RNA–Protein interactions for RNA: ENST00000552774.1

PDE1B-208, Transcript of phosphodiesterase 1B, humanhuman

TSL 4

Gene PDE1B, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-208ENST00000552774 NISCHQ9Y2I1 1504 aa29.08■■■□□ 2.25
PDE1B-208ENST00000552774 CCDC180Q9P1Z9 1646 aa25.73■■□□□ 1.71
PDE1B-208ENST00000552774 ABCC9O60706 1549 aa24.91■■□□□ 1.58
PDE1B-208ENST00000552774 ZCCHC6Q5VYS8 1495 aaKnown RBP24.27■■□□□ 1.48
PDE1B-208ENST00000552774 DCAF8L2P0C7V8 631 aa24.19■■□□□ 1.46
PDE1B-208ENST00000552774 NACADO15069 1562 aa24.14■■□□□ 1.45
PDE1B-208ENST00000552774 RB1CC1Q8TDY2 1594 aa24.09■■□□□ 1.45
PDE1B-208ENST00000552774 MYO15BQ96JP2 1530 aa24.09■■□□□ 1.45
PDE1B-208ENST00000552774 DCAF1Q9Y4B6 1507 aa24.08■■□□□ 1.45
PDE1B-208ENST00000552774 UNC13AQ9UPW8 1703 aa23.53■■□□□ 1.36
PDE1B-208ENST00000552774 SCRIBQ14160 1630 aa23.48■■□□□ 1.35
PDE1B-208ENST00000552774 BICRAQ9NZM4 1560 aa23.33■■□□□ 1.33
PDE1B-208ENST00000552774 PABPN1Q86U42 306 aaKnown RBP eCLIP23.32■■□□□ 1.32
PDE1B-208ENST00000552774 SHROOM4Q9ULL8 1493 aa23.14■■□□□ 1.29
PDE1B-208ENST00000552774 EIF4G1Q04637 1599 aaKnown RBP22.71■■□□□ 1.23
PDE1B-208ENST00000552774 DNAJC5BQ9UF47 199 aa22.61■■□□□ 1.21
PDE1B-208ENST00000552774 CECR2Q9BXF3 1484 aa22.6■■□□□ 1.21
PDE1B-208ENST00000552774 CC2D2AQ9P2K1 1620 aa22.54■■□□□ 1.2
PDE1B-208ENST00000552774 BAZ1AQ9NRL2 1556 aaPredicted RBP22.52■■□□□ 1.2
PDE1B-208ENST00000552774 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
PDE1B-208ENST00000552774 MROH2BQ7Z745 1585 aa22.41■■□□□ 1.18
PDE1B-208ENST00000552774 SMARCA2P51531 1590 aa22.31■■□□□ 1.16
PDE1B-208ENST00000552774 ATAD2BQ9ULI0 1458 aa22.31■■□□□ 1.16
PDE1B-208ENST00000552774 PEG3Q9GZU2 1588 aa22.28■■□□□ 1.16
PDE1B-208ENST00000552774 NCAPD3P42695 1498 aa22.27■■□□□ 1.16
PDE1B-208ENST00000552774 RSF1Q96T23 1441 aaPredicted RBP22.26■■□□□ 1.15
PDE1B-208ENST00000552774 HMGXB3Q12766 1538 aa22.18■■□□□ 1.14
PDE1B-208ENST00000552774 WIZO95785 1651 aa22.17■■□□□ 1.14
PDE1B-208ENST00000552774 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
PDE1B-208ENST00000552774 TOP2AP11388 1531 aaKnown RBP21.96■■□□□ 1.11
PDE1B-208ENST00000552774 SUPT5HO00267 1087 aaKnown RBP21.9■■□□□ 1.1
PDE1B-208ENST00000552774 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
PDE1B-208ENST00000552774 CADPSQ9ULU8 1353 aa21.64■■□□□ 1.06
PDE1B-208ENST00000552774 LAMC3Q9Y6N6 1575 aa21.64■■□□□ 1.05
PDE1B-208ENST00000552774 NESP48681 1621 aa21.62■■□□□ 1.05
PDE1B-208ENST00000552774 CFTRP13569 1480 aa21.56■■□□□ 1.04
PDE1B-208ENST00000552774 PDS5BQ9NTI5 1447 aa21.49■■□□□ 1.03
PDE1B-208ENST00000552774 ERCC6Q03468 1493 aa21.45■■□□□ 1.03
PDE1B-208ENST00000552774 PRDM2Q13029 1718 aa21.41■■□□□ 1.02
PDE1B-208ENST00000552774 FANCD2Q9BXW9 1451 aa21.38■■□□□ 1.01
PDE1B-208ENST00000552774 KIF21AQ7Z4S6 1674 aa21.37■■□□□ 1.01
PDE1B-208ENST00000552774 CEP164Q9UPV0 1460 aa21.33■■□□□ 1.01
PDE1B-208ENST00000552774 MRC2Q9UBG0 1479 aa21.24■□□□□ 0.99
PDE1B-208ENST00000552774 THOC2Q8NI27 1593 aaKnown RBP21.23■□□□□ 0.99
PDE1B-208ENST00000552774 WDR62O43379 1518 aa21.15■□□□□ 0.98
PDE1B-208ENST00000552774 URB2Q14146 1524 aaKnown RBP21.14■□□□□ 0.97
PDE1B-208ENST00000552774 CUX2O14529 1486 aa21.13■□□□□ 0.97
PDE1B-208ENST00000552774 ABCC8Q09428 1581 aa21.1■□□□□ 0.97
PDE1B-208ENST00000552774 TOPBP1Q92547 1522 aa21.07■□□□□ 0.96
PDE1B-208ENST00000552774 DNMBPQ6XZF7 1577 aa21.06■□□□□ 0.96
PDE1B-208ENST00000552774 CUX1P39880 1505 aa21■□□□□ 0.95
PDE1B-208ENST00000552774 WRNQ14191 1432 aaPredicted RBP eCLIP20.99■□□□□ 0.95
PDE1B-208ENST00000552774 TOP2BQ02880 1626 aa20.9■□□□□ 0.94
PDE1B-208ENST00000552774 POLA1P09884 1462 aaPredicted RBP20.9■□□□□ 0.94
PDE1B-208ENST00000552774 SYNJ1O43426 1573 aa20.89■□□□□ 0.94
PDE1B-208ENST00000552774 FGD5Q6ZNL6 1462 aa20.89■□□□□ 0.94
PDE1B-208ENST00000552774 BIVM-ERCC5R4GMW8 1640 aa20.89■□□□□ 0.93
PDE1B-208ENST00000552774 IFT140Q96RY7 1462 aa20.88■□□□□ 0.93
PDE1B-208ENST00000552774 SOGA1O94964 1423 aa20.84■□□□□ 0.93
PDE1B-208ENST00000552774 TARBP1Q13395 1621 aaKnown RBP20.81■□□□□ 0.92
PDE1B-208ENST00000552774 RAD54L2Q9Y4B4 1467 aa20.81■□□□□ 0.92
PDE1B-208ENST00000552774 ZNF608Q9ULD9 1512 aaPredicted RBP20.73■□□□□ 0.91
PDE1B-208ENST00000552774 ABCA10Q8WWZ4 1543 aa20.72■□□□□ 0.91
PDE1B-208ENST00000552774 WDR97A6NE52 1622 aa20.69■□□□□ 0.9
PDE1B-208ENST00000552774 TRIM41Q8WV44 630 aa20.69■□□□□ 0.9
PDE1B-208ENST00000552774 TDRD9Q8NDG6 1382 aaKnown RBP20.68■□□□□ 0.9
PDE1B-208ENST00000552774 AQRO60306 1485 aaKnown RBP eCLIP20.67■□□□□ 0.9
PDE1B-208ENST00000552774 EIF4G3O43432 1585 aaKnown RBP20.67■□□□□ 0.9
PDE1B-208ENST00000552774 CHIC1Q5VXU3 224 aa20.61■□□□□ 0.89
PDE1B-208ENST00000552774 GAPVD1Q14C86 1478 aa20.6■□□□□ 0.89
PDE1B-208ENST00000552774 ABCA5Q8WWZ7 1642 aa20.59■□□□□ 0.89
PDE1B-208ENST00000552774 GRIN2BQ13224 1484 aa20.56■□□□□ 0.88
PDE1B-208ENST00000552774 KIF27Q86VH2 1401 aa20.53■□□□□ 0.88
PDE1B-208ENST00000552774 PBRM1Q86U86 1689 aa20.51■□□□□ 0.87
PDE1B-208ENST00000552774 SNAPC4Q5SXM2 1469 aa20.48■□□□□ 0.87
PDE1B-208ENST00000552774 MAGI1Q96QZ7 1491 aaPredicted RBP20.48■□□□□ 0.87
PDE1B-208ENST00000552774 ERICH3Q5RHP9 1530 aa20.47■□□□□ 0.87
PDE1B-208ENST00000552774 IGF1RP08069 1367 aa20.41■□□□□ 0.86
PDE1B-208ENST00000552774 RUSC2Q8N2Y8 1516 aa20.4■□□□□ 0.86
PDE1B-208ENST00000552774 SYNJ2O15056 1496 aa20.39■□□□□ 0.85
PDE1B-208ENST00000552774 FBLN2P98095 1184 aa20.38■□□□□ 0.85
PDE1B-208ENST00000552774 CHMP7Q8WUX9 453 aaPredicted RBP20.38■□□□□ 0.85
PDE1B-208ENST00000552774 ADAMTS12P58397 1594 aa20.38■□□□□ 0.85
PDE1B-208ENST00000552774 FHAD1B1AJZ9 1412 aa20.37■□□□□ 0.85
PDE1B-208ENST00000552774 CHD1O14646 1710 aa20.36■□□□□ 0.85
PDE1B-208ENST00000552774 EEA1Q15075 1411 aa20.34■□□□□ 0.85
PDE1B-208ENST00000552774 CUL7Q14999 1698 aa20.33■□□□□ 0.85
PDE1B-208ENST00000552774 OSCARQ8IYS5 282 aa20.33■□□□□ 0.85
PDE1B-208ENST00000552774 CARMIL1Q5VZK9 1371 aa20.3■□□□□ 0.84
PDE1B-208ENST00000552774 GRIN2AQ12879 1464 aa20.29■□□□□ 0.84
PDE1B-208ENST00000552774 CSRNP3Q8WYN3 585 aa20.27■□□□□ 0.84
PDE1B-208ENST00000552774 FAM9AQ8IZU1 332 aaPredicted RBP20.23■□□□□ 0.83
PDE1B-208ENST00000552774 RAPGEF2Q9Y4G8 1499 aa20.21■□□□□ 0.83
PDE1B-208ENST00000552774 PRXQ9BXM0 1461 aa20.2■□□□□ 0.82
PDE1B-208ENST00000552774 NUP160Q12769 1436 aa20.19■□□□□ 0.82
PDE1B-208ENST00000552774 DNAJC5Q9H3Z4 198 aa20.18■□□□□ 0.82
PDE1B-208ENST00000552774 CEP170Q5SW79 1584 aa20.17■□□□□ 0.82
PDE1B-208ENST00000552774 CLASP1Q7Z460 1538 aa20.14■□□□□ 0.81
PDE1B-208ENST00000552774 KIF21BO75037 1637 aa20.08■□□□□ 0.8
PDE1B-208ENST00000552774 KIAA0586Q9BVV6 1533 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms