RNA–Protein interactions for RNA: ENST00000553457.1

DCAF4-212, Transcript of DDB1 and CUL4 associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene DCAF4, Length 2,896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4-212ENST00000553457 NISCHQ9Y2I1 1504 aa18.94■□□□□ 0.62
DCAF4-212ENST00000553457 AEBP2Q6ZN18 517 aaPredicted RBP18.42■□□□□ 0.54
DCAF4-212ENST00000553457 CHIC1Q5VXU3 224 aa18.3■□□□□ 0.52
DCAF4-212ENST00000553457 CCDC180Q9P1Z9 1646 aa16.62■□□□□ 0.25
DCAF4-212ENST00000553457 PHF23Q9BUL5 403 aaPredicted RBP16.33■□□□□ 0.21
DCAF4-212ENST00000553457 DCAF8L2P0C7V8 631 aa16.03■□□□□ 0.16
DCAF4-212ENST00000553457 ABCC9O60706 1549 aa16.01■□□□□ 0.15
DCAF4-212ENST00000553457 ZCCHC6Q5VYS8 1495 aaKnown RBP15.86■□□□□ 0.13
DCAF4-212ENST00000553457 SHROOM4Q9ULL8 1493 aa15.77■□□□□ 0.12
DCAF4-212ENST00000553457 DCAF1Q9Y4B6 1507 aa15.62■□□□□ 0.09
DCAF4-212ENST00000553457 NACADO15069 1562 aa15.53■□□□□ 0.08
DCAF4-212ENST00000553457 MYO15BQ96JP2 1530 aa15.51■□□□□ 0.07
DCAF4-212ENST00000553457 RB1CC1Q8TDY2 1594 aa15.47■□□□□ 0.07
DCAF4-212ENST00000553457 SCRIBQ14160 1630 aa15.31■□□□□ 0.04
DCAF4-212ENST00000553457 SENP3Q9H4L4 574 aaPredicted RBP15.26■□□□□ 0.03
DCAF4-212ENST00000553457 UNC13AQ9UPW8 1703 aa15.22■□□□□ 0.03
DCAF4-212ENST00000553457 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
DCAF4-212ENST00000553457 PLPPR3Q6T4P5 718 aa15.06■□□□□ 0
DCAF4-212ENST00000553457 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ 0
DCAF4-212ENST00000553457 BICRAQ9NZM4 1560 aa15.05■□□□□ -0
DCAF4-212ENST00000553457 CECR2Q9BXF3 1484 aa14.79□□□□□ -0.04
DCAF4-212ENST00000553457 RSF1Q96T23 1441 aaPredicted RBP14.67□□□□□ -0.06
DCAF4-212ENST00000553457 MROH2BQ7Z745 1585 aa14.65□□□□□ -0.06
DCAF4-212ENST00000553457 BAZ1AQ9NRL2 1556 aaPredicted RBP14.63□□□□□ -0.07
DCAF4-212ENST00000553457 SMARCA4P51532 1647 aa14.63□□□□□ -0.07
DCAF4-212ENST00000553457 EIF4G1Q04637 1599 aaKnown RBP14.6□□□□□ -0.07
DCAF4-212ENST00000553457 WIZO95785 1651 aa14.54□□□□□ -0.08
DCAF4-212ENST00000553457 CC2D2AQ9P2K1 1620 aa14.47□□□□□ -0.09
DCAF4-212ENST00000553457 ATAD2BQ9ULI0 1458 aa14.44□□□□□ -0.1
DCAF4-212ENST00000553457 PEG3Q9GZU2 1588 aa14.43□□□□□ -0.1
DCAF4-212ENST00000553457 ADRA2BP18089 450 aa14.43□□□□□ -0.1
DCAF4-212ENST00000553457 SMARCA2P51531 1590 aa14.4□□□□□ -0.1
DCAF4-212ENST00000553457 DNAJC5BQ9UF47 199 aa14.37□□□□□ -0.11
DCAF4-212ENST00000553457 BAZ1BQ9UIG0 1483 aaKnown RBP14.34□□□□□ -0.11
DCAF4-212ENST00000553457 NCAPD3P42695 1498 aa14.34□□□□□ -0.11
DCAF4-212ENST00000553457 TOP2AP11388 1531 aaKnown RBP14.33□□□□□ -0.12
DCAF4-212ENST00000553457 PPP6R1Q9UPN7 881 aa14.32□□□□□ -0.12
DCAF4-212ENST00000553457 HMGXB3Q12766 1538 aa14.3□□□□□ -0.12
DCAF4-212ENST00000553457 FOXD1Q16676 465 aa14.29□□□□□ -0.12
DCAF4-212ENST00000553457 CCDC88BA6NC98 1476 aa14.22□□□□□ -0.13
DCAF4-212ENST00000553457 TRIM41Q8WV44 630 aa14.1□□□□□ -0.15
DCAF4-212ENST00000553457 FAM9AQ8IZU1 332 aaPredicted RBP14.05□□□□□ -0.16
DCAF4-212ENST00000553457 EHMT2Q96KQ7 1210 aa14.03□□□□□ -0.16
DCAF4-212ENST00000553457 ABCC8Q09428 1581 aa14.02□□□□□ -0.17
DCAF4-212ENST00000553457 NESP48681 1621 aa13.98□□□□□ -0.17
DCAF4-212ENST00000553457 CFTRP13569 1480 aa13.96□□□□□ -0.17
DCAF4-212ENST00000553457 CADPSQ9ULU8 1353 aa13.96□□□□□ -0.17
DCAF4-212ENST00000553457 KCNA4P22459 653 aa13.91□□□□□ -0.18
DCAF4-212ENST00000553457 LOC105371045A0A1W2PR82 267 aa13.9□□□□□ -0.18
DCAF4-212ENST00000553457 LAMC3Q9Y6N6 1575 aa13.9□□□□□ -0.18
DCAF4-212ENST00000553457 PRDM2Q13029 1718 aa13.89□□□□□ -0.19
DCAF4-212ENST00000553457 WRNQ14191 1432 aaPredicted RBP eCLIP13.83□□□□□ -0.2
DCAF4-212ENST00000553457 FANCD2Q9BXW9 1451 aa13.82□□□□□ -0.2
DCAF4-212ENST00000553457 KIF21AQ7Z4S6 1674 aa13.81□□□□□ -0.2
DCAF4-212ENST00000553457 PDS5BQ9NTI5 1447 aa13.78□□□□□ -0.2
DCAF4-212ENST00000553457 SYNJ1O43426 1573 aa13.78□□□□□ -0.2
DCAF4-212ENST00000553457 CEP164Q9UPV0 1460 aa13.75□□□□□ -0.21
DCAF4-212ENST00000553457 SOGA1O94964 1423 aa13.75□□□□□ -0.21
DCAF4-212ENST00000553457 ERCC6Q03468 1493 aa13.72□□□□□ -0.21
DCAF4-212ENST00000553457 CUX1P39880 1505 aa13.72□□□□□ -0.21
DCAF4-212ENST00000553457 RUSC2Q8N2Y8 1516 aa13.71□□□□□ -0.22
DCAF4-212ENST00000553457 URB2Q14146 1524 aaKnown RBP13.69□□□□□ -0.22
DCAF4-212ENST00000553457 TOP2BQ02880 1626 aa13.67□□□□□ -0.22
DCAF4-212ENST00000553457 BIVM-ERCC5R4GMW8 1640 aa13.66□□□□□ -0.22
DCAF4-212ENST00000553457 TOPBP1Q92547 1522 aa13.65□□□□□ -0.22
DCAF4-212ENST00000553457 DNMBPQ6XZF7 1577 aa13.65□□□□□ -0.22
DCAF4-212ENST00000553457 MRC2Q9UBG0 1479 aa13.64□□□□□ -0.23
DCAF4-212ENST00000553457 THOC2Q8NI27 1593 aaKnown RBP13.63□□□□□ -0.23
DCAF4-212ENST00000553457 PIAS4Q8N2W9 510 aaPredicted RBP13.63□□□□□ -0.23
DCAF4-212ENST00000553457 FGD5Q6ZNL6 1462 aa13.6□□□□□ -0.23
DCAF4-212ENST00000553457 WDR62O43379 1518 aa13.59□□□□□ -0.23
DCAF4-212ENST00000553457 RANGAP1P46060 587 aaPredicted RBP13.59□□□□□ -0.23
DCAF4-212ENST00000553457 CSRNP3Q8WYN3 585 aa13.59□□□□□ -0.23
DCAF4-212ENST00000553457 POLA1P09884 1462 aaPredicted RBP13.57□□□□□ -0.24
DCAF4-212ENST00000553457 UBTFP17480 764 aaKnown RBP13.57□□□□□ -0.24
DCAF4-212ENST00000553457 RAD54L2Q9Y4B4 1467 aa13.55□□□□□ -0.24
DCAF4-212ENST00000553457 CUX2O14529 1486 aa13.51□□□□□ -0.25
DCAF4-212ENST00000553457 TARBP1Q13395 1621 aaKnown RBP13.48□□□□□ -0.25
DCAF4-212ENST00000553457 EEA1Q15075 1411 aa13.47□□□□□ -0.25
DCAF4-212ENST00000553457 KIF27Q86VH2 1401 aa13.46□□□□□ -0.25
DCAF4-212ENST00000553457 WDR97A6NE52 1622 aa13.46□□□□□ -0.26
DCAF4-212ENST00000553457 ABCA10Q8WWZ4 1543 aa13.45□□□□□ -0.26
DCAF4-212ENST00000553457 TDRD9Q8NDG6 1382 aaKnown RBP13.44□□□□□ -0.26
DCAF4-212ENST00000553457 PPP4R3CPQ6ZMV5 832 aa13.43□□□□□ -0.26
DCAF4-212ENST00000553457 RAPGEF2Q9Y4G8 1499 aa13.43□□□□□ -0.26
DCAF4-212ENST00000553457 PPARGC1BQ86YN6 1023 aaKnown RBP13.43□□□□□ -0.26
DCAF4-212ENST00000553457 ZNF608Q9ULD9 1512 aaPredicted RBP13.42□□□□□ -0.26
DCAF4-212ENST00000553457 IFT140Q96RY7 1462 aa13.42□□□□□ -0.26
DCAF4-212ENST00000553457 GOLGA3Q08378 1498 aa13.41□□□□□ -0.26
DCAF4-212ENST00000553457 TTBK1Q5TCY1 1321 aaPredicted RBP13.39□□□□□ -0.27
DCAF4-212ENST00000553457 AQRO60306 1485 aaKnown RBP eCLIP13.39□□□□□ -0.272e-6■■■■■ 26.9
DCAF4-212ENST00000553457 ABCA5Q8WWZ7 1642 aa13.38□□□□□ -0.27
DCAF4-212ENST00000553457 EIF4G3O43432 1585 aaKnown RBP13.36□□□□□ -0.27
DCAF4-212ENST00000553457 IGF1RP08069 1367 aa13.36□□□□□ -0.27
DCAF4-212ENST00000553457 CEP162Q5TB80 1403 aa13.36□□□□□ -0.27
DCAF4-212ENST00000553457 GAPVD1Q14C86 1478 aa13.36□□□□□ -0.27
DCAF4-212ENST00000553457 TNIKQ9UKE5 1360 aa13.33□□□□□ -0.28
DCAF4-212ENST00000553457 KIF21BO75037 1637 aa13.33□□□□□ -0.28
DCAF4-212ENST00000553457 PBRM1Q86U86 1689 aa13.32□□□□□ -0.28
DCAF4-212ENST00000553457 CARMIL1Q5VZK9 1371 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms