEC23A-207ENST00000554615 TCOF1Q13428 1488 aaKnown RBP5.73□□□□□ -1.49
SEC23A-207ENST00000554615 TOPBP1Q92547 1522 aa5.72□□□□□ -1.49
SEC23A-207ENST00000554615 FYCO1Q9BQS8 1478 aa5.72□□□□□ -1.49
SEC23A-207ENST00000554615 ADGBQ8N7X0 1667 aa5.72□□□□□ -1.49
SEC23A-207ENST00000554615 SUPT5HO00267 1087 aaKnown RBP5.72□□□□□ -1.49
SEC23A-207ENST00000554615 FGD5Q6ZNL6 1462 aa5.72□□□□□ -1.49
SEC23A-207ENST00000554615 UGGT2Q9NYU1 1516 aa5.72□□□□□ -1.49
SEC23A-207ENST00000554615 IQGAP2Q13576 1575 aa5.72□□□□□ -1.49
SEC23A-207ENST00000554615 CLIP1P30622 1438 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms