RNA–Protein interactions for RNA: ENST00000553019.1

EEA1-205, Transcript of early endosome antigen 1, humanhuman

TSL 5

Gene EEA1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEA1-205ENST00000553019 NISCHQ9Y2I1 1504 aa45.25■■■■■ 4.83
EEA1-205ENST00000553019 CCDC180Q9P1Z9 1646 aa39.93■■■■□ 3.98
EEA1-205ENST00000553019 ABCC9O60706 1549 aa38.58■■■■□ 3.77
EEA1-205ENST00000553019 ZCCHC6Q5VYS8 1495 aaKnown RBP37.84■■■■□ 3.65
EEA1-205ENST00000553019 DCAF8L2P0C7V8 631 aa37.43■■■■□ 3.58
EEA1-205ENST00000553019 DCAF1Q9Y4B6 1507 aa37.41■■■■□ 3.58
EEA1-205ENST00000553019 NACADO15069 1562 aa37.36■■■■□ 3.57
EEA1-205ENST00000553019 MYO15BQ96JP2 1530 aa37.32■■■■□ 3.57
EEA1-205ENST00000553019 RB1CC1Q8TDY2 1594 aa37.25■■■■□ 3.55
EEA1-205ENST00000553019 UNC13AQ9UPW8 1703 aa36.63■■■■□ 3.45
EEA1-205ENST00000553019 SCRIBQ14160 1630 aa36.56■■■■□ 3.44
EEA1-205ENST00000553019 BICRAQ9NZM4 1560 aa36.32■■■■□ 3.4
EEA1-205ENST00000553019 SHROOM4Q9ULL8 1493 aa36.14■■■■□ 3.38
EEA1-205ENST00000553019 PABPN1Q86U42 306 aaKnown RBP eCLIP36.14■■■■□ 3.38
EEA1-205ENST00000553019 CECR2Q9BXF3 1484 aa35.29■■■■□ 3.24
EEA1-205ENST00000553019 EIF4G1Q04637 1599 aaKnown RBP35.2■■■■□ 3.23
EEA1-205ENST00000553019 SMARCA4P51532 1647 aa35.01■■■■□ 3.19
EEA1-205ENST00000553019 DNAJC5BQ9UF47 199 aa35■■■■□ 3.19
EEA1-205ENST00000553019 MROH2BQ7Z745 1585 aa34.96■■■■□ 3.19
EEA1-205ENST00000553019 BAZ1AQ9NRL2 1556 aaPredicted RBP34.96■■■■□ 3.19
EEA1-205ENST00000553019 CC2D2AQ9P2K1 1620 aa34.92■■■■□ 3.18
EEA1-205ENST00000553019 RSF1Q96T23 1441 aaPredicted RBP34.72■■■■□ 3.15
EEA1-205ENST00000553019 ATAD2BQ9ULI0 1458 aa34.65■■■■□ 3.14
EEA1-205ENST00000553019 PEG3Q9GZU2 1588 aa34.64■■■■□ 3.14
EEA1-205ENST00000553019 WIZO95785 1651 aa34.62■■■■□ 3.13
EEA1-205ENST00000553019 SMARCA2P51531 1590 aa34.54■■■■□ 3.12
EEA1-205ENST00000553019 NCAPD3P42695 1498 aa34.5■■■■□ 3.11
EEA1-205ENST00000553019 HMGXB3Q12766 1538 aa34.39■■■■□ 3.1
EEA1-205ENST00000553019 BAZ1BQ9UIG0 1483 aaKnown RBP34.33■■■■□ 3.09
EEA1-205ENST00000553019 TOP2AP11388 1531 aaKnown RBP34.2■■■■□ 3.07
EEA1-205ENST00000553019 SUPT5HO00267 1087 aaKnown RBP34.19■■■■□ 3.06
EEA1-205ENST00000553019 CCDC88BA6NC98 1476 aa33.82■■■■□ 3.01
EEA1-205ENST00000553019 NESP48681 1621 aa33.63■■■□□ 2.97
EEA1-205ENST00000553019 CADPSQ9ULU8 1353 aa33.5■■■□□ 2.95
EEA1-205ENST00000553019 LAMC3Q9Y6N6 1575 aa33.47■■■□□ 2.95
EEA1-205ENST00000553019 CFTRP13569 1480 aa33.47■■■□□ 2.95
EEA1-205ENST00000553019 PRDM2Q13029 1718 aa33.29■■■□□ 2.92
EEA1-205ENST00000553019 KIF21AQ7Z4S6 1674 aa33.23■■■□□ 2.91
EEA1-205ENST00000553019 FANCD2Q9BXW9 1451 aa33.15■■■□□ 2.9
EEA1-205ENST00000553019 PDS5BQ9NTI5 1447 aa33.15■■■□□ 2.9
EEA1-205ENST00000553019 ERCC6Q03468 1493 aa33.05■■■□□ 2.88
EEA1-205ENST00000553019 CEP164Q9UPV0 1460 aa33.02■■■□□ 2.88
EEA1-205ENST00000553019 THOC2Q8NI27 1593 aaKnown RBP32.97■■■□□ 2.87
EEA1-205ENST00000553019 URB2Q14146 1524 aaKnown RBP32.87■■■□□ 2.85
EEA1-205ENST00000553019 MRC2Q9UBG0 1479 aa32.87■■■□□ 2.85
EEA1-205ENST00000553019 ABCC8Q09428 1581 aa32.83■■■□□ 2.85
EEA1-205ENST00000553019 WDR62O43379 1518 aa32.78■■■□□ 2.84
EEA1-205ENST00000553019 CUX1P39880 1505 aa32.75■■■□□ 2.83
EEA1-205ENST00000553019 TOPBP1Q92547 1522 aa32.72■■■□□ 2.83
EEA1-205ENST00000553019 DNMBPQ6XZF7 1577 aa32.7■■■□□ 2.83
EEA1-205ENST00000553019 CUX2O14529 1486 aa32.67■■■□□ 2.82
EEA1-205ENST00000553019 SYNJ1O43426 1573 aa32.66■■■□□ 2.82
EEA1-205ENST00000553019 WRNQ14191 1432 aaPredicted RBP eCLIP32.64■■■□□ 2.82
EEA1-205ENST00000553019 BIVM-ERCC5R4GMW8 1640 aa32.58■■■□□ 2.81
EEA1-205ENST00000553019 TOP2BQ02880 1626 aa32.55■■■□□ 2.8
EEA1-205ENST00000553019 POLA1P09884 1462 aaPredicted RBP32.49■■■□□ 2.79
EEA1-205ENST00000553019 FGD5Q6ZNL6 1462 aa32.49■■■□□ 2.79
EEA1-205ENST00000553019 RAD54L2Q9Y4B4 1467 aa32.39■■■□□ 2.78
EEA1-205ENST00000553019 TARBP1Q13395 1621 aaKnown RBP32.37■■■□□ 2.77
EEA1-205ENST00000553019 CHIC1Q5VXU3 224 aa32.32■■■□□ 2.76
EEA1-205ENST00000553019 SOGA1O94964 1423 aa32.29■■■□□ 2.76
EEA1-205ENST00000553019 IFT140Q96RY7 1462 aa32.29■■■□□ 2.76
EEA1-205ENST00000553019 WDR97A6NE52 1622 aa32.27■■■□□ 2.76
EEA1-205ENST00000553019 ZNF608Q9ULD9 1512 aaPredicted RBP32.25■■■□□ 2.75
EEA1-205ENST00000553019 TRIM41Q8WV44 630 aa32.18■■■□□ 2.74
EEA1-205ENST00000553019 ABCA10Q8WWZ4 1543 aa32.17■■■□□ 2.74
EEA1-205ENST00000553019 EIF4G3O43432 1585 aaKnown RBP32.1■■■□□ 2.73
EEA1-205ENST00000553019 TDRD9Q8NDG6 1382 aaKnown RBP32.09■■■□□ 2.73
EEA1-205ENST00000553019 AQRO60306 1485 aaKnown RBP eCLIP32.08■■■□□ 2.73
EEA1-205ENST00000553019 ABCA5Q8WWZ7 1642 aa32.06■■■□□ 2.72
EEA1-205ENST00000553019 RUSC2Q8N2Y8 1516 aa31.99■■■□□ 2.71
EEA1-205ENST00000553019 GAPVD1Q14C86 1478 aa31.94■■■□□ 2.7
EEA1-205ENST00000553019 PBRM1Q86U86 1689 aa31.92■■■□□ 2.7
EEA1-205ENST00000553019 KIF27Q86VH2 1401 aa31.85■■■□□ 2.69
EEA1-205ENST00000553019 GRIN2BQ13224 1484 aa31.84■■■□□ 2.69
EEA1-205ENST00000553019 SNAPC4Q5SXM2 1469 aa31.78■■■□□ 2.68
EEA1-205ENST00000553019 ERICH3Q5RHP9 1530 aa31.76■■■□□ 2.68
EEA1-205ENST00000553019 IGF1RP08069 1367 aa31.76■■■□□ 2.67
EEA1-205ENST00000553019 ADAMTS12P58397 1594 aa31.7■■■□□ 2.67
EEA1-205ENST00000553019 MAGI1Q96QZ7 1491 aaPredicted RBP31.68■■■□□ 2.66
EEA1-205ENST00000553019 FAM9AQ8IZU1 332 aaPredicted RBP31.62■■■□□ 2.65
EEA1-205ENST00000553019 CHD1O14646 1710 aa31.61■■■□□ 2.65
EEA1-205ENST00000553019 EEA1Q15075 1411 aa31.58■■■□□ 2.65
EEA1-205ENST00000553019 CUL7Q14999 1698 aa31.58■■■□□ 2.65
EEA1-205ENST00000553019 SYNJ2O15056 1496 aa31.57■■■□□ 2.64
EEA1-205ENST00000553019 FHAD1B1AJZ9 1412 aa31.57■■■□□ 2.64
EEA1-205ENST00000553019 CARMIL1Q5VZK9 1371 aa31.53■■■□□ 2.64
EEA1-205ENST00000553019 CSRNP3Q8WYN3 585 aa31.52■■■□□ 2.64
EEA1-205ENST00000553019 PRXQ9BXM0 1461 aa31.51■■■□□ 2.63
EEA1-205ENST00000553019 GRIN2AQ12879 1464 aa31.47■■■□□ 2.63
EEA1-205ENST00000553019 FBLN2P98095 1184 aa31.43■■■□□ 2.62
EEA1-205ENST00000553019 CHMP7Q8WUX9 453 aaPredicted RBP31.42■■■□□ 2.62
EEA1-205ENST00000553019 RAPGEF2Q9Y4G8 1499 aa31.4■■■□□ 2.62
EEA1-205ENST00000553019 CEP170Q5SW79 1584 aa31.38■■■□□ 2.61
EEA1-205ENST00000553019 KIF21BO75037 1637 aa31.35■■■□□ 2.61
EEA1-205ENST00000553019 NUP160Q12769 1436 aa31.33■■■□□ 2.61
EEA1-205ENST00000553019 DNAJC5Q9H3Z4 198 aa31.29■■■□□ 2.6
EEA1-205ENST00000553019 CLASP1Q7Z460 1538 aa31.27■■■□□ 2.6
EEA1-205ENST00000553019 OSCARQ8IYS5 282 aa31.26■■■□□ 2.59
EEA1-205ENST00000553019 EHMT2Q96KQ7 1210 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms