RNA–Protein interactions for RNA: ENST00000552763.1

MMP19-208, Transcript of matrix metallopeptidase 19, humanhuman

TSL 2

Gene MMP19, Length 946 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-208ENST00000552763 NISCHQ9Y2I1 1504 aa46.34■■■■■ 5.01
MMP19-208ENST00000552763 CCDC180Q9P1Z9 1646 aa41■■■■■ 4.15
MMP19-208ENST00000552763 ABCC9O60706 1549 aa40.03■■■■■ 4
MMP19-208ENST00000552763 DCAF8L2P0C7V8 631 aa38.77■■■■□ 3.8
MMP19-208ENST00000552763 ZCCHC6Q5VYS8 1495 aaKnown RBP38.62■■■■□ 3.77
MMP19-208ENST00000552763 NACADO15069 1562 aa38.57■■■■□ 3.77
MMP19-208ENST00000552763 RB1CC1Q8TDY2 1594 aa38.55■■■■□ 3.76
MMP19-208ENST00000552763 MYO15BQ96JP2 1530 aa38.41■■■■□ 3.74
MMP19-208ENST00000552763 DCAF1Q9Y4B6 1507 aa38.33■■■■□ 3.73
MMP19-208ENST00000552763 UNC13AQ9UPW8 1703 aa37.59■■■■□ 3.61
MMP19-208ENST00000552763 PABPN1Q86U42 306 aaKnown RBP eCLIP37.53■■■■□ 3.6
MMP19-208ENST00000552763 SCRIBQ14160 1630 aa37.48■■■■□ 3.59
MMP19-208ENST00000552763 BICRAQ9NZM4 1560 aa37.38■■■■□ 3.58
MMP19-208ENST00000552763 SHROOM4Q9ULL8 1493 aa36.98■■■■□ 3.51
MMP19-208ENST00000552763 DNAJC5BQ9UF47 199 aa36.64■■■■□ 3.46
MMP19-208ENST00000552763 EIF4G1Q04637 1599 aaKnown RBP36.38■■■■□ 3.41
MMP19-208ENST00000552763 CC2D2AQ9P2K1 1620 aa36.17■■■■□ 3.38
MMP19-208ENST00000552763 CECR2Q9BXF3 1484 aa36.11■■■■□ 3.37
MMP19-208ENST00000552763 BAZ1AQ9NRL2 1556 aaPredicted RBP35.88■■■■□ 3.33
MMP19-208ENST00000552763 SMARCA4P51532 1647 aa35.86■■■■□ 3.33
MMP19-208ENST00000552763 MROH2BQ7Z745 1585 aa35.73■■■■□ 3.31
MMP19-208ENST00000552763 ATAD2BQ9ULI0 1458 aa35.68■■■■□ 3.3
MMP19-208ENST00000552763 NCAPD3P42695 1498 aa35.64■■■■□ 3.3
MMP19-208ENST00000552763 SMARCA2P51531 1590 aa35.6■■■■□ 3.29
MMP19-208ENST00000552763 PEG3Q9GZU2 1588 aa35.51■■■■□ 3.28
MMP19-208ENST00000552763 RSF1Q96T23 1441 aaPredicted RBP35.44■■■■□ 3.26
MMP19-208ENST00000552763 HMGXB3Q12766 1538 aa35.41■■■■□ 3.26
MMP19-208ENST00000552763 BAZ1BQ9UIG0 1483 aaKnown RBP35.38■■■■□ 3.25
MMP19-208ENST00000552763 WIZO95785 1651 aa35.32■■■■□ 3.24
MMP19-208ENST00000552763 TOP2AP11388 1531 aaKnown RBP34.96■■■■□ 3.19
MMP19-208ENST00000552763 SUPT5HO00267 1087 aaKnown RBP34.78■■■■□ 3.16
MMP19-208ENST00000552763 NESP48681 1621 aa34.7■■■■□ 3.15
MMP19-208ENST00000552763 CADPSQ9ULU8 1353 aa34.63■■■■□ 3.13
MMP19-208ENST00000552763 CCDC88BA6NC98 1476 aa34.61■■■■□ 3.13
MMP19-208ENST00000552763 LAMC3Q9Y6N6 1575 aa34.6■■■■□ 3.13
MMP19-208ENST00000552763 ERCC6Q03468 1493 aa34.48■■■■□ 3.11
MMP19-208ENST00000552763 CFTRP13569 1480 aa34.45■■■■□ 3.1
MMP19-208ENST00000552763 PDS5BQ9NTI5 1447 aa34.43■■■■□ 3.1
MMP19-208ENST00000552763 KIF21AQ7Z4S6 1674 aa34.21■■■■□ 3.07
MMP19-208ENST00000552763 FANCD2Q9BXW9 1451 aa34.2■■■■□ 3.07
MMP19-208ENST00000552763 CEP164Q9UPV0 1460 aa34.12■■■■□ 3.05
MMP19-208ENST00000552763 THOC2Q8NI27 1593 aaKnown RBP34.05■■■■□ 3.04
MMP19-208ENST00000552763 PRDM2Q13029 1718 aa34.04■■■■□ 3.04
MMP19-208ENST00000552763 MRC2Q9UBG0 1479 aa34.02■■■■□ 3.04
MMP19-208ENST00000552763 CUX2O14529 1486 aa34.01■■■■□ 3.04
MMP19-208ENST00000552763 WDR62O43379 1518 aa33.87■■■■□ 3.01
MMP19-208ENST00000552763 URB2Q14146 1524 aaKnown RBP33.84■■■■□ 3.01
MMP19-208ENST00000552763 ABCC8Q09428 1581 aa33.68■■■□□ 2.98
MMP19-208ENST00000552763 TOPBP1Q92547 1522 aa33.67■■■□□ 2.98
MMP19-208ENST00000552763 DNMBPQ6XZF7 1577 aa33.62■■■□□ 2.97
MMP19-208ENST00000552763 CUX1P39880 1505 aa33.49■■■□□ 2.95
MMP19-208ENST00000552763 IFT140Q96RY7 1462 aa33.41■■■□□ 2.94
MMP19-208ENST00000552763 POLA1P09884 1462 aaPredicted RBP33.4■■■□□ 2.94
MMP19-208ENST00000552763 WRNQ14191 1432 aaPredicted RBP eCLIP33.38■■■□□ 2.93
MMP19-208ENST00000552763 FGD5Q6ZNL6 1462 aa33.35■■■□□ 2.93
MMP19-208ENST00000552763 SOGA1O94964 1423 aa33.32■■■□□ 2.92
MMP19-208ENST00000552763 RAD54L2Q9Y4B4 1467 aa33.28■■■□□ 2.92
MMP19-208ENST00000552763 TARBP1Q13395 1621 aaKnown RBP33.25■■■□□ 2.91
MMP19-208ENST00000552763 ZNF608Q9ULD9 1512 aaPredicted RBP33.25■■■□□ 2.91
MMP19-208ENST00000552763 SYNJ1O43426 1573 aa33.24■■■□□ 2.91
MMP19-208ENST00000552763 TOP2BQ02880 1626 aa33.24■■■□□ 2.91
MMP19-208ENST00000552763 BIVM-ERCC5R4GMW8 1640 aa33.2■■■□□ 2.9
MMP19-208ENST00000552763 AQRO60306 1485 aaKnown RBP eCLIP33.12■■■□□ 2.89
MMP19-208ENST00000552763 TDRD9Q8NDG6 1382 aaKnown RBP33.12■■■□□ 2.89
MMP19-208ENST00000552763 EIF4G3O43432 1585 aaKnown RBP33.04■■■□□ 2.88
MMP19-208ENST00000552763 ABCA10Q8WWZ4 1543 aa33.03■■■□□ 2.88
MMP19-208ENST00000552763 WDR97A6NE52 1622 aa32.97■■■□□ 2.87
MMP19-208ENST00000552763 GAPVD1Q14C86 1478 aa32.91■■■□□ 2.86
MMP19-208ENST00000552763 GRIN2BQ13224 1484 aa32.86■■■□□ 2.85
MMP19-208ENST00000552763 TRIM41Q8WV44 630 aa32.84■■■□□ 2.85
MMP19-208ENST00000552763 ABCA5Q8WWZ7 1642 aa32.83■■■□□ 2.85
MMP19-208ENST00000552763 DNAJC5Q9H3Z4 198 aa32.82■■■□□ 2.84
MMP19-208ENST00000552763 SNAPC4Q5SXM2 1469 aa32.77■■■□□ 2.84
MMP19-208ENST00000552763 OSCARQ8IYS5 282 aa32.76■■■□□ 2.83
MMP19-208ENST00000552763 FBLN2P98095 1184 aa32.74■■■□□ 2.83
MMP19-208ENST00000552763 MAGI1Q96QZ7 1491 aaPredicted RBP32.73■■■□□ 2.83
MMP19-208ENST00000552763 PBRM1Q86U86 1689 aa32.7■■■□□ 2.83
MMP19-208ENST00000552763 KIF27Q86VH2 1401 aa32.68■■■□□ 2.82
MMP19-208ENST00000552763 CHMP7Q8WUX9 453 aaPredicted RBP32.67■■■□□ 2.82
MMP19-208ENST00000552763 ERICH3Q5RHP9 1530 aa32.63■■■□□ 2.81
MMP19-208ENST00000552763 SYNJ2O15056 1496 aa32.61■■■□□ 2.81
MMP19-208ENST00000552763 CHIC1Q5VXU3 224 aa32.59■■■□□ 2.81
MMP19-208ENST00000552763 IGF1RP08069 1367 aa32.58■■■□□ 2.81
MMP19-208ENST00000552763 CHD1O14646 1710 aa32.57■■■□□ 2.8
MMP19-208ENST00000552763 FHAD1B1AJZ9 1412 aa32.54■■■□□ 2.8
MMP19-208ENST00000552763 ADAMTS12P58397 1594 aa32.49■■■□□ 2.79
MMP19-208ENST00000552763 RUSC2Q8N2Y8 1516 aa32.46■■■□□ 2.79
MMP19-208ENST00000552763 GRIN2AQ12879 1464 aa32.42■■■□□ 2.78
MMP19-208ENST00000552763 CARMIL1Q5VZK9 1371 aa32.37■■■□□ 2.77
MMP19-208ENST00000552763 CUL7Q14999 1698 aa32.33■■■□□ 2.77
MMP19-208ENST00000552763 NUP160Q12769 1436 aa32.28■■■□□ 2.76
MMP19-208ENST00000552763 CLASP1Q7Z460 1538 aa32.26■■■□□ 2.76
MMP19-208ENST00000552763 CEP170Q5SW79 1584 aa32.23■■■□□ 2.75
MMP19-208ENST00000552763 CSRNP3Q8WYN3 585 aa32.2■■■□□ 2.75
MMP19-208ENST00000552763 EEA1Q15075 1411 aa32.18■■■□□ 2.74
MMP19-208ENST00000552763 RAPGEF2Q9Y4G8 1499 aa32.16■■■□□ 2.74
MMP19-208ENST00000552763 FAM9AQ8IZU1 332 aaPredicted RBP32.15■■■□□ 2.74
MMP19-208ENST00000552763 ARHGEF11O15085 1522 aa32.11■■■□□ 2.73
MMP19-208ENST00000552763 PRXQ9BXM0 1461 aa32.1■■■□□ 2.73
MMP19-208ENST00000552763 RIMBP3CA6NJZ7 1639 aa32.07■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms