RNA–Protein interactions for RNA: ENST00000552752.5

PFKM-227, Transcript of phosphofructokinase, muscle, humanhuman

TSL 5

Gene PFKM, Length 887 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-227ENST00000552752 NISCHQ9Y2I1 1504 aa34.28■■■■□ 3.08
PFKM-227ENST00000552752 CCDC180Q9P1Z9 1646 aa30.2■■■□□ 2.43
PFKM-227ENST00000552752 ABCC9O60706 1549 aa29.55■■■□□ 2.32
PFKM-227ENST00000552752 DCAF8L2P0C7V8 631 aa28.89■■■□□ 2.22
PFKM-227ENST00000552752 ZCCHC6Q5VYS8 1495 aaKnown RBP28.59■■■□□ 2.17
PFKM-227ENST00000552752 NACADO15069 1562 aa28.44■■■□□ 2.14
PFKM-227ENST00000552752 RB1CC1Q8TDY2 1594 aa28.42■■■□□ 2.14
PFKM-227ENST00000552752 MYO15BQ96JP2 1530 aa28.3■■■□□ 2.12
PFKM-227ENST00000552752 DCAF1Q9Y4B6 1507 aa28.29■■■□□ 2.12
PFKM-227ENST00000552752 PABPN1Q86U42 306 aaKnown RBP eCLIP27.76■■■□□ 2.03
PFKM-227ENST00000552752 SCRIBQ14160 1630 aa27.74■■■□□ 2.03
PFKM-227ENST00000552752 UNC13AQ9UPW8 1703 aa27.56■■■□□ 2
PFKM-227ENST00000552752 SHROOM4Q9ULL8 1493 aa27.49■■□□□ 1.99
PFKM-227ENST00000552752 BICRAQ9NZM4 1560 aa27.48■■□□□ 1.99
PFKM-227ENST00000552752 DNAJC5BQ9UF47 199 aa26.86■■□□□ 1.89
PFKM-227ENST00000552752 EIF4G1Q04637 1599 aaKnown RBP26.8■■□□□ 1.88
PFKM-227ENST00000552752 CECR2Q9BXF3 1484 aa26.72■■□□□ 1.87
PFKM-227ENST00000552752 CC2D2AQ9P2K1 1620 aa26.61■■□□□ 1.85
PFKM-227ENST00000552752 BAZ1AQ9NRL2 1556 aaPredicted RBP26.55■■□□□ 1.84
PFKM-227ENST00000552752 SMARCA4P51532 1647 aa26.49■■□□□ 1.83
PFKM-227ENST00000552752 MROH2BQ7Z745 1585 aa26.45■■□□□ 1.82
PFKM-227ENST00000552752 ATAD2BQ9ULI0 1458 aa26.35■■□□□ 1.81
PFKM-227ENST00000552752 SMARCA2P51531 1590 aa26.32■■□□□ 1.8
PFKM-227ENST00000552752 RSF1Q96T23 1441 aaPredicted RBP26.29■■□□□ 1.8
PFKM-227ENST00000552752 NCAPD3P42695 1498 aa26.28■■□□□ 1.8
PFKM-227ENST00000552752 BAZ1BQ9UIG0 1483 aaKnown RBP26.2■■□□□ 1.78
PFKM-227ENST00000552752 PEG3Q9GZU2 1588 aa26.17■■□□□ 1.78
PFKM-227ENST00000552752 WIZO95785 1651 aa26.12■■□□□ 1.77
PFKM-227ENST00000552752 HMGXB3Q12766 1538 aa26.11■■□□□ 1.77
PFKM-227ENST00000552752 SUPT5HO00267 1087 aaKnown RBP26.07■■□□□ 1.76
PFKM-227ENST00000552752 TOP2AP11388 1531 aaKnown RBP25.88■■□□□ 1.73
PFKM-227ENST00000552752 CCDC88BA6NC98 1476 aa25.64■■□□□ 1.69
PFKM-227ENST00000552752 CADPSQ9ULU8 1353 aa25.6■■□□□ 1.69
PFKM-227ENST00000552752 NESP48681 1621 aa25.59■■□□□ 1.69
PFKM-227ENST00000552752 LAMC3Q9Y6N6 1575 aa25.5■■□□□ 1.67
PFKM-227ENST00000552752 ERCC6Q03468 1493 aa25.49■■□□□ 1.67
PFKM-227ENST00000552752 CFTRP13569 1480 aa25.45■■□□□ 1.66
PFKM-227ENST00000552752 PDS5BQ9NTI5 1447 aa25.45■■□□□ 1.66
PFKM-227ENST00000552752 FANCD2Q9BXW9 1451 aa25.29■■□□□ 1.64
PFKM-227ENST00000552752 CEP164Q9UPV0 1460 aa25.23■■□□□ 1.63
PFKM-227ENST00000552752 KIF21AQ7Z4S6 1674 aa25.16■■□□□ 1.62
PFKM-227ENST00000552752 MRC2Q9UBG0 1479 aa25.11■■□□□ 1.61
PFKM-227ENST00000552752 PRDM2Q13029 1718 aa25.03■■□□□ 1.6
PFKM-227ENST00000552752 THOC2Q8NI27 1593 aaKnown RBP25.01■■□□□ 1.59
PFKM-227ENST00000552752 CUX2O14529 1486 aa24.98■■□□□ 1.59
PFKM-227ENST00000552752 URB2Q14146 1524 aaKnown RBP24.96■■□□□ 1.59
PFKM-227ENST00000552752 WDR62O43379 1518 aa24.94■■□□□ 1.58
PFKM-227ENST00000552752 ABCC8Q09428 1581 aa24.91■■□□□ 1.58
PFKM-227ENST00000552752 TOPBP1Q92547 1522 aa24.88■■□□□ 1.57
PFKM-227ENST00000552752 DNMBPQ6XZF7 1577 aa24.84■■□□□ 1.57
PFKM-227ENST00000552752 WRNQ14191 1432 aaPredicted RBP eCLIP24.82■■□□□ 1.56
PFKM-227ENST00000552752 CUX1P39880 1505 aa24.78■■□□□ 1.56
PFKM-227ENST00000552752 FGD5Q6ZNL6 1462 aa24.7■■□□□ 1.54
PFKM-227ENST00000552752 POLA1P09884 1462 aaPredicted RBP24.69■■□□□ 1.54
PFKM-227ENST00000552752 SOGA1O94964 1423 aa24.69■■□□□ 1.54
PFKM-227ENST00000552752 IFT140Q96RY7 1462 aa24.68■■□□□ 1.54
PFKM-227ENST00000552752 RAD54L2Q9Y4B4 1467 aa24.64■■□□□ 1.53
PFKM-227ENST00000552752 SYNJ1O43426 1573 aa24.63■■□□□ 1.53
PFKM-227ENST00000552752 TOP2BQ02880 1626 aa24.6■■□□□ 1.53
PFKM-227ENST00000552752 TRIM41Q8WV44 630 aa24.58■■□□□ 1.53
PFKM-227ENST00000552752 TDRD9Q8NDG6 1382 aaKnown RBP24.54■■□□□ 1.52
PFKM-227ENST00000552752 ZNF608Q9ULD9 1512 aaPredicted RBP24.54■■□□□ 1.52
PFKM-227ENST00000552752 BIVM-ERCC5R4GMW8 1640 aa24.53■■□□□ 1.52
PFKM-227ENST00000552752 AQRO60306 1485 aaKnown RBP eCLIP24.5■■□□□ 1.51
PFKM-227ENST00000552752 TARBP1Q13395 1621 aaKnown RBP24.49■■□□□ 1.51
PFKM-227ENST00000552752 ABCA10Q8WWZ4 1543 aa24.43■■□□□ 1.5
PFKM-227ENST00000552752 CHIC1Q5VXU3 224 aa24.39■■□□□ 1.49
PFKM-227ENST00000552752 EIF4G3O43432 1585 aaKnown RBP24.37■■□□□ 1.49
PFKM-227ENST00000552752 GAPVD1Q14C86 1478 aa24.37■■□□□ 1.49
PFKM-227ENST00000552752 FBLN2P98095 1184 aa24.33■■□□□ 1.49
PFKM-227ENST00000552752 GRIN2BQ13224 1484 aa24.32■■□□□ 1.48
PFKM-227ENST00000552752 KIF27Q86VH2 1401 aa24.3■■□□□ 1.48
PFKM-227ENST00000552752 WDR97A6NE52 1622 aa24.29■■□□□ 1.48
PFKM-227ENST00000552752 CHMP7Q8WUX9 453 aaPredicted RBP24.25■■□□□ 1.47
PFKM-227ENST00000552752 SNAPC4Q5SXM2 1469 aa24.24■■□□□ 1.47
PFKM-227ENST00000552752 ABCA5Q8WWZ7 1642 aa24.22■■□□□ 1.47
PFKM-227ENST00000552752 MAGI1Q96QZ7 1491 aaPredicted RBP24.19■■□□□ 1.46
PFKM-227ENST00000552752 OSCARQ8IYS5 282 aa24.17■■□□□ 1.46
PFKM-227ENST00000552752 IGF1RP08069 1367 aa24.14■■□□□ 1.45
PFKM-227ENST00000552752 ERICH3Q5RHP9 1530 aa24.13■■□□□ 1.45
PFKM-227ENST00000552752 FAM9AQ8IZU1 332 aaPredicted RBP24.12■■□□□ 1.45
PFKM-227ENST00000552752 PBRM1Q86U86 1689 aa24.11■■□□□ 1.45
PFKM-227ENST00000552752 RUSC2Q8N2Y8 1516 aa24.11■■□□□ 1.45
PFKM-227ENST00000552752 SYNJ2O15056 1496 aa24.1■■□□□ 1.45
PFKM-227ENST00000552752 FHAD1B1AJZ9 1412 aa24.1■■□□□ 1.45
PFKM-227ENST00000552752 CARMIL1Q5VZK9 1371 aa24.04■■□□□ 1.44
PFKM-227ENST00000552752 CSRNP3Q8WYN3 585 aa24.02■■□□□ 1.44
PFKM-227ENST00000552752 ADAMTS12P58397 1594 aa24.01■■□□□ 1.43
PFKM-227ENST00000552752 DNAJC5Q9H3Z4 198 aa23.99■■□□□ 1.43
PFKM-227ENST00000552752 EEA1Q15075 1411 aa23.98■■□□□ 1.43
PFKM-227ENST00000552752 GRIN2AQ12879 1464 aa23.98■■□□□ 1.43
PFKM-227ENST00000552752 CHD1O14646 1710 aa23.95■■□□□ 1.42
PFKM-227ENST00000552752 CUL7Q14999 1698 aa23.92■■□□□ 1.42
PFKM-227ENST00000552752 RAPGEF2Q9Y4G8 1499 aa23.88■■□□□ 1.41
PFKM-227ENST00000552752 EHMT2Q96KQ7 1210 aa23.85■■□□□ 1.41
PFKM-227ENST00000552752 NUP160Q12769 1436 aa23.83■■□□□ 1.4
PFKM-227ENST00000552752 PRXQ9BXM0 1461 aa23.81■■□□□ 1.4
PFKM-227ENST00000552752 CEP170Q5SW79 1584 aa23.78■■□□□ 1.4
PFKM-227ENST00000552752 CLASP1Q7Z460 1538 aa23.74■■□□□ 1.39
PFKM-227ENST00000552752 JPH4Q96JJ6 628 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms