RNA–Protein interactions for RNA: ENST00000553407.5

RNF34-204, Transcript of ring finger protein 34, humanhuman

TSL 2

Gene RNF34, Length 1,612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34-204ENST00000553407 NISCHQ9Y2I1 1504 aa33.56■■■□□ 2.96
RNF34-204ENST00000553407 CCDC180Q9P1Z9 1646 aa29.38■■■□□ 2.29
RNF34-204ENST00000553407 ZCCHC6Q5VYS8 1495 aaKnown RBP28.34■■■□□ 2.13
RNF34-204ENST00000553407 ABCC9O60706 1549 aa28.25■■■□□ 2.11
RNF34-204ENST00000553407 SHROOM4Q9ULL8 1493 aa27.93■■■□□ 2.06
RNF34-204ENST00000553407 DCAF1Q9Y4B6 1507 aa27.79■■■□□ 2.04
RNF34-204ENST00000553407 DCAF8L2P0C7V8 631 aa27.74■■■□□ 2.03
RNF34-204ENST00000553407 MYO15BQ96JP2 1530 aa27.48■■□□□ 1.99
RNF34-204ENST00000553407 NACADO15069 1562 aa27.47■■□□□ 1.99
RNF34-204ENST00000553407 RB1CC1Q8TDY2 1594 aa27.35■■□□□ 1.97
RNF34-204ENST00000553407 SUPT5HO00267 1087 aaKnown RBP27.33■■□□□ 1.97
RNF34-204ENST00000553407 SCRIBQ14160 1630 aa26.98■■□□□ 1.91
RNF34-204ENST00000553407 UNC13AQ9UPW8 1703 aa26.86■■□□□ 1.89
RNF34-204ENST00000553407 BICRAQ9NZM4 1560 aa26.61■■□□□ 1.85
RNF34-204ENST00000553407 CHIC1Q5VXU3 224 aa26.55■■□□□ 1.84
RNF34-204ENST00000553407 PABPN1Q86U42 306 aaKnown RBP eCLIP26.54■■□□□ 1.84
RNF34-204ENST00000553407 RSF1Q96T23 1441 aaPredicted RBP26.33■■□□□ 1.81
RNF34-204ENST00000553407 CECR2Q9BXF3 1484 aa26.06■■□□□ 1.76
RNF34-204ENST00000553407 MROH2BQ7Z745 1585 aa25.92■■□□□ 1.74
RNF34-204ENST00000553407 BAZ1AQ9NRL2 1556 aaPredicted RBP25.9■■□□□ 1.74
RNF34-204ENST00000553407 SMARCA4P51532 1647 aa25.83■■□□□ 1.72
RNF34-204ENST00000553407 EIF4G1Q04637 1599 aaKnown RBP25.81■■□□□ 1.72
RNF34-204ENST00000553407 WIZO95785 1651 aa25.76■■□□□ 1.71
RNF34-204ENST00000553407 TRIM41Q8WV44 630 aa25.69■■□□□ 1.7
RNF34-204ENST00000553407 TOP2AP11388 1531 aaKnown RBP25.57■■□□□ 1.68
RNF34-204ENST00000553407 CC2D2AQ9P2K1 1620 aa25.56■■□□□ 1.68
RNF34-204ENST00000553407 LOC105371045A0A1W2PR82 267 aa25.53■■□□□ 1.68
RNF34-204ENST00000553407 PEG3Q9GZU2 1588 aa25.52■■□□□ 1.68
RNF34-204ENST00000553407 ATAD2BQ9ULI0 1458 aa25.51■■□□□ 1.68
RNF34-204ENST00000553407 SMARCA2P51531 1590 aa25.46■■□□□ 1.67
RNF34-204ENST00000553407 DNAJC5BQ9UF47 199 aa25.41■■□□□ 1.66
RNF34-204ENST00000553407 NCAPD3P42695 1498 aa25.37■■□□□ 1.65
RNF34-204ENST00000553407 BAZ1BQ9UIG0 1483 aaKnown RBP25.32■■□□□ 1.64
RNF34-204ENST00000553407 CCDC88BA6NC98 1476 aa25.29■■□□□ 1.64
RNF34-204ENST00000553407 HMGXB3Q12766 1538 aa25.29■■□□□ 1.64
RNF34-204ENST00000553407 PCGF6Q9BYE7 350 aa25.29■■□□□ 1.64
RNF34-204ENST00000553407 HRCP23327 699 aa25.24■■□□□ 1.63
RNF34-204ENST00000553407 FAM9AQ8IZU1 332 aaPredicted RBP25.18■■□□□ 1.62
RNF34-204ENST00000553407 TRIM26Q12899 539 aaPredicted RBP25.15■■□□□ 1.62
RNF34-204ENST00000553407 ABCC8Q09428 1581 aa24.99■■□□□ 1.59
RNF34-204ENST00000553407 EEA1Q15075 1411 aa24.97■■□□□ 1.59
RNF34-204ENST00000553407 WRNQ14191 1432 aaPredicted RBP eCLIP24.82■■□□□ 1.56
RNF34-204ENST00000553407 EHMT2Q96KQ7 1210 aa24.76■■□□□ 1.55
RNF34-204ENST00000553407 CSRNP3Q8WYN3 585 aa24.7■■□□□ 1.54
RNF34-204ENST00000553407 SOGA1O94964 1423 aa24.7■■□□□ 1.54
RNF34-204ENST00000553407 ZEB1P37275 1124 aaPredicted RBP24.69■■□□□ 1.54
RNF34-204ENST00000553407 TNIKQ9UKE5 1360 aa24.69■■□□□ 1.54
RNF34-204ENST00000553407 CADPSQ9ULU8 1353 aa24.68■■□□□ 1.54
RNF34-204ENST00000553407 NESP48681 1621 aa24.67■■□□□ 1.54
RNF34-204ENST00000553407 CFTRP13569 1480 aa24.67■■□□□ 1.54
RNF34-204ENST00000553407 GOLGA3Q08378 1498 aa24.62■■□□□ 1.53
RNF34-204ENST00000553407 SYNJ1O43426 1573 aa24.6■■□□□ 1.53
RNF34-204ENST00000553407 LAMC3Q9Y6N6 1575 aa24.58■■□□□ 1.53
RNF34-204ENST00000553407 CEP162Q5TB80 1403 aa24.57■■□□□ 1.52
RNF34-204ENST00000553407 CEP164Q9UPV0 1460 aa24.54■■□□□ 1.52
RNF34-204ENST00000553407 PRDM2Q13029 1718 aa24.53■■□□□ 1.52
RNF34-204ENST00000553407 RUSC2Q8N2Y8 1516 aa24.51■■□□□ 1.51
RNF34-204ENST00000553407 KIF21BO75037 1637 aa24.51■■□□□ 1.51
RNF34-204ENST00000553407 UBTFP17480 764 aaKnown RBP24.5■■□□□ 1.51
RNF34-204ENST00000553407 TOP2BQ02880 1626 aa24.5■■□□□ 1.51
RNF34-204ENST00000553407 BIVM-ERCC5R4GMW8 1640 aa24.45■■□□□ 1.5
RNF34-204ENST00000553407 FANCD2Q9BXW9 1451 aa24.42■■□□□ 1.5
RNF34-204ENST00000553407 PPARGC1BQ86YN6 1023 aaKnown RBP24.39■■□□□ 1.5
RNF34-204ENST00000553407 PDS5BQ9NTI5 1447 aa24.37■■□□□ 1.49
RNF34-204ENST00000553407 KIF21AQ7Z4S6 1674 aa24.37■■□□□ 1.49
RNF34-204ENST00000553407 ERCC6Q03468 1493 aa24.23■■□□□ 1.47
RNF34-204ENST00000553407 CLIP1P30622 1438 aa24.23■■□□□ 1.47
RNF34-204ENST00000553407 ERICH3Q5RHP9 1530 aa24.22■■□□□ 1.47
RNF34-204ENST00000553407 CUX1P39880 1505 aa24.2■■□□□ 1.46
RNF34-204ENST00000553407 RAPGEF2Q9Y4G8 1499 aa24.17■■□□□ 1.46
RNF34-204ENST00000553407 URB2Q14146 1524 aaKnown RBP24.17■■□□□ 1.46
RNF34-204ENST00000553407 KIF27Q86VH2 1401 aa24.16■■□□□ 1.46
RNF34-204ENST00000553407 VPS8Q8N3P4 1428 aa24.13■■□□□ 1.45
RNF34-204ENST00000553407 PRXQ9BXM0 1461 aa24.12■■□□□ 1.45
RNF34-204ENST00000553407 MRC2Q9UBG0 1479 aa24.12■■□□□ 1.45
RNF34-204ENST00000553407 TOPBP1Q92547 1522 aa24.11■■□□□ 1.45
RNF34-204ENST00000553407 THOC2Q8NI27 1593 aaKnown RBP24.1■■□□□ 1.45
RNF34-204ENST00000553407 DNMBPQ6XZF7 1577 aa24.1■■□□□ 1.45
RNF34-204ENST00000553407 APLP2Q06481 763 aa24.07■■□□□ 1.44
RNF34-204ENST00000553407 CCER1Q8TC90 406 aaPredicted RBP24.04■■□□□ 1.44
RNF34-204ENST00000553407 WDR62O43379 1518 aa24.04■■□□□ 1.44
RNF34-204ENST00000553407 FGD5Q6ZNL6 1462 aa23.99■■□□□ 1.43
RNF34-204ENST00000553407 POLA1P09884 1462 aaPredicted RBP23.96■■□□□ 1.43
RNF34-204ENST00000553407 TTBK1Q5TCY1 1321 aaPredicted RBP23.94■■□□□ 1.42
RNF34-204ENST00000553407 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.93■■□□□ 1.42
RNF34-204ENST00000553407 RAD54L2Q9Y4B4 1467 aa23.89■■□□□ 1.41
RNF34-204ENST00000553407 CUX2O14529 1486 aa23.87■■□□□ 1.41
RNF34-204ENST00000553407 ARAP1Q96P48 1450 aa23.82■■□□□ 1.4
RNF34-204ENST00000553407 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
RNF34-204ENST00000553407 IGF1RP08069 1367 aa23.78■■□□□ 1.4
RNF34-204ENST00000553407 RANGAP1P46060 587 aaPredicted RBP23.78■■□□□ 1.4
RNF34-204ENST00000553407 WDR97A6NE52 1622 aa23.76■■□□□ 1.39
RNF34-204ENST00000553407 ABCA10Q8WWZ4 1543 aa23.75■■□□□ 1.39
RNF34-204ENST00000553407 IFT140Q96RY7 1462 aa23.74■■□□□ 1.39
RNF34-204ENST00000553407 CARMIL1Q5VZK9 1371 aa23.73■■□□□ 1.39
RNF34-204ENST00000553407 ZNF608Q9ULD9 1512 aaPredicted RBP23.69■■□□□ 1.38
RNF34-204ENST00000553407 ARHGAP35Q9NRY4 1499 aa23.68■■□□□ 1.38
RNF34-204ENST00000553407 TDRD9Q8NDG6 1382 aaKnown RBP23.67■■□□□ 1.38
RNF34-204ENST00000553407 ABCA5Q8WWZ7 1642 aa23.63■■□□□ 1.37
RNF34-204ENST00000553407 HNRNPUL2Q1KMD3 747 aaKnown RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms