RNA–Protein interactions for RNA: ENST00000551743.5

PACS2-212, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 5

Gene PACS2, Length 1,876 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-212ENST00000551743 NISCHQ9Y2I1 1504 aa38.1■■■■□ 3.69
PACS2-212ENST00000551743 CCDC180Q9P1Z9 1646 aa33.26■■■□□ 2.92
PACS2-212ENST00000551743 ZCCHC6Q5VYS8 1495 aaKnown RBP31.98■■■□□ 2.71
PACS2-212ENST00000551743 ABCC9O60706 1549 aa31.66■■■□□ 2.66
PACS2-212ENST00000551743 DCAF1Q9Y4B6 1507 aa31.5■■■□□ 2.63
PACS2-212ENST00000551743 DCAF8L2P0C7V8 631 aa31.42■■■□□ 2.62
PACS2-212ENST00000551743 MYO15BQ96JP2 1530 aa31.21■■■□□ 2.59
PACS2-212ENST00000551743 NACADO15069 1562 aa31.04■■■□□ 2.56
PACS2-212ENST00000551743 SHROOM4Q9ULL8 1493 aa30.9■■■□□ 2.54
PACS2-212ENST00000551743 RB1CC1Q8TDY2 1594 aa30.8■■■□□ 2.52
PACS2-212ENST00000551743 SCRIBQ14160 1630 aa30.58■■■□□ 2.49
PACS2-212ENST00000551743 UNC13AQ9UPW8 1703 aa30.18■■■□□ 2.42
PACS2-212ENST00000551743 BICRAQ9NZM4 1560 aa29.96■■■□□ 2.39
PACS2-212ENST00000551743 PABPN1Q86U42 306 aaKnown RBP eCLIP29.82■■■□□ 2.361e-6■■■■□ 24.5
PACS2-212ENST00000551743 SUPT5HO00267 1087 aaKnown RBP29.72■■■□□ 2.35
PACS2-212ENST00000551743 CECR2Q9BXF3 1484 aa29.65■■■□□ 2.34
PACS2-212ENST00000551743 RSF1Q96T23 1441 aaPredicted RBP29.5■■■□□ 2.31
PACS2-212ENST00000551743 MROH2BQ7Z745 1585 aa29.45■■■□□ 2.3
PACS2-212ENST00000551743 BAZ1AQ9NRL2 1556 aaPredicted RBP29.4■■■□□ 2.3
PACS2-212ENST00000551743 SMARCA4P51532 1647 aa29.31■■■□□ 2.28
PACS2-212ENST00000551743 CHIC1Q5VXU3 224 aa29.22■■■□□ 2.27
PACS2-212ENST00000551743 WIZO95785 1651 aa29.15■■■□□ 2.26
PACS2-212ENST00000551743 EIF4G1Q04637 1599 aaKnown RBP29.03■■■□□ 2.24
PACS2-212ENST00000551743 PEG3Q9GZU2 1588 aa28.99■■■□□ 2.23
PACS2-212ENST00000551743 ATAD2BQ9ULI0 1458 aa28.91■■■□□ 2.22
PACS2-212ENST00000551743 TOP2AP11388 1531 aaKnown RBP28.85■■■□□ 2.21
PACS2-212ENST00000551743 SMARCA2P51531 1590 aa28.83■■■□□ 2.21
PACS2-212ENST00000551743 HRCP23327 699 aa28.7■■■□□ 2.18
PACS2-212ENST00000551743 NCAPD3P42695 1498 aa28.69■■■□□ 2.18
PACS2-212ENST00000551743 BAZ1BQ9UIG0 1483 aaKnown RBP28.68■■■□□ 2.18
PACS2-212ENST00000551743 CC2D2AQ9P2K1 1620 aa28.64■■■□□ 2.18
PACS2-212ENST00000551743 HMGXB3Q12766 1538 aa28.61■■■□□ 2.17
PACS2-212ENST00000551743 CCDC88BA6NC98 1476 aa28.57■■■□□ 2.16
PACS2-212ENST00000551743 PCGF6Q9BYE7 350 aa28.33■■■□□ 2.13
PACS2-212ENST00000551743 DNAJC5BQ9UF47 199 aa28.17■■■□□ 2.1
PACS2-212ENST00000551743 LOC105371045A0A1W2PR82 267 aa28.12■■■□□ 2.09
PACS2-212ENST00000551743 TRIM26Q12899 539 aaPredicted RBP28.04■■■□□ 2.08
PACS2-212ENST00000551743 CFTRP13569 1480 aa28■■■□□ 2.07
PACS2-212ENST00000551743 CADPSQ9ULU8 1353 aa27.92■■■□□ 2.06
PACS2-212ENST00000551743 ABCC8Q09428 1581 aa27.9■■■□□ 2.06
PACS2-212ENST00000551743 TRIM41Q8WV44 630 aa27.88■■■□□ 2.05
PACS2-212ENST00000551743 NESP48681 1621 aa27.77■■■□□ 2.04
PACS2-212ENST00000551743 PRDM2Q13029 1718 aa27.74■■■□□ 2.03
PACS2-212ENST00000551743 WRNQ14191 1432 aaPredicted RBP eCLIP27.73■■■□□ 2.03
PACS2-212ENST00000551743 ZEB1P37275 1124 aaPredicted RBP27.71■■■□□ 2.03
PACS2-212ENST00000551743 LAMC3Q9Y6N6 1575 aa27.7■■■□□ 2.02
PACS2-212ENST00000551743 PPARGC1BQ86YN6 1023 aaKnown RBP27.68■■■□□ 2.02
PACS2-212ENST00000551743 SYNJ1O43426 1573 aa27.65■■■□□ 2.02
PACS2-212ENST00000551743 FANCD2Q9BXW9 1451 aa27.61■■■□□ 2.01
PACS2-212ENST00000551743 CUX1P39880 1505 aa27.55■■■□□ 2
PACS2-212ENST00000551743 TOP2BQ02880 1626 aa27.53■■■□□ 2
PACS2-212ENST00000551743 BIVM-ERCC5R4GMW8 1640 aa27.5■■□□□ 1.99
PACS2-212ENST00000551743 PDS5BQ9NTI5 1447 aa27.48■■□□□ 1.99
PACS2-212ENST00000551743 CEP164Q9UPV0 1460 aa27.43■■□□□ 1.98
PACS2-212ENST00000551743 KIF21AQ7Z4S6 1674 aa27.37■■□□□ 1.97
PACS2-212ENST00000551743 FAM9AQ8IZU1 332 aaPredicted RBP27.36■■□□□ 1.97
PACS2-212ENST00000551743 SOGA1O94964 1423 aa27.35■■□□□ 1.97
PACS2-212ENST00000551743 DNMBPQ6XZF7 1577 aa27.31■■□□□ 1.96
PACS2-212ENST00000551743 URB2Q14146 1524 aaKnown RBP27.31■■□□□ 1.96
PACS2-212ENST00000551743 TOPBP1Q92547 1522 aa27.29■■□□□ 1.96
PACS2-212ENST00000551743 RUSC2Q8N2Y8 1516 aa27.28■■□□□ 1.96
PACS2-212ENST00000551743 FGD5Q6ZNL6 1462 aa27.24■■□□□ 1.95
PACS2-212ENST00000551743 EEA1Q15075 1411 aa27.19■■□□□ 1.94
PACS2-212ENST00000551743 MRC2Q9UBG0 1479 aa27.17■■□□□ 1.94
PACS2-212ENST00000551743 POLA1P09884 1462 aaPredicted RBP27.16■■□□□ 1.94
PACS2-212ENST00000551743 ERCC6Q03468 1493 aa27.1■■□□□ 1.93
PACS2-212ENST00000551743 CSRNP3Q8WYN3 585 aa27.08■■□□□ 1.93
PACS2-212ENST00000551743 RAD54L2Q9Y4B4 1467 aa27.07■■□□□ 1.92
PACS2-212ENST00000551743 WDR62O43379 1518 aa27.05■■□□□ 1.92
PACS2-212ENST00000551743 THOC2Q8NI27 1593 aaKnown RBP27.02■■□□□ 1.92
PACS2-212ENST00000551743 KIF27Q86VH2 1401 aa27.02■■□□□ 1.92
PACS2-212ENST00000551743 CUX2O14529 1486 aa27.02■■□□□ 1.92
PACS2-212ENST00000551743 ABCA10Q8WWZ4 1543 aa27.01■■□□□ 1.91
PACS2-212ENST00000551743 EHMT2Q96KQ7 1210 aa26.93■■□□□ 1.9
PACS2-212ENST00000551743 WDR97A6NE52 1622 aa26.93■■□□□ 1.9
PACS2-212ENST00000551743 TARBP1Q13395 1621 aaKnown RBP26.92■■□□□ 1.9
PACS2-212ENST00000551743 KIF21BO75037 1637 aa26.87■■□□□ 1.89
PACS2-212ENST00000551743 TNIKQ9UKE5 1360 aa26.87■■□□□ 1.89
PACS2-212ENST00000551743 IGF1RP08069 1367 aa26.86■■□□□ 1.89
PACS2-212ENST00000551743 PRXQ9BXM0 1461 aa26.86■■□□□ 1.89
PACS2-212ENST00000551743 GOLGA3Q08378 1498 aa26.82■■□□□ 1.88
PACS2-212ENST00000551743 TDRD9Q8NDG6 1382 aaKnown RBP26.81■■□□□ 1.88
PACS2-212ENST00000551743 ABCA5Q8WWZ7 1642 aa26.81■■□□□ 1.88
PACS2-212ENST00000551743 IFT140Q96RY7 1462 aa26.8■■□□□ 1.88
PACS2-212ENST00000551743 RAPGEF2Q9Y4G8 1499 aa26.8■■□□□ 1.88
PACS2-212ENST00000551743 CEP162Q5TB80 1403 aa26.78■■□□□ 1.88
PACS2-212ENST00000551743 GAPVD1Q14C86 1478 aa26.74■■□□□ 1.87
PACS2-212ENST00000551743 ERICH3Q5RHP9 1530 aa26.74■■□□□ 1.87
PACS2-212ENST00000551743 ZNF608Q9ULD9 1512 aaPredicted RBP26.7■■□□□ 1.87
PACS2-212ENST00000551743 CARMIL1Q5VZK9 1371 aa26.68■■□□□ 1.86
PACS2-212ENST00000551743 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.86
PACS2-212ENST00000551743 CCER1Q8TC90 406 aaPredicted RBP26.66■■□□□ 1.86
PACS2-212ENST00000551743 UBTFP17480 764 aaKnown RBP26.66■■□□□ 1.86
PACS2-212ENST00000551743 CUL7Q14999 1698 aa26.6■■□□□ 1.85
PACS2-212ENST00000551743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.57■■□□□ 1.84
PACS2-212ENST00000551743 EIF4G3O43432 1585 aaKnown RBP26.57■■□□□ 1.84
PACS2-212ENST00000551743 PBRM1Q86U86 1689 aa26.56■■□□□ 1.84
PACS2-212ENST00000551743 GRIN2BQ13224 1484 aa26.56■■□□□ 1.84
PACS2-212ENST00000551743 PELP1Q8IZL8 1130 aaKnown RBP26.53■■□□□ 1.84
PACS2-212ENST00000551743 ADAMTS12P58397 1594 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms