RNA–Protein interactions for RNA: ENST00000554035.5

RDH11-206, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-206ENST00000554035 NISCHQ9Y2I1 1504 aa20.53■□□□□ 0.88
RDH11-206ENST00000554035 AEBP2Q6ZN18 517 aaPredicted RBP20.49■□□□□ 0.87
RDH11-206ENST00000554035 CHIC1Q5VXU3 224 aa19.41■□□□□ 0.7
RDH11-206ENST00000554035 CCDC180Q9P1Z9 1646 aa17.98■□□□□ 0.47
RDH11-206ENST00000554035 SENP3Q9H4L4 574 aaPredicted RBP17.56■□□□□ 0.4
RDH11-206ENST00000554035 PHF23Q9BUL5 403 aaPredicted RBP17.31■□□□□ 0.36
RDH11-206ENST00000554035 ZCCHC6Q5VYS8 1495 aaKnown RBP17.23■□□□□ 0.35
RDH11-206ENST00000554035 DCAF1Q9Y4B6 1507 aa17.05■□□□□ 0.32
RDH11-206ENST00000554035 ABCC9O60706 1549 aa16.96■□□□□ 0.3
RDH11-206ENST00000554035 MYO15BQ96JP2 1530 aa16.91■□□□□ 0.3
RDH11-206ENST00000554035 DCAF8L2P0C7V8 631 aa16.8■□□□□ 0.28
RDH11-206ENST00000554035 NACADO15069 1562 aa16.77■□□□□ 0.27
RDH11-206ENST00000554035 RB1CC1Q8TDY2 1594 aa16.62■□□□□ 0.25
RDH11-206ENST00000554035 SHROOM4Q9ULL8 1493 aa16.51■□□□□ 0.23
RDH11-206ENST00000554035 SCRIBQ14160 1630 aa16.41■□□□□ 0.22
RDH11-206ENST00000554035 FOXD1Q16676 465 aa16.34■□□□□ 0.21
RDH11-206ENST00000554035 UNC13AQ9UPW8 1703 aa16.22■□□□□ 0.19
RDH11-206ENST00000554035 BICRAQ9NZM4 1560 aa16.1■□□□□ 0.17
RDH11-206ENST00000554035 PABPN1Q86U42 306 aaKnown RBP eCLIP15.94■□□□□ 0.14
RDH11-206ENST00000554035 CECR2Q9BXF3 1484 aa15.9■□□□□ 0.14
RDH11-206ENST00000554035 BAZ1AQ9NRL2 1556 aaPredicted RBP15.87■□□□□ 0.13
RDH11-206ENST00000554035 RSF1Q96T23 1441 aaPredicted RBP15.86■□□□□ 0.13
RDH11-206ENST00000554035 SUPT5HO00267 1087 aaKnown RBP15.85■□□□□ 0.13
RDH11-206ENST00000554035 MROH2BQ7Z745 1585 aa15.82■□□□□ 0.12
RDH11-206ENST00000554035 SMARCA4P51532 1647 aa15.79■□□□□ 0.12
RDH11-206ENST00000554035 WIZO95785 1651 aa15.66■□□□□ 0.1
RDH11-206ENST00000554035 PEG3Q9GZU2 1588 aa15.65■□□□□ 0.1
RDH11-206ENST00000554035 EIF4G1Q04637 1599 aaKnown RBP15.62■□□□□ 0.09
RDH11-206ENST00000554035 SMARCA2P51531 1590 aa15.57■□□□□ 0.08
RDH11-206ENST00000554035 TOP2AP11388 1531 aaKnown RBP15.56■□□□□ 0.08
RDH11-206ENST00000554035 ATAD2BQ9ULI0 1458 aa15.55■□□□□ 0.08
RDH11-206ENST00000554035 PLPPR3Q6T4P5 718 aa15.48■□□□□ 0.07
RDH11-206ENST00000554035 NCAPD3P42695 1498 aa15.46■□□□□ 0.07
RDH11-206ENST00000554035 HMGXB3Q12766 1538 aa15.44■□□□□ 0.06
RDH11-206ENST00000554035 BAZ1BQ9UIG0 1483 aaKnown RBP15.44■□□□□ 0.06
RDH11-206ENST00000554035 MSH5O43196 834 aa15.39■□□□□ 0.05
RDH11-206ENST00000554035 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
RDH11-206ENST00000554035 CCDC88BA6NC98 1476 aa15.36■□□□□ 0.05
RDH11-206ENST00000554035 PIAS4Q8N2W9 510 aaPredicted RBP15.25■□□□□ 0.03
RDH11-206ENST00000554035 PPP6R1Q9UPN7 881 aa15.19■□□□□ 0.02
RDH11-206ENST00000554035 POTEDQ86YR6 584 aa15.15■□□□□ 0.02
RDH11-206ENST00000554035 ADRA2BP18089 450 aa15.13■□□□□ 0.01
RDH11-206ENST00000554035 CFTRP13569 1480 aa15.08■□□□□ 0.01
RDH11-206ENST00000554035 CADPSQ9ULU8 1353 aa15.04■□□□□ -0
RDH11-206ENST00000554035 DNAJC5BQ9UF47 199 aa15.03■□□□□ -0
RDH11-206ENST00000554035 PRDM2Q13029 1718 aa15□□□□□ -0.01
RDH11-206ENST00000554035 TRIM41Q8WV44 630 aa14.96□□□□□ -0.01
RDH11-206ENST00000554035 ABCC8Q09428 1581 aa14.95□□□□□ -0.02
RDH11-206ENST00000554035 LAMC3Q9Y6N6 1575 aa14.95□□□□□ -0.02
RDH11-206ENST00000554035 WRNQ14191 1432 aaPredicted RBP eCLIP14.93□□□□□ -0.02
RDH11-206ENST00000554035 NESP48681 1621 aa14.86□□□□□ -0.03
RDH11-206ENST00000554035 SYNJ1O43426 1573 aa14.85□□□□□ -0.03
RDH11-206ENST00000554035 FANCD2Q9BXW9 1451 aa14.85□□□□□ -0.03
RDH11-206ENST00000554035 TOP2BQ02880 1626 aa14.84□□□□□ -0.03
RDH11-206ENST00000554035 BIVM-ERCC5R4GMW8 1640 aa14.84□□□□□ -0.03
RDH11-206ENST00000554035 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.04
RDH11-206ENST00000554035 CUX1P39880 1505 aa14.8□□□□□ -0.04
RDH11-206ENST00000554035 CEP164Q9UPV0 1460 aa14.77□□□□□ -0.04
RDH11-206ENST00000554035 EEA1Q15075 1411 aa14.74□□□□□ -0.05
RDH11-206ENST00000554035 DNMBPQ6XZF7 1577 aa14.73□□□□□ -0.05
RDH11-206ENST00000554035 KIF21AQ7Z4S6 1674 aa14.7□□□□□ -0.06
RDH11-206ENST00000554035 TOPBP1Q92547 1522 aa14.69□□□□□ -0.06
RDH11-206ENST00000554035 URB2Q14146 1524 aaKnown RBP14.67□□□□□ -0.06
RDH11-206ENST00000554035 SOGA1O94964 1423 aa14.66□□□□□ -0.06
RDH11-206ENST00000554035 FGD5Q6ZNL6 1462 aa14.64□□□□□ -0.07
RDH11-206ENST00000554035 MRC2Q9UBG0 1479 aa14.63□□□□□ -0.07
RDH11-206ENST00000554035 FAM9AQ8IZU1 332 aaPredicted RBP14.61□□□□□ -0.07
RDH11-206ENST00000554035 RUSC2Q8N2Y8 1516 aa14.61□□□□□ -0.07
RDH11-206ENST00000554035 POLA1P09884 1462 aaPredicted RBP14.6□□□□□ -0.07
RDH11-206ENST00000554035 CSRNP3Q8WYN3 585 aa14.59□□□□□ -0.07
RDH11-206ENST00000554035 KIF27Q86VH2 1401 aa14.58□□□□□ -0.08
RDH11-206ENST00000554035 ERCC6Q03468 1493 aa14.57□□□□□ -0.08
RDH11-206ENST00000554035 WDR62O43379 1518 aa14.57□□□□□ -0.08
RDH11-206ENST00000554035 ABCA10Q8WWZ4 1543 aa14.56□□□□□ -0.08
RDH11-206ENST00000554035 LOC105371045A0A1W2PR82 267 aa14.55□□□□□ -0.08
RDH11-206ENST00000554035 THOC2Q8NI27 1593 aaKnown RBP14.53□□□□□ -0.08
RDH11-206ENST00000554035 CUX2O14529 1486 aa14.53□□□□□ -0.08
RDH11-206ENST00000554035 KIF21BO75037 1637 aa14.52□□□□□ -0.09
RDH11-206ENST00000554035 RAD54L2Q9Y4B4 1467 aa14.51□□□□□ -0.09
RDH11-206ENST00000554035 WDR97A6NE52 1622 aa14.51□□□□□ -0.09
RDH11-206ENST00000554035 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
RDH11-206ENST00000554035 GOLGA3Q08378 1498 aa14.47□□□□□ -0.09
RDH11-206ENST00000554035 PRXQ9BXM0 1461 aa14.47□□□□□ -0.09
RDH11-206ENST00000554035 IFT140Q96RY7 1462 aa14.45□□□□□ -0.1
RDH11-206ENST00000554035 ERICH3Q5RHP9 1530 aa14.45□□□□□ -0.1
RDH11-206ENST00000554035 IGF1RP08069 1367 aa14.45□□□□□ -0.1
RDH11-206ENST00000554035 ABCA5Q8WWZ7 1642 aa14.44□□□□□ -0.1
RDH11-206ENST00000554035 TNIKQ9UKE5 1360 aa14.42□□□□□ -0.1
RDH11-206ENST00000554035 GAPVD1Q14C86 1478 aa14.39□□□□□ -0.11
RDH11-206ENST00000554035 RAPGEF2Q9Y4G8 1499 aa14.39□□□□□ -0.11
RDH11-206ENST00000554035 CUL7Q14999 1698 aa14.38□□□□□ -0.11
RDH11-206ENST00000554035 TDRD9Q8NDG6 1382 aaKnown RBP14.37□□□□□ -0.11
RDH11-206ENST00000554035 CARMIL1Q5VZK9 1371 aa14.36□□□□□ -0.11
RDH11-206ENST00000554035 UBTFP17480 764 aaKnown RBP14.33□□□□□ -0.12
RDH11-206ENST00000554035 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
RDH11-206ENST00000554035 GRIN2BQ13224 1484 aa14.31□□□□□ -0.12
RDH11-206ENST00000554035 PBRM1Q86U86 1689 aa14.31□□□□□ -0.12
RDH11-206ENST00000554035 ZNF608Q9ULD9 1512 aaPredicted RBP14.31□□□□□ -0.12
RDH11-206ENST00000554035 CEP162Q5TB80 1403 aa14.3□□□□□ -0.12
RDH11-206ENST00000554035 AQRO60306 1485 aaKnown RBP eCLIP14.3□□□□□ -0.122e-6■□□□□ 9.2
Retrieved 100 of 20,778 RNA–protein pairs in 428.3 ms