RNA–Protein interactions for RNA: ENST00000553718.1

TTC8-208, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 3

Gene TTC8, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-208ENST00000553718 NISCHQ9Y2I1 1504 aa23.21■■□□□ 1.31
TTC8-208ENST00000553718 CCDC180Q9P1Z9 1646 aa20.04■□□□□ 0.8
TTC8-208ENST00000553718 ZCCHC6Q5VYS8 1495 aaKnown RBP19.59■□□□□ 0.73
TTC8-208ENST00000553718 DCAF1Q9Y4B6 1507 aa19.32■□□□□ 0.68
TTC8-208ENST00000553718 SHROOM4Q9ULL8 1493 aa19.02■□□□□ 0.63
TTC8-208ENST00000553718 MYO15BQ96JP2 1530 aa18.96■□□□□ 0.63
TTC8-208ENST00000553718 DCAF8L2P0C7V8 631 aa18.84■□□□□ 0.61
TTC8-208ENST00000553718 SUPT5HO00267 1087 aaKnown RBP18.62■□□□□ 0.57
TTC8-208ENST00000553718 NACADO15069 1562 aa18.59■□□□□ 0.57
TTC8-208ENST00000553718 ABCC9O60706 1549 aa18.37■□□□□ 0.53
TTC8-208ENST00000553718 SCRIBQ14160 1630 aa18.31■□□□□ 0.52
TTC8-208ENST00000553718 RB1CC1Q8TDY2 1594 aa18.27■□□□□ 0.52
TTC8-208ENST00000553718 CHIC1Q5VXU3 224 aa18.19■□□□□ 0.5
TTC8-208ENST00000553718 RSF1Q96T23 1441 aaPredicted RBP18.17■□□□□ 0.5
TTC8-208ENST00000553718 CECR2Q9BXF3 1484 aa17.9■□□□□ 0.46
TTC8-208ENST00000553718 BAZ1AQ9NRL2 1556 aaPredicted RBP17.9■□□□□ 0.46
TTC8-208ENST00000553718 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
TTC8-208ENST00000553718 UNC13AQ9UPW8 1703 aa17.77■□□□□ 0.44
TTC8-208ENST00000553718 WIZO95785 1651 aa17.71■□□□□ 0.42
TTC8-208ENST00000553718 SMARCA4P51532 1647 aa17.69■□□□□ 0.42
TTC8-208ENST00000553718 BICRAQ9NZM4 1560 aa17.65■□□□□ 0.42
TTC8-208ENST00000553718 TOP2AP11388 1531 aaKnown RBP17.64■□□□□ 0.41
TTC8-208ENST00000553718 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
TTC8-208ENST00000553718 TRIM41Q8WV44 630 aa17.58■□□□□ 0.4
TTC8-208ENST00000553718 PEG3Q9GZU2 1588 aa17.57■□□□□ 0.4
TTC8-208ENST00000553718 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
TTC8-208ENST00000553718 SMARCA2P51531 1590 aa17.45■□□□□ 0.38
TTC8-208ENST00000553718 CCDC88BA6NC98 1476 aa17.44■□□□□ 0.38
TTC8-208ENST00000553718 PABPN1Q86U42 306 aaKnown RBP eCLIP17.41■□□□□ 0.38
TTC8-208ENST00000553718 LOC105371045A0A1W2PR82 267 aa17.4■□□□□ 0.38
TTC8-208ENST00000553718 ATAD2BQ9ULI0 1458 aa17.33■□□□□ 0.37
TTC8-208ENST00000553718 BAZ1BQ9UIG0 1483 aaKnown RBP17.23■□□□□ 0.35
TTC8-208ENST00000553718 EEA1Q15075 1411 aa17.22■□□□□ 0.35
TTC8-208ENST00000553718 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
TTC8-208ENST00000553718 TRIM26Q12899 539 aaPredicted RBP17.16■□□□□ 0.34
TTC8-208ENST00000553718 HMGXB3Q12766 1538 aa17.16■□□□□ 0.34
TTC8-208ENST00000553718 HRCP23327 699 aa17.11■□□□□ 0.33
TTC8-208ENST00000553718 FAM9AQ8IZU1 332 aaPredicted RBP17.11■□□□□ 0.33
TTC8-208ENST00000553718 PCGF6Q9BYE7 350 aa17.11■□□□□ 0.33
TTC8-208ENST00000553718 ABCC8Q09428 1581 aa17.11■□□□□ 0.33
TTC8-208ENST00000553718 WRNQ14191 1432 aaPredicted RBP eCLIP17.1■□□□□ 0.33
TTC8-208ENST00000553718 CSRNP3Q8WYN3 585 aa17■□□□□ 0.31
TTC8-208ENST00000553718 TNIKQ9UKE5 1360 aa17■□□□□ 0.31
TTC8-208ENST00000553718 SOGA1O94964 1423 aa16.96■□□□□ 0.3
TTC8-208ENST00000553718 SYNJ1O43426 1573 aa16.9■□□□□ 0.3
TTC8-208ENST00000553718 GOLGA3Q08378 1498 aa16.9■□□□□ 0.3
TTC8-208ENST00000553718 TOP2BQ02880 1626 aa16.89■□□□□ 0.29
TTC8-208ENST00000553718 CFTRP13569 1480 aa16.88■□□□□ 0.29
TTC8-208ENST00000553718 BIVM-ERCC5R4GMW8 1640 aa16.87■□□□□ 0.29
TTC8-208ENST00000553718 KIF21BO75037 1637 aa16.86■□□□□ 0.29
TTC8-208ENST00000553718 CEP164Q9UPV0 1460 aa16.86■□□□□ 0.29
TTC8-208ENST00000553718 ZEB1P37275 1124 aaPredicted RBP16.84■□□□□ 0.29
TTC8-208ENST00000553718 RUSC2Q8N2Y8 1516 aa16.83■□□□□ 0.28
TTC8-208ENST00000553718 CEP162Q5TB80 1403 aa16.81■□□□□ 0.28
TTC8-208ENST00000553718 PRDM2Q13029 1718 aa16.75■□□□□ 0.27
TTC8-208ENST00000553718 CADPSQ9ULU8 1353 aa16.74■□□□□ 0.27
TTC8-208ENST00000553718 UBTFP17480 764 aaKnown RBP16.73■□□□□ 0.27
TTC8-208ENST00000553718 EHMT2Q96KQ7 1210 aa16.71■□□□□ 0.27
TTC8-208ENST00000553718 ERICH3Q5RHP9 1530 aa16.7■□□□□ 0.26
TTC8-208ENST00000553718 CC2D2AQ9P2K1 1620 aa16.68■□□□□ 0.26
TTC8-208ENST00000553718 CUX1P39880 1505 aa16.68■□□□□ 0.26
TTC8-208ENST00000553718 PRXQ9BXM0 1461 aa16.67■□□□□ 0.26
TTC8-208ENST00000553718 KIF27Q86VH2 1401 aa16.65■□□□□ 0.26
TTC8-208ENST00000553718 DNAJC5Q9H3Z4 198 aa16.61■□□□□ 0.25
TTC8-208ENST00000553718 CLIP1P30622 1438 aa16.6■□□□□ 0.25
TTC8-208ENST00000553718 RAPGEF2Q9Y4G8 1499 aa16.6■□□□□ 0.25
TTC8-208ENST00000553718 VPS8Q8N3P4 1428 aa16.56■□□□□ 0.24
TTC8-208ENST00000553718 FANCD2Q9BXW9 1451 aa16.48■□□□□ 0.23
TTC8-208ENST00000553718 LAMC3Q9Y6N6 1575 aa16.47■□□□□ 0.23
TTC8-208ENST00000553718 IGF1RP08069 1367 aa16.45■□□□□ 0.22
TTC8-208ENST00000553718 DNMBPQ6XZF7 1577 aa16.44■□□□□ 0.22
TTC8-208ENST00000553718 FGD5Q6ZNL6 1462 aa16.43■□□□□ 0.22
TTC8-208ENST00000553718 APLP2Q06481 763 aa16.43■□□□□ 0.22
TTC8-208ENST00000553718 PPARGC1BQ86YN6 1023 aaKnown RBP16.43■□□□□ 0.22
TTC8-208ENST00000553718 CUX2O14529 1486 aa16.42■□□□□ 0.22
TTC8-208ENST00000553718 ABCA10Q8WWZ4 1543 aa16.39■□□□□ 0.21
TTC8-208ENST00000553718 CARMIL1Q5VZK9 1371 aa16.37■□□□□ 0.21
TTC8-208ENST00000553718 TOPBP1Q92547 1522 aa16.36■□□□□ 0.21
TTC8-208ENST00000553718 ARAP1Q96P48 1450 aa16.35■□□□□ 0.21
TTC8-208ENST00000553718 PDS5BQ9NTI5 1447 aa16.35■□□□□ 0.21
TTC8-208ENST00000553718 MAP3K1Q13233 1512 aa16.31■□□□□ 0.2
TTC8-208ENST00000553718 POLA1P09884 1462 aaPredicted RBP16.3■□□□□ 0.2
TTC8-208ENST00000553718 CCER1Q8TC90 406 aaPredicted RBP16.3■□□□□ 0.2
TTC8-208ENST00000553718 ARHGAP35Q9NRY4 1499 aa16.29■□□□□ 0.2
TTC8-208ENST00000553718 CUL7Q14999 1698 aa16.27■□□□□ 0.19
TTC8-208ENST00000553718 NESP48681 1621 aa16.26■□□□□ 0.19
TTC8-208ENST00000553718 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.23■□□□□ 0.19
TTC8-208ENST00000553718 URB2Q14146 1524 aaKnown RBP16.22■□□□□ 0.19
TTC8-208ENST00000553718 FHAD1B1AJZ9 1412 aa16.21■□□□□ 0.19
TTC8-208ENST00000553718 WDR97A6NE52 1622 aa16.2■□□□□ 0.18
TTC8-208ENST00000553718 RAD54L2Q9Y4B4 1467 aa16.2■□□□□ 0.18
TTC8-208ENST00000553718 EFCAB5A4FU69 1503 aa16.19■□□□□ 0.18
TTC8-208ENST00000553718 RRBP1Q9P2E9 1410 aaKnown RBP16.19■□□□□ 0.18
TTC8-208ENST00000553718 CLSPNQ9HAW4 1339 aa16.16■□□□□ 0.18
TTC8-208ENST00000553718 ABCA5Q8WWZ7 1642 aa16.15■□□□□ 0.18
TTC8-208ENST00000553718 AQRO60306 1485 aaKnown RBP eCLIP16.15■□□□□ 0.18
TTC8-208ENST00000553718 TTBK1Q5TCY1 1321 aaPredicted RBP16.14■□□□□ 0.17
TTC8-208ENST00000553718 RANGAP1P46060 587 aaPredicted RBP16.12■□□□□ 0.17
TTC8-208ENST00000553718 GAPVD1Q14C86 1478 aa16.11■□□□□ 0.17
TTC8-208ENST00000553718 KANK4Q5T7N3 995 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms