RNA–Protein interactions for RNA: ENST00000553835.5

PSMC1-203, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 3

Gene PSMC1, Length 390 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-203ENST00000553835 NISCHQ9Y2I1 1504 aa23.98■■□□□ 1.43
PSMC1-203ENST00000553835 ABCC9O60706 1549 aa23.31■■□□□ 1.32
PSMC1-203ENST00000553835 DNAJC5BQ9UF47 199 aa23.24■■□□□ 1.31
PSMC1-203ENST00000553835 DNAJC5Q9H3Z4 198 aa22.34■■□□□ 1.17
PSMC1-203ENST00000553835 CCDC180Q9P1Z9 1646 aa22.07■■□□□ 1.12
PSMC1-203ENST00000553835 RB1CC1Q8TDY2 1594 aa21.64■■□□□ 1.05
PSMC1-203ENST00000553835 PABPN1Q86U42 306 aaKnown RBP eCLIP21.48■■□□□ 1.03
PSMC1-203ENST00000553835 NACADO15069 1562 aa21.23■□□□□ 0.99
PSMC1-203ENST00000553835 CECR2Q9BXF3 1484 aa21.2■□□□□ 0.98
PSMC1-203ENST00000553835 BICRAQ9NZM4 1560 aa21.16■□□□□ 0.98
PSMC1-203ENST00000553835 UNC13AQ9UPW8 1703 aa21.1■□□□□ 0.97
PSMC1-203ENST00000553835 CC2D2AQ9P2K1 1620 aa21.04■□□□□ 0.96
PSMC1-203ENST00000553835 SHROOM4Q9ULL8 1493 aa20.79■□□□□ 0.92
PSMC1-203ENST00000553835 CUX2O14529 1486 aa20.76■□□□□ 0.91
PSMC1-203ENST00000553835 EIF4G1Q04637 1599 aaKnown RBP20.68■□□□□ 0.9
PSMC1-203ENST00000553835 MYO15BQ96JP2 1530 aa20.62■□□□□ 0.89
PSMC1-203ENST00000553835 DCAF8L2P0C7V8 631 aa20.55■□□□□ 0.88
PSMC1-203ENST00000553835 TRIM41Q8WV44 630 aa20.54■□□□□ 0.88
PSMC1-203ENST00000553835 ERCC6Q03468 1493 aa20.18■□□□□ 0.82
PSMC1-203ENST00000553835 SCRIBQ14160 1630 aa19.97■□□□□ 0.79
PSMC1-203ENST00000553835 DCAF1Q9Y4B6 1507 aa19.81■□□□□ 0.76
PSMC1-203ENST00000553835 THOC2Q8NI27 1593 aaKnown RBP19.79■□□□□ 0.76
PSMC1-203ENST00000553835 NCAPD3P42695 1498 aa19.69■□□□□ 0.74
PSMC1-203ENST00000553835 NESP48681 1621 aa19.67■□□□□ 0.74
PSMC1-203ENST00000553835 AEBP2Q6ZN18 517 aaPredicted RBP19.66■□□□□ 0.74
PSMC1-203ENST00000553835 ZCCHC6Q5VYS8 1495 aaKnown RBP19.6■□□□□ 0.73
PSMC1-203ENST00000553835 OSCARQ8IYS5 282 aa19.53■□□□□ 0.72
PSMC1-203ENST00000553835 BAZ1AQ9NRL2 1556 aaPredicted RBP19.46■□□□□ 0.71
PSMC1-203ENST00000553835 SMARCA2P51531 1590 aa19.4■□□□□ 0.7
PSMC1-203ENST00000553835 RIMBP3CA6NJZ7 1639 aa19.4■□□□□ 0.7
PSMC1-203ENST00000553835 RIMBP3BA6NNM3 1639 aa19.4■□□□□ 0.7
PSMC1-203ENST00000553835 RIMBP3Q9UFD9 1639 aa19.4■□□□□ 0.7
PSMC1-203ENST00000553835 ATAD2BQ9ULI0 1458 aa19.37■□□□□ 0.69
PSMC1-203ENST00000553835 LAMC3Q9Y6N6 1575 aa19.36■□□□□ 0.69
PSMC1-203ENST00000553835 HMGXB3Q12766 1538 aa19.35■□□□□ 0.69
PSMC1-203ENST00000553835 KIF21AQ7Z4S6 1674 aa19.31■□□□□ 0.68
PSMC1-203ENST00000553835 PDS5BQ9NTI5 1447 aa19.29■□□□□ 0.68
PSMC1-203ENST00000553835 ILDR1Q86SU0 546 aaPredicted RBP19.24■□□□□ 0.67
PSMC1-203ENST00000553835 WDR62O43379 1518 aa19.24■□□□□ 0.67
PSMC1-203ENST00000553835 TRHP20396 242 aaPredicted RBP19.23■□□□□ 0.67
PSMC1-203ENST00000553835 ARHGEF11O15085 1522 aa19.23■□□□□ 0.67
PSMC1-203ENST00000553835 MRC2Q9UBG0 1479 aa19.19■□□□□ 0.66
PSMC1-203ENST00000553835 CYB5RLQ6IPT4 315 aa19.11■□□□□ 0.65
PSMC1-203ENST00000553835 BAZ1BQ9UIG0 1483 aaKnown RBP19.01■□□□□ 0.63
PSMC1-203ENST00000553835 ARAP1Q96P48 1450 aa18.97■□□□□ 0.63
PSMC1-203ENST00000553835 CADPSQ9ULU8 1353 aa18.95■□□□□ 0.62
PSMC1-203ENST00000553835 SMARCA4P51532 1647 aa18.94■□□□□ 0.62
PSMC1-203ENST00000553835 PEG3Q9GZU2 1588 aa18.89■□□□□ 0.62
PSMC1-203ENST00000553835 CEP164Q9UPV0 1460 aa18.8■□□□□ 0.6
PSMC1-203ENST00000553835 RSF1Q96T23 1441 aaPredicted RBP18.75■□□□□ 0.59
PSMC1-203ENST00000553835 FANCD2Q9BXW9 1451 aa18.69■□□□□ 0.58
PSMC1-203ENST00000553835 URB2Q14146 1524 aaKnown RBP18.65■□□□□ 0.58
PSMC1-203ENST00000553835 ZNF608Q9ULD9 1512 aaPredicted RBP18.63■□□□□ 0.57
PSMC1-203ENST00000553835 IFT140Q96RY7 1462 aa18.53■□□□□ 0.56
PSMC1-203ENST00000553835 CFTRP13569 1480 aa18.49■□□□□ 0.55
PSMC1-203ENST00000553835 KDM4FA0A1W2PPD8 638 aa18.48■□□□□ 0.55
PSMC1-203ENST00000553835 CHD1O14646 1710 aa18.47■□□□□ 0.55
PSMC1-203ENST00000553835 MROH2BQ7Z745 1585 aa18.42■□□□□ 0.54
PSMC1-203ENST00000553835 EIF4G3O43432 1585 aaKnown RBP18.4■□□□□ 0.54
PSMC1-203ENST00000553835 CLASP1Q7Z460 1538 aa18.38■□□□□ 0.53
PSMC1-203ENST00000553835 FBXO41Q8TF61 875 aa18.27■□□□□ 0.52
PSMC1-203ENST00000553835 AQRO60306 1485 aaKnown RBP eCLIP18.26■□□□□ 0.512e-6■■□□□ 14.2
PSMC1-203ENST00000553835 FBLN2P98095 1184 aa18.26■□□□□ 0.51
PSMC1-203ENST00000553835 ERCC6L2Q5T890 1561 aa18.25■□□□□ 0.51
PSMC1-203ENST00000553835 GAPVD1Q14C86 1478 aa18.23■□□□□ 0.51
PSMC1-203ENST00000553835 TOPBP1Q92547 1522 aa18.2■□□□□ 0.5
PSMC1-203ENST00000553835 TARBP1Q13395 1621 aaKnown RBP18.16■□□□□ 0.5
PSMC1-203ENST00000553835 KIF13AQ9H1H9 1805 aa18.15■□□□□ 0.5
PSMC1-203ENST00000553835 LMTK3Q96Q04 1460 aa18.14■□□□□ 0.5
PSMC1-203ENST00000553835 SYNJ1O43426 1573 aa18.14■□□□□ 0.49
PSMC1-203ENST00000553835 SOCS7O14512 581 aa18.12■□□□□ 0.49
PSMC1-203ENST00000553835 HECW2Q9P2P5 1572 aa18.12■□□□□ 0.49
PSMC1-203ENST00000553835 ABCC8Q09428 1581 aa18.08■□□□□ 0.49
PSMC1-203ENST00000553835 WIZO95785 1651 aa18.06■□□□□ 0.48
PSMC1-203ENST00000553835 PRDM2Q13029 1718 aa18.03■□□□□ 0.48
PSMC1-203ENST00000553835 SNAPC4Q5SXM2 1469 aa18.01■□□□□ 0.47
PSMC1-203ENST00000553835 CHMP7Q8WUX9 453 aaPredicted RBP18■□□□□ 0.47
PSMC1-203ENST00000553835 DNMBPQ6XZF7 1577 aa17.99■□□□□ 0.47
PSMC1-203ENST00000553835 MAGI1Q96QZ7 1491 aaPredicted RBP17.97■□□□□ 0.47
PSMC1-203ENST00000553835 ILDR2Q71H61 639 aa17.97■□□□□ 0.47
PSMC1-203ENST00000553835 ABCC10Q5T3U5 1492 aa17.95■□□□□ 0.46
PSMC1-203ENST00000553835 POLA1P09884 1462 aaPredicted RBP17.94■□□□□ 0.46
PSMC1-203ENST00000553835 KDM6BO15054 1643 aa17.94■□□□□ 0.46
PSMC1-203ENST00000553835 SYNJ2O15056 1496 aa17.93■□□□□ 0.46
PSMC1-203ENST00000553835 ADGRL1O94910 1474 aa17.93■□□□□ 0.46
PSMC1-203ENST00000553835 TDRD9Q8NDG6 1382 aaKnown RBP17.92■□□□□ 0.46
PSMC1-203ENST00000553835 WDR97A6NE52 1622 aa17.9■□□□□ 0.46
PSMC1-203ENST00000553835 FAM69CQ0P6D2 419 aa17.89■□□□□ 0.45
PSMC1-203ENST00000553835 RAD54L2Q9Y4B4 1467 aa17.85■□□□□ 0.45
PSMC1-203ENST00000553835 DIP2BQ9P265 1576 aa17.81■□□□□ 0.44
PSMC1-203ENST00000553835 GRIN2BQ13224 1484 aa17.81■□□□□ 0.44
PSMC1-203ENST00000553835 TOP2AP11388 1531 aaKnown RBP17.8■□□□□ 0.44
PSMC1-203ENST00000553835 SOGA1O94964 1423 aa17.8■□□□□ 0.44
PSMC1-203ENST00000553835 MAPKBP1O60336 1514 aa17.78■□□□□ 0.44
PSMC1-203ENST00000553835 CEP170Q5SW79 1584 aa17.76■□□□□ 0.43
PSMC1-203ENST00000553835 DISP3Q9P2K9 1392 aa17.71■□□□□ 0.43
PSMC1-203ENST00000553835 SHROOM2Q13796 1616 aa17.7■□□□□ 0.42
PSMC1-203ENST00000553835 NUP160Q12769 1436 aa17.65■□□□□ 0.42
PSMC1-203ENST00000553835 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
PSMC1-203ENST00000553835 GRIN2AQ12879 1464 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms