RNA–Protein interactions for RNA: ENST00000554499.1

PLEKHG3-208, Transcript of pleckstrin homology and RhoGEF domain containing G3, humanhuman

TSL 3

Gene PLEKHG3, Length 658 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHG3-208ENST00000554499 NISCHQ9Y2I1 1504 aa32.36■■■□□ 2.77
PLEKHG3-208ENST00000554499 CCDC180Q9P1Z9 1646 aa28.72■■■□□ 2.19
PLEKHG3-208ENST00000554499 ABCC9O60706 1549 aa27.68■■■□□ 2.02
PLEKHG3-208ENST00000554499 ZCCHC6Q5VYS8 1495 aaKnown RBP27.01■■□□□ 1.91
PLEKHG3-208ENST00000554499 NACADO15069 1562 aa26.9■■□□□ 1.9
PLEKHG3-208ENST00000554499 MYO15BQ96JP2 1530 aa26.86■■□□□ 1.89
PLEKHG3-208ENST00000554499 RB1CC1Q8TDY2 1594 aa26.85■■□□□ 1.89
PLEKHG3-208ENST00000554499 DCAF1Q9Y4B6 1507 aa26.85■■□□□ 1.89
PLEKHG3-208ENST00000554499 DCAF8L2P0C7V8 631 aa26.83■■□□□ 1.89
PLEKHG3-208ENST00000554499 UNC13AQ9UPW8 1703 aa26.28■■□□□ 1.8
PLEKHG3-208ENST00000554499 SCRIBQ14160 1630 aa26.11■■□□□ 1.77
PLEKHG3-208ENST00000554499 BICRAQ9NZM4 1560 aa25.99■■□□□ 1.75
PLEKHG3-208ENST00000554499 PABPN1Q86U42 306 aaKnown RBP eCLIP25.88■■□□□ 1.73
PLEKHG3-208ENST00000554499 SHROOM4Q9ULL8 1493 aa25.81■■□□□ 1.72
PLEKHG3-208ENST00000554499 EIF4G1Q04637 1599 aaKnown RBP25.29■■□□□ 1.64
PLEKHG3-208ENST00000554499 CECR2Q9BXF3 1484 aa25.13■■□□□ 1.61
PLEKHG3-208ENST00000554499 DNAJC5BQ9UF47 199 aa25.11■■□□□ 1.61
PLEKHG3-208ENST00000554499 CC2D2AQ9P2K1 1620 aa25.11■■□□□ 1.61
PLEKHG3-208ENST00000554499 BAZ1AQ9NRL2 1556 aaPredicted RBP25.09■■□□□ 1.61
PLEKHG3-208ENST00000554499 SMARCA4P51532 1647 aa25.06■■□□□ 1.6
PLEKHG3-208ENST00000554499 MROH2BQ7Z745 1585 aa24.92■■□□□ 1.58
PLEKHG3-208ENST00000554499 SMARCA2P51531 1590 aa24.84■■□□□ 1.57
PLEKHG3-208ENST00000554499 PEG3Q9GZU2 1588 aa24.84■■□□□ 1.57
PLEKHG3-208ENST00000554499 ATAD2BQ9ULI0 1458 aa24.83■■□□□ 1.56
PLEKHG3-208ENST00000554499 NCAPD3P42695 1498 aa24.79■■□□□ 1.56
PLEKHG3-208ENST00000554499 RSF1Q96T23 1441 aaPredicted RBP24.74■■□□□ 1.55
PLEKHG3-208ENST00000554499 HMGXB3Q12766 1538 aa24.71■■□□□ 1.55
PLEKHG3-208ENST00000554499 WIZO95785 1651 aa24.69■■□□□ 1.54
PLEKHG3-208ENST00000554499 BAZ1BQ9UIG0 1483 aaKnown RBP24.64■■□□□ 1.53
PLEKHG3-208ENST00000554499 TOP2AP11388 1531 aaKnown RBP24.45■■□□□ 1.5
PLEKHG3-208ENST00000554499 SUPT5HO00267 1087 aaKnown RBP24.28■■□□□ 1.48
PLEKHG3-208ENST00000554499 CCDC88BA6NC98 1476 aa24.13■■□□□ 1.45
PLEKHG3-208ENST00000554499 LAMC3Q9Y6N6 1575 aa24.12■■□□□ 1.45
PLEKHG3-208ENST00000554499 CADPSQ9ULU8 1353 aa24.06■■□□□ 1.44
PLEKHG3-208ENST00000554499 NESP48681 1621 aa24.04■■□□□ 1.44
PLEKHG3-208ENST00000554499 CFTRP13569 1480 aa24■■□□□ 1.43
PLEKHG3-208ENST00000554499 PRDM2Q13029 1718 aa23.94■■□□□ 1.42
PLEKHG3-208ENST00000554499 PDS5BQ9NTI5 1447 aa23.92■■□□□ 1.42
PLEKHG3-208ENST00000554499 ERCC6Q03468 1493 aa23.85■■□□□ 1.41
PLEKHG3-208ENST00000554499 KIF21AQ7Z4S6 1674 aa23.84■■□□□ 1.41
PLEKHG3-208ENST00000554499 FANCD2Q9BXW9 1451 aa23.78■■□□□ 1.4
PLEKHG3-208ENST00000554499 CEP164Q9UPV0 1460 aa23.73■■□□□ 1.39
PLEKHG3-208ENST00000554499 THOC2Q8NI27 1593 aaKnown RBP23.67■■□□□ 1.38
PLEKHG3-208ENST00000554499 MRC2Q9UBG0 1479 aa23.63■■□□□ 1.37
PLEKHG3-208ENST00000554499 WDR62O43379 1518 aa23.56■■□□□ 1.36
PLEKHG3-208ENST00000554499 CUX2O14529 1486 aa23.55■■□□□ 1.36
PLEKHG3-208ENST00000554499 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
PLEKHG3-208ENST00000554499 URB2Q14146 1524 aaKnown RBP23.51■■□□□ 1.35
PLEKHG3-208ENST00000554499 DNMBPQ6XZF7 1577 aa23.46■■□□□ 1.35
PLEKHG3-208ENST00000554499 TOPBP1Q92547 1522 aa23.43■■□□□ 1.34
PLEKHG3-208ENST00000554499 CUX1P39880 1505 aa23.36■■□□□ 1.33
PLEKHG3-208ENST00000554499 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.32
PLEKHG3-208ENST00000554499 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
PLEKHG3-208ENST00000554499 TOP2BQ02880 1626 aa23.28■■□□□ 1.32
PLEKHG3-208ENST00000554499 POLA1P09884 1462 aaPredicted RBP23.25■■□□□ 1.31
PLEKHG3-208ENST00000554499 SYNJ1O43426 1573 aa23.25■■□□□ 1.31
PLEKHG3-208ENST00000554499 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
PLEKHG3-208ENST00000554499 IFT140Q96RY7 1462 aa23.23■■□□□ 1.31
PLEKHG3-208ENST00000554499 TARBP1Q13395 1621 aaKnown RBP23.19■■□□□ 1.3
PLEKHG3-208ENST00000554499 SOGA1O94964 1423 aa23.16■■□□□ 1.3
PLEKHG3-208ENST00000554499 RAD54L2Q9Y4B4 1467 aa23.11■■□□□ 1.29
PLEKHG3-208ENST00000554499 WDR97A6NE52 1622 aa23.09■■□□□ 1.29
PLEKHG3-208ENST00000554499 ABCA10Q8WWZ4 1543 aa23.05■■□□□ 1.28
PLEKHG3-208ENST00000554499 ZNF608Q9ULD9 1512 aaPredicted RBP23.05■■□□□ 1.28
PLEKHG3-208ENST00000554499 EIF4G3O43432 1585 aaKnown RBP23.01■■□□□ 1.27
PLEKHG3-208ENST00000554499 TRIM41Q8WV44 630 aa22.97■■□□□ 1.27
PLEKHG3-208ENST00000554499 AQRO60306 1485 aaKnown RBP eCLIP22.97■■□□□ 1.27
PLEKHG3-208ENST00000554499 TDRD9Q8NDG6 1382 aaKnown RBP22.96■■□□□ 1.27
PLEKHG3-208ENST00000554499 ABCA5Q8WWZ7 1642 aa22.94■■□□□ 1.26
PLEKHG3-208ENST00000554499 GAPVD1Q14C86 1478 aa22.91■■□□□ 1.26
PLEKHG3-208ENST00000554499 PBRM1Q86U86 1689 aa22.89■■□□□ 1.25
PLEKHG3-208ENST00000554499 GRIN2BQ13224 1484 aa22.87■■□□□ 1.25
PLEKHG3-208ENST00000554499 CHIC1Q5VXU3 224 aa22.87■■□□□ 1.25
PLEKHG3-208ENST00000554499 KIF27Q86VH2 1401 aa22.82■■□□□ 1.24
PLEKHG3-208ENST00000554499 ERICH3Q5RHP9 1530 aa22.8■■□□□ 1.24
PLEKHG3-208ENST00000554499 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
PLEKHG3-208ENST00000554499 SNAPC4Q5SXM2 1469 aa22.77■■□□□ 1.24
PLEKHG3-208ENST00000554499 CHD1O14646 1710 aa22.71■■□□□ 1.23
PLEKHG3-208ENST00000554499 SYNJ2O15056 1496 aa22.69■■□□□ 1.22
PLEKHG3-208ENST00000554499 ADAMTS12P58397 1594 aa22.68■■□□□ 1.22
PLEKHG3-208ENST00000554499 IGF1RP08069 1367 aa22.68■■□□□ 1.22
PLEKHG3-208ENST00000554499 CUL7Q14999 1698 aa22.68■■□□□ 1.22
PLEKHG3-208ENST00000554499 RUSC2Q8N2Y8 1516 aa22.67■■□□□ 1.22
PLEKHG3-208ENST00000554499 FHAD1B1AJZ9 1412 aa22.66■■□□□ 1.22
PLEKHG3-208ENST00000554499 CHMP7Q8WUX9 453 aaPredicted RBP22.63■■□□□ 1.21
PLEKHG3-208ENST00000554499 EEA1Q15075 1411 aa22.63■■□□□ 1.21
PLEKHG3-208ENST00000554499 FBLN2P98095 1184 aa22.61■■□□□ 1.21
PLEKHG3-208ENST00000554499 OSCARQ8IYS5 282 aa22.6■■□□□ 1.21
PLEKHG3-208ENST00000554499 GRIN2AQ12879 1464 aa22.57■■□□□ 1.2
PLEKHG3-208ENST00000554499 CARMIL1Q5VZK9 1371 aa22.56■■□□□ 1.2
PLEKHG3-208ENST00000554499 CSRNP3Q8WYN3 585 aa22.51■■□□□ 1.19
PLEKHG3-208ENST00000554499 RAPGEF2Q9Y4G8 1499 aa22.47■■□□□ 1.19
PLEKHG3-208ENST00000554499 NUP160Q12769 1436 aa22.47■■□□□ 1.19
PLEKHG3-208ENST00000554499 PRXQ9BXM0 1461 aa22.47■■□□□ 1.19
PLEKHG3-208ENST00000554499 CEP170Q5SW79 1584 aa22.44■■□□□ 1.18
PLEKHG3-208ENST00000554499 DNAJC5Q9H3Z4 198 aa22.44■■□□□ 1.18
PLEKHG3-208ENST00000554499 CLASP1Q7Z460 1538 aa22.43■■□□□ 1.18
PLEKHG3-208ENST00000554499 FAM9AQ8IZU1 332 aaPredicted RBP22.41■■□□□ 1.18
PLEKHG3-208ENST00000554499 KIF21BO75037 1637 aa22.36■■□□□ 1.17
PLEKHG3-208ENST00000554499 KIAA0586Q9BVV6 1533 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms