RNA–Protein interactions for RNA: ENST00000553834.1

DEGS2-202, Transcript of delta 4-desaturase, sphingolipid 2, humanhuman

TSL 3 BASIC

Gene DEGS2, Length 421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEGS2-202ENST00000553834 NISCHQ9Y2I1 1504 aa30.44■■■□□ 2.46
DEGS2-202ENST00000553834 CCDC180Q9P1Z9 1646 aa27.01■■□□□ 1.92
DEGS2-202ENST00000553834 ABCC9O60706 1549 aa26.13■■□□□ 1.77
DEGS2-202ENST00000553834 ZCCHC6Q5VYS8 1495 aaKnown RBP25.4■■□□□ 1.66
DEGS2-202ENST00000553834 NACADO15069 1562 aa25.34■■□□□ 1.65
DEGS2-202ENST00000553834 RB1CC1Q8TDY2 1594 aa25.3■■□□□ 1.64
DEGS2-202ENST00000553834 MYO15BQ96JP2 1530 aa25.29■■□□□ 1.64
DEGS2-202ENST00000553834 DCAF8L2P0C7V8 631 aa25.26■■□□□ 1.63
DEGS2-202ENST00000553834 DCAF1Q9Y4B6 1507 aa25.25■■□□□ 1.63
DEGS2-202ENST00000553834 UNC13AQ9UPW8 1703 aa24.74■■□□□ 1.55
DEGS2-202ENST00000553834 SCRIBQ14160 1630 aa24.58■■□□□ 1.53
DEGS2-202ENST00000553834 BICRAQ9NZM4 1560 aa24.5■■□□□ 1.51
DEGS2-202ENST00000553834 PABPN1Q86U42 306 aaKnown RBP eCLIP24.43■■□□□ 1.5
DEGS2-202ENST00000553834 DNAJC5BQ9UF47 199 aa24.4■■□□□ 1.5
DEGS2-202ENST00000553834 SHROOM4Q9ULL8 1493 aa24.33■■□□□ 1.49
DEGS2-202ENST00000553834 EIF4G1Q04637 1599 aaKnown RBP23.84■■□□□ 1.41
DEGS2-202ENST00000553834 CC2D2AQ9P2K1 1620 aa23.69■■□□□ 1.38
DEGS2-202ENST00000553834 CECR2Q9BXF3 1484 aa23.64■■□□□ 1.38
DEGS2-202ENST00000553834 BAZ1AQ9NRL2 1556 aaPredicted RBP23.59■■□□□ 1.37
DEGS2-202ENST00000553834 SMARCA4P51532 1647 aa23.58■■□□□ 1.36
DEGS2-202ENST00000553834 MROH2BQ7Z745 1585 aa23.44■■□□□ 1.34
DEGS2-202ENST00000553834 SMARCA2P51531 1590 aa23.4■■□□□ 1.34
DEGS2-202ENST00000553834 ATAD2BQ9ULI0 1458 aa23.38■■□□□ 1.33
DEGS2-202ENST00000553834 PEG3Q9GZU2 1588 aa23.38■■□□□ 1.33
DEGS2-202ENST00000553834 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
DEGS2-202ENST00000553834 HMGXB3Q12766 1538 aa23.28■■□□□ 1.32
DEGS2-202ENST00000553834 RSF1Q96T23 1441 aaPredicted RBP23.25■■□□□ 1.31
DEGS2-202ENST00000553834 WIZO95785 1651 aa23.2■■□□□ 1.3
DEGS2-202ENST00000553834 BAZ1BQ9UIG0 1483 aaKnown RBP23.2■■□□□ 1.3
DEGS2-202ENST00000553834 TOP2AP11388 1531 aaKnown RBP22.98■■□□□ 1.27
DEGS2-202ENST00000553834 DNAJC5Q9H3Z4 198 aa22.79■■□□□ 1.24
DEGS2-202ENST00000553834 SUPT5HO00267 1087 aaKnown RBP22.75■■□□□ 1.23
DEGS2-202ENST00000553834 LAMC3Q9Y6N6 1575 aa22.72■■□□□ 1.23
DEGS2-202ENST00000553834 CCDC88BA6NC98 1476 aa22.7■■□□□ 1.22
DEGS2-202ENST00000553834 NESP48681 1621 aa22.68■■□□□ 1.22
DEGS2-202ENST00000553834 CADPSQ9ULU8 1353 aa22.67■■□□□ 1.22
DEGS2-202ENST00000553834 CFTRP13569 1480 aa22.6■■□□□ 1.21
DEGS2-202ENST00000553834 PDS5BQ9NTI5 1447 aa22.55■■□□□ 1.2
DEGS2-202ENST00000553834 ERCC6Q03468 1493 aa22.53■■□□□ 1.2
DEGS2-202ENST00000553834 PRDM2Q13029 1718 aa22.49■■□□□ 1.19
DEGS2-202ENST00000553834 KIF21AQ7Z4S6 1674 aa22.46■■□□□ 1.19
DEGS2-202ENST00000553834 CUX2O14529 1486 aa22.41■■□□□ 1.18
DEGS2-202ENST00000553834 FANCD2Q9BXW9 1451 aa22.4■■□□□ 1.18
DEGS2-202ENST00000553834 CEP164Q9UPV0 1460 aa22.35■■□□□ 1.17
DEGS2-202ENST00000553834 THOC2Q8NI27 1593 aaKnown RBP22.33■■□□□ 1.16
DEGS2-202ENST00000553834 MRC2Q9UBG0 1479 aa22.28■■□□□ 1.16
DEGS2-202ENST00000553834 WDR62O43379 1518 aa22.21■■□□□ 1.15
DEGS2-202ENST00000553834 URB2Q14146 1524 aaKnown RBP22.16■■□□□ 1.14
DEGS2-202ENST00000553834 ABCC8Q09428 1581 aa22.13■■□□□ 1.13
DEGS2-202ENST00000553834 DNMBPQ6XZF7 1577 aa22.08■■□□□ 1.13
DEGS2-202ENST00000553834 TOPBP1Q92547 1522 aa22.07■■□□□ 1.12
DEGS2-202ENST00000553834 CUX1P39880 1505 aa21.97■■□□□ 1.11
DEGS2-202ENST00000553834 WRNQ14191 1432 aaPredicted RBP eCLIP21.91■■□□□ 1.1
DEGS2-202ENST00000553834 POLA1P09884 1462 aaPredicted RBP21.9■■□□□ 1.1
DEGS2-202ENST00000553834 IFT140Q96RY7 1462 aa21.9■■□□□ 1.1
DEGS2-202ENST00000553834 BIVM-ERCC5R4GMW8 1640 aa21.88■■□□□ 1.09
DEGS2-202ENST00000553834 TOP2BQ02880 1626 aa21.88■■□□□ 1.09
DEGS2-202ENST00000553834 FGD5Q6ZNL6 1462 aa21.86■■□□□ 1.09
DEGS2-202ENST00000553834 SYNJ1O43426 1573 aa21.85■■□□□ 1.09
DEGS2-202ENST00000553834 TARBP1Q13395 1621 aaKnown RBP21.84■■□□□ 1.09
DEGS2-202ENST00000553834 SOGA1O94964 1423 aa21.81■■□□□ 1.08
DEGS2-202ENST00000553834 RAD54L2Q9Y4B4 1467 aa21.77■■□□□ 1.07
DEGS2-202ENST00000553834 ZNF608Q9ULD9 1512 aaPredicted RBP21.74■■□□□ 1.07
DEGS2-202ENST00000553834 WDR97A6NE52 1622 aa21.73■■□□□ 1.07
DEGS2-202ENST00000553834 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.06
DEGS2-202ENST00000553834 EIF4G3O43432 1585 aaKnown RBP21.69■■□□□ 1.06
DEGS2-202ENST00000553834 TRIM41Q8WV44 630 aa21.67■■□□□ 1.06
DEGS2-202ENST00000553834 AQRO60306 1485 aaKnown RBP eCLIP21.64■■□□□ 1.06
DEGS2-202ENST00000553834 TDRD9Q8NDG6 1382 aaKnown RBP21.62■■□□□ 1.05
DEGS2-202ENST00000553834 ABCA5Q8WWZ7 1642 aa21.59■■□□□ 1.05
DEGS2-202ENST00000553834 GAPVD1Q14C86 1478 aa21.57■■□□□ 1.04
DEGS2-202ENST00000553834 GRIN2BQ13224 1484 aa21.54■■□□□ 1.04
DEGS2-202ENST00000553834 PBRM1Q86U86 1689 aa21.53■■□□□ 1.04
DEGS2-202ENST00000553834 MAGI1Q96QZ7 1491 aaPredicted RBP21.48■■□□□ 1.03
DEGS2-202ENST00000553834 KIF27Q86VH2 1401 aa21.46■■□□□ 1.03
DEGS2-202ENST00000553834 SNAPC4Q5SXM2 1469 aa21.45■■□□□ 1.03
DEGS2-202ENST00000553834 ERICH3Q5RHP9 1530 aa21.45■■□□□ 1.02
DEGS2-202ENST00000553834 OSCARQ8IYS5 282 aa21.44■■□□□ 1.02
DEGS2-202ENST00000553834 CHIC1Q5VXU3 224 aa21.4■■□□□ 1.02
DEGS2-202ENST00000553834 CHD1O14646 1710 aa21.38■■□□□ 1.01
DEGS2-202ENST00000553834 SYNJ2O15056 1496 aa21.38■■□□□ 1.01
DEGS2-202ENST00000553834 ADAMTS12P58397 1594 aa21.35■■□□□ 1.01
DEGS2-202ENST00000553834 IGF1RP08069 1367 aa21.34■■□□□ 1.01
DEGS2-202ENST00000553834 FHAD1B1AJZ9 1412 aa21.33■■□□□ 1.01
DEGS2-202ENST00000553834 CHMP7Q8WUX9 453 aaPredicted RBP21.33■■□□□ 1.01
DEGS2-202ENST00000553834 FBLN2P98095 1184 aa21.32■■□□□ 1
DEGS2-202ENST00000553834 CUL7Q14999 1698 aa21.31■■□□□ 1
DEGS2-202ENST00000553834 RUSC2Q8N2Y8 1516 aa21.27■■□□□ 1
DEGS2-202ENST00000553834 GRIN2AQ12879 1464 aa21.26■□□□□ 0.99
DEGS2-202ENST00000553834 EEA1Q15075 1411 aa21.21■□□□□ 0.99
DEGS2-202ENST00000553834 CARMIL1Q5VZK9 1371 aa21.21■□□□□ 0.99
DEGS2-202ENST00000553834 CLASP1Q7Z460 1538 aa21.16■□□□□ 0.98
DEGS2-202ENST00000553834 NUP160Q12769 1436 aa21.16■□□□□ 0.98
DEGS2-202ENST00000553834 CEP170Q5SW79 1584 aa21.14■□□□□ 0.97
DEGS2-202ENST00000553834 RAPGEF2Q9Y4G8 1499 aa21.12■□□□□ 0.97
DEGS2-202ENST00000553834 CSRNP3Q8WYN3 585 aa21.11■□□□□ 0.97
DEGS2-202ENST00000553834 PRXQ9BXM0 1461 aa21.1■□□□□ 0.97
DEGS2-202ENST00000553834 KIAA0586Q9BVV6 1533 aa21.02■□□□□ 0.96
DEGS2-202ENST00000553834 FAM9AQ8IZU1 332 aaPredicted RBP21.01■□□□□ 0.95
DEGS2-202ENST00000553834 RIMBP3CA6NJZ7 1639 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms