RNA–Protein interactions for RNA: ENST00000553891.5

ZFYVE1-203, Transcript of zinc finger FYVE-type containing 1, humanhuman

TSL 5 BASIC

Gene ZFYVE1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1-203ENST00000553891 NISCHQ9Y2I1 1504 aa23.02■■□□□ 1.28
ZFYVE1-203ENST00000553891 CCDC180Q9P1Z9 1646 aa20.63■□□□□ 0.89
ZFYVE1-203ENST00000553891 ABCC9O60706 1549 aa19.46■□□□□ 0.71
ZFYVE1-203ENST00000553891 MYO15BQ96JP2 1530 aa19.45■□□□□ 0.7
ZFYVE1-203ENST00000553891 DCAF1Q9Y4B6 1507 aa19.36■□□□□ 0.69
ZFYVE1-203ENST00000553891 NACADO15069 1562 aa19.29■□□□□ 0.68
ZFYVE1-203ENST00000553891 ZCCHC6Q5VYS8 1495 aaKnown RBP19.26■□□□□ 0.67
ZFYVE1-203ENST00000553891 RB1CC1Q8TDY2 1594 aa19.18■□□□□ 0.66
ZFYVE1-203ENST00000553891 SHROOM4Q9ULL8 1493 aa18.76■□□□□ 0.59
ZFYVE1-203ENST00000553891 DNAJC5BQ9UF47 199 aa18.71■□□□□ 0.59
ZFYVE1-203ENST00000553891 UNC13AQ9UPW8 1703 aa18.64■□□□□ 0.57
ZFYVE1-203ENST00000553891 BICRAQ9NZM4 1560 aa18.51■□□□□ 0.55
ZFYVE1-203ENST00000553891 DCAF8L2P0C7V8 631 aa18.5■□□□□ 0.55
ZFYVE1-203ENST00000553891 SCRIBQ14160 1630 aa18.39■□□□□ 0.53
ZFYVE1-203ENST00000553891 DNAJC5Q9H3Z4 198 aa18.34■□□□□ 0.53
ZFYVE1-203ENST00000553891 HRCP23327 699 aa18.25■□□□□ 0.51
ZFYVE1-203ENST00000553891 SUPT5HO00267 1087 aaKnown RBP18.13■□□□□ 0.49
ZFYVE1-203ENST00000553891 PABPN1Q86U42 306 aaKnown RBP eCLIP18.05■□□□□ 0.48
ZFYVE1-203ENST00000553891 EIF4G1Q04637 1599 aaKnown RBP17.98■□□□□ 0.47
ZFYVE1-203ENST00000553891 PPARGC1BQ86YN6 1023 aaKnown RBP17.96■□□□□ 0.47
ZFYVE1-203ENST00000553891 PCGF6Q9BYE7 350 aa17.95■□□□□ 0.46
ZFYVE1-203ENST00000553891 BAZ1AQ9NRL2 1556 aaPredicted RBP17.88■□□□□ 0.45
ZFYVE1-203ENST00000553891 PEG3Q9GZU2 1588 aa17.86■□□□□ 0.45
ZFYVE1-203ENST00000553891 CUX2O14529 1486 aa17.83■□□□□ 0.44
ZFYVE1-203ENST00000553891 SMARCA4P51532 1647 aa17.82■□□□□ 0.44
ZFYVE1-203ENST00000553891 CC2D2AQ9P2K1 1620 aa17.81■□□□□ 0.44
ZFYVE1-203ENST00000553891 CHIC1Q5VXU3 224 aa17.79■□□□□ 0.44
ZFYVE1-203ENST00000553891 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
ZFYVE1-203ENST00000553891 NCAPD3P42695 1498 aa17.74■□□□□ 0.43
ZFYVE1-203ENST00000553891 HMGXB3Q12766 1538 aa17.73■□□□□ 0.43
ZFYVE1-203ENST00000553891 CECR2Q9BXF3 1484 aa17.68■□□□□ 0.42
ZFYVE1-203ENST00000553891 ATAD2BQ9ULI0 1458 aa17.65■□□□□ 0.42
ZFYVE1-203ENST00000553891 MROH2BQ7Z745 1585 aa17.6■□□□□ 0.41
ZFYVE1-203ENST00000553891 RSF1Q96T23 1441 aaPredicted RBP17.5■□□□□ 0.39
ZFYVE1-203ENST00000553891 BAZ1BQ9UIG0 1483 aaKnown RBP17.47■□□□□ 0.39
ZFYVE1-203ENST00000553891 PELP1Q8IZL8 1130 aaKnown RBP17.43■□□□□ 0.38
ZFYVE1-203ENST00000553891 LOC105371045A0A1W2PR82 267 aa17.42■□□□□ 0.38
ZFYVE1-203ENST00000553891 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
ZFYVE1-203ENST00000553891 WIZO95785 1651 aa17.38■□□□□ 0.37
ZFYVE1-203ENST00000553891 TRIM26Q12899 539 aaPredicted RBP17.32■□□□□ 0.36
ZFYVE1-203ENST00000553891 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
ZFYVE1-203ENST00000553891 LAMC3Q9Y6N6 1575 aa17.26■□□□□ 0.35
ZFYVE1-203ENST00000553891 PRDM2Q13029 1718 aa17.13■□□□□ 0.33
ZFYVE1-203ENST00000553891 ZEB1P37275 1124 aaPredicted RBP17.11■□□□□ 0.33
ZFYVE1-203ENST00000553891 CFTRP13569 1480 aa17.11■□□□□ 0.33
ZFYVE1-203ENST00000553891 CADPSQ9ULU8 1353 aa17.11■□□□□ 0.33
ZFYVE1-203ENST00000553891 CCDC88BA6NC98 1476 aa17.06■□□□□ 0.32
ZFYVE1-203ENST00000553891 PDS5BQ9NTI5 1447 aa17.04■□□□□ 0.32
ZFYVE1-203ENST00000553891 THOC2Q8NI27 1593 aaKnown RBP17.04■□□□□ 0.32
ZFYVE1-203ENST00000553891 NESP48681 1621 aa16.89■□□□□ 0.29
ZFYVE1-203ENST00000553891 ABCC8Q09428 1581 aa16.88■□□□□ 0.29
ZFYVE1-203ENST00000553891 KIF21AQ7Z4S6 1674 aa16.86■□□□□ 0.29
ZFYVE1-203ENST00000553891 WDR62O43379 1518 aa16.86■□□□□ 0.29
ZFYVE1-203ENST00000553891 FANCD2Q9BXW9 1451 aa16.85■□□□□ 0.29
ZFYVE1-203ENST00000553891 CEP164Q9UPV0 1460 aa16.85■□□□□ 0.29
ZFYVE1-203ENST00000553891 MRC2Q9UBG0 1479 aa16.85■□□□□ 0.29
ZFYVE1-203ENST00000553891 ERCC6Q03468 1493 aa16.84■□□□□ 0.29
ZFYVE1-203ENST00000553891 ACIN1Q9UKV3 1341 aaKnown RBP16.83■□□□□ 0.28
ZFYVE1-203ENST00000553891 NEUROD1Q13562 356 aa16.82■□□□□ 0.28
ZFYVE1-203ENST00000553891 FAM9AQ8IZU1 332 aaPredicted RBP16.78■□□□□ 0.28
ZFYVE1-203ENST00000553891 EHMT2Q96KQ7 1210 aa16.76■□□□□ 0.27
ZFYVE1-203ENST00000553891 DNMBPQ6XZF7 1577 aa16.73■□□□□ 0.27
ZFYVE1-203ENST00000553891 TRIM41Q8WV44 630 aa16.72■□□□□ 0.27
ZFYVE1-203ENST00000553891 GTF3C3Q9Y5Q9 886 aa16.72■□□□□ 0.27
ZFYVE1-203ENST00000553891 WDR97A6NE52 1622 aa16.72■□□□□ 0.27
ZFYVE1-203ENST00000553891 MYT1Q01538 1121 aa16.69■□□□□ 0.26
ZFYVE1-203ENST00000553891 URB2Q14146 1524 aaKnown RBP16.67■□□□□ 0.26
ZFYVE1-203ENST00000553891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.66■□□□□ 0.26
ZFYVE1-203ENST00000553891 TOPBP1Q92547 1522 aa16.64■□□□□ 0.25
ZFYVE1-203ENST00000553891 BIVM-ERCC5R4GMW8 1640 aa16.62■□□□□ 0.25
ZFYVE1-203ENST00000553891 CCER1Q8TC90 406 aaPredicted RBP16.59■□□□□ 0.25
ZFYVE1-203ENST00000553891 IFT140Q96RY7 1462 aa16.59■□□□□ 0.25
ZFYVE1-203ENST00000553891 CENPBP07199 599 aaPredicted RBP16.58■□□□□ 0.25
ZFYVE1-203ENST00000553891 DIEXFQ68CQ4 756 aaKnown RBP16.58■□□□□ 0.24
ZFYVE1-203ENST00000553891 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
ZFYVE1-203ENST00000553891 CUX1P39880 1505 aa16.54■□□□□ 0.24
ZFYVE1-203ENST00000553891 TARBP1Q13395 1621 aaKnown RBP16.51■□□□□ 0.23
ZFYVE1-203ENST00000553891 WRNQ14191 1432 aaPredicted RBP eCLIP16.48■□□□□ 0.23
ZFYVE1-203ENST00000553891 POLA1P09884 1462 aaPredicted RBP16.47■□□□□ 0.23
ZFYVE1-203ENST00000553891 ABCA10Q8WWZ4 1543 aa16.44■□□□□ 0.22
ZFYVE1-203ENST00000553891 FGD5Q6ZNL6 1462 aa16.42■□□□□ 0.22
ZFYVE1-203ENST00000553891 SYNJ1O43426 1573 aa16.41■□□□□ 0.22
ZFYVE1-203ENST00000553891 RIMBP3CA6NJZ7 1639 aa16.39■□□□□ 0.21
ZFYVE1-203ENST00000553891 RIMBP3BA6NNM3 1639 aa16.39■□□□□ 0.21
ZFYVE1-203ENST00000553891 RIMBP3Q9UFD9 1639 aa16.39■□□□□ 0.21
ZFYVE1-203ENST00000553891 SOGA1O94964 1423 aa16.37■□□□□ 0.21
ZFYVE1-203ENST00000553891 YTHDC1Q96MU7 727 aaKnown RBP16.36■□□□□ 0.21
ZFYVE1-203ENST00000553891 ABCA5Q8WWZ7 1642 aa16.36■□□□□ 0.21
ZFYVE1-203ENST00000553891 TTBK1Q5TCY1 1321 aaPredicted RBP16.35■□□□□ 0.21
ZFYVE1-203ENST00000553891 EIF4G3O43432 1585 aaKnown RBP16.33■□□□□ 0.21
ZFYVE1-203ENST00000553891 ERICH3Q5RHP9 1530 aa16.29■□□□□ 0.2
ZFYVE1-203ENST00000553891 MAGI1Q96QZ7 1491 aaPredicted RBP16.29■□□□□ 0.2
ZFYVE1-203ENST00000553891 GRIN2BQ13224 1484 aa16.28■□□□□ 0.2
ZFYVE1-203ENST00000553891 ZNF316A6NFI3 1004 aaPredicted RBP16.26■□□□□ 0.19
ZFYVE1-203ENST00000553891 PBRM1Q86U86 1689 aa16.25■□□□□ 0.19
ZFYVE1-203ENST00000553891 RAD54L2Q9Y4B4 1467 aa16.24■□□□□ 0.19
ZFYVE1-203ENST00000553891 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
ZFYVE1-203ENST00000553891 GAPVD1Q14C86 1478 aa16.23■□□□□ 0.19
ZFYVE1-203ENST00000553891 MIER1Q8N108 512 aa16.19■□□□□ 0.18
ZFYVE1-203ENST00000553891 CUL7Q14999 1698 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms