RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 NISCHQ9Y2I1 1504 aa17.61■□□□□ 0.41
RAB3IP-215ENST00000551641 CCDC180Q9P1Z9 1646 aa15.27■□□□□ 0.03
RAB3IP-215ENST00000551641 DCAF8L2P0C7V8 631 aa15.16■□□□□ 0.02
RAB3IP-215ENST00000551641 AEBP2Q6ZN18 517 aaPredicted RBP15.1■□□□□ 0.01
RAB3IP-215ENST00000551641 ABCC9O60706 1549 aa15.05■□□□□ 0
RAB3IP-215ENST00000551641 ZCCHC6Q5VYS8 1495 aaKnown RBP14.71□□□□□ -0.05
RAB3IP-215ENST00000551641 CHIC1Q5VXU3 224 aa14.69□□□□□ -0.06
RAB3IP-215ENST00000551641 SHROOM4Q9ULL8 1493 aa14.68□□□□□ -0.06
RAB3IP-215ENST00000551641 NACADO15069 1562 aa14.35□□□□□ -0.11
RAB3IP-215ENST00000551641 DCAF1Q9Y4B6 1507 aa14.35□□□□□ -0.11
RAB3IP-215ENST00000551641 RB1CC1Q8TDY2 1594 aa14.34□□□□□ -0.11
RAB3IP-215ENST00000551641 SCRIBQ14160 1630 aa14.34□□□□□ -0.11
RAB3IP-215ENST00000551641 PABPN1Q86U42 306 aaKnown RBP eCLIP14.29□□□□□ -0.12
RAB3IP-215ENST00000551641 MYO15BQ96JP2 1530 aa14.21□□□□□ -0.13
RAB3IP-215ENST00000551641 SUPT5HO00267 1087 aaKnown RBP14.03□□□□□ -0.16
RAB3IP-215ENST00000551641 UNC13AQ9UPW8 1703 aa14.03□□□□□ -0.16
RAB3IP-215ENST00000551641 BICRAQ9NZM4 1560 aa13.92□□□□□ -0.18
RAB3IP-215ENST00000551641 CECR2Q9BXF3 1484 aa13.85□□□□□ -0.19
RAB3IP-215ENST00000551641 MROH2BQ7Z745 1585 aa13.69□□□□□ -0.22
RAB3IP-215ENST00000551641 RSF1Q96T23 1441 aaPredicted RBP13.66□□□□□ -0.22
RAB3IP-215ENST00000551641 BAZ1AQ9NRL2 1556 aaPredicted RBP13.59□□□□□ -0.23
RAB3IP-215ENST00000551641 WIZO95785 1651 aa13.57□□□□□ -0.24
RAB3IP-215ENST00000551641 SMARCA4P51532 1647 aa13.57□□□□□ -0.24
RAB3IP-215ENST00000551641 EIF4G1Q04637 1599 aaKnown RBP13.57□□□□□ -0.24
RAB3IP-215ENST00000551641 DNAJC5BQ9UF47 199 aa13.53□□□□□ -0.24
RAB3IP-215ENST00000551641 CC2D2AQ9P2K1 1620 aa13.45□□□□□ -0.26
RAB3IP-215ENST00000551641 ATAD2BQ9ULI0 1458 aa13.45□□□□□ -0.26
RAB3IP-215ENST00000551641 BAZ1BQ9UIG0 1483 aaKnown RBP13.41□□□□□ -0.26
RAB3IP-215ENST00000551641 SMARCA2P51531 1590 aa13.36□□□□□ -0.27
RAB3IP-215ENST00000551641 TOP2AP11388 1531 aaKnown RBP13.31□□□□□ -0.28
RAB3IP-215ENST00000551641 NCAPD3P42695 1498 aa13.29□□□□□ -0.28
RAB3IP-215ENST00000551641 CCDC88BA6NC98 1476 aa13.28□□□□□ -0.28
RAB3IP-215ENST00000551641 SENP3Q9H4L4 574 aaPredicted RBP13.26□□□□□ -0.29
RAB3IP-215ENST00000551641 PEG3Q9GZU2 1588 aa13.26□□□□□ -0.29
RAB3IP-215ENST00000551641 HRCP23327 699 aa13.21□□□□□ -0.3
RAB3IP-215ENST00000551641 HMGXB3Q12766 1538 aa13.2□□□□□ -0.3
RAB3IP-215ENST00000551641 LOC105371045A0A1W2PR82 267 aa13.15□□□□□ -0.3
RAB3IP-215ENST00000551641 NESP48681 1621 aa13.12□□□□□ -0.31
RAB3IP-215ENST00000551641 PCGF6Q9BYE7 350 aa13.11□□□□□ -0.31
RAB3IP-215ENST00000551641 TRIM41Q8WV44 630 aa13.07□□□□□ -0.32
RAB3IP-215ENST00000551641 EHMT2Q96KQ7 1210 aa13.05□□□□□ -0.32
RAB3IP-215ENST00000551641 FAM9AQ8IZU1 332 aaPredicted RBP13.04□□□□□ -0.32
RAB3IP-215ENST00000551641 CADPSQ9ULU8 1353 aa13.04□□□□□ -0.32
RAB3IP-215ENST00000551641 ABCC8Q09428 1581 aa13.03□□□□□ -0.32
RAB3IP-215ENST00000551641 CFTRP13569 1480 aa12.97□□□□□ -0.33
RAB3IP-215ENST00000551641 TRIM26Q12899 539 aaPredicted RBP12.97□□□□□ -0.33
RAB3IP-215ENST00000551641 FANCD2Q9BXW9 1451 aa12.92□□□□□ -0.34
RAB3IP-215ENST00000551641 ERCC6Q03468 1493 aa12.91□□□□□ -0.34
RAB3IP-215ENST00000551641 WRNQ14191 1432 aaPredicted RBP eCLIP12.89□□□□□ -0.35
RAB3IP-215ENST00000551641 PHF23Q9BUL5 403 aaPredicted RBP12.88□□□□□ -0.35
RAB3IP-215ENST00000551641 PDS5BQ9NTI5 1447 aa12.87□□□□□ -0.35
RAB3IP-215ENST00000551641 LAMC3Q9Y6N6 1575 aa12.86□□□□□ -0.35
RAB3IP-215ENST00000551641 CEP164Q9UPV0 1460 aa12.84□□□□□ -0.35
RAB3IP-215ENST00000551641 KIF21AQ7Z4S6 1674 aa12.82□□□□□ -0.36
RAB3IP-215ENST00000551641 SYNJ1O43426 1573 aa12.82□□□□□ -0.36
RAB3IP-215ENST00000551641 PPARGC1BQ86YN6 1023 aaKnown RBP12.81□□□□□ -0.36
RAB3IP-215ENST00000551641 CUX1P39880 1505 aa12.79□□□□□ -0.36
RAB3IP-215ENST00000551641 SOGA1O94964 1423 aa12.75□□□□□ -0.37
RAB3IP-215ENST00000551641 URB2Q14146 1524 aaKnown RBP12.75□□□□□ -0.37
RAB3IP-215ENST00000551641 PRDM2Q13029 1718 aa12.74□□□□□ -0.37
RAB3IP-215ENST00000551641 RUSC2Q8N2Y8 1516 aa12.73□□□□□ -0.37
RAB3IP-215ENST00000551641 RAD54L2Q9Y4B4 1467 aa12.73□□□□□ -0.37
RAB3IP-215ENST00000551641 TOPBP1Q92547 1522 aa12.72□□□□□ -0.37
RAB3IP-215ENST00000551641 FGD5Q6ZNL6 1462 aa12.72□□□□□ -0.37
RAB3IP-215ENST00000551641 ZEB1P37275 1124 aaPredicted RBP12.71□□□□□ -0.37
RAB3IP-215ENST00000551641 RANGAP1P46060 587 aaPredicted RBP12.71□□□□□ -0.37
RAB3IP-215ENST00000551641 MRC2Q9UBG0 1479 aa12.7□□□□□ -0.38
RAB3IP-215ENST00000551641 TOP2BQ02880 1626 aa12.68□□□□□ -0.38
RAB3IP-215ENST00000551641 TDRD9Q8NDG6 1382 aaKnown RBP12.68□□□□□ -0.38
RAB3IP-215ENST00000551641 POLA1P09884 1462 aaPredicted RBP12.66□□□□□ -0.38
RAB3IP-215ENST00000551641 DNMBPQ6XZF7 1577 aa12.66□□□□□ -0.38
RAB3IP-215ENST00000551641 CUX2O14529 1486 aa12.65□□□□□ -0.38
RAB3IP-215ENST00000551641 EEA1Q15075 1411 aa12.64□□□□□ -0.39
RAB3IP-215ENST00000551641 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
RAB3IP-215ENST00000551641 BIVM-ERCC5R4GMW8 1640 aa12.62□□□□□ -0.39
RAB3IP-215ENST00000551641 UBTFP17480 764 aaKnown RBP12.62□□□□□ -0.39
RAB3IP-215ENST00000551641 FBLN2P98095 1184 aa12.61□□□□□ -0.39
RAB3IP-215ENST00000551641 AQRO60306 1485 aaKnown RBP eCLIP12.6□□□□□ -0.39
RAB3IP-215ENST00000551641 THOC2Q8NI27 1593 aaKnown RBP12.58□□□□□ -0.4
RAB3IP-215ENST00000551641 TNIKQ9UKE5 1360 aa12.58□□□□□ -0.4
RAB3IP-215ENST00000551641 ZNF608Q9ULD9 1512 aaPredicted RBP12.57□□□□□ -0.4
RAB3IP-215ENST00000551641 KIF27Q86VH2 1401 aa12.57□□□□□ -0.4
RAB3IP-215ENST00000551641 WDR62O43379 1518 aa12.56□□□□□ -0.4
RAB3IP-215ENST00000551641 CEP162Q5TB80 1403 aa12.55□□□□□ -0.4
RAB3IP-215ENST00000551641 GOLGA3Q08378 1498 aa12.5□□□□□ -0.41
RAB3IP-215ENST00000551641 GAPVD1Q14C86 1478 aa12.5□□□□□ -0.41
RAB3IP-215ENST00000551641 IGF1RP08069 1367 aa12.49□□□□□ -0.41
RAB3IP-215ENST00000551641 IFT140Q96RY7 1462 aa12.49□□□□□ -0.41
RAB3IP-215ENST00000551641 ABCA10Q8WWZ4 1543 aa12.49□□□□□ -0.41
RAB3IP-215ENST00000551641 TTBK1Q5TCY1 1321 aaPredicted RBP12.47□□□□□ -0.41
RAB3IP-215ENST00000551641 TARBP1Q13395 1621 aaKnown RBP12.47□□□□□ -0.41
RAB3IP-215ENST00000551641 CARMIL1Q5VZK9 1371 aa12.46□□□□□ -0.41
RAB3IP-215ENST00000551641 KIF21BO75037 1637 aa12.46□□□□□ -0.41
RAB3IP-215ENST00000551641 RAPGEF2Q9Y4G8 1499 aa12.46□□□□□ -0.41
RAB3IP-215ENST00000551641 CHMP7Q8WUX9 453 aaPredicted RBP12.45□□□□□ -0.42
RAB3IP-215ENST00000551641 P3H3Q8IVL6 736 aa12.43□□□□□ -0.42
RAB3IP-215ENST00000551641 EIF4G3O43432 1585 aaKnown RBP12.41□□□□□ -0.42
RAB3IP-215ENST00000551641 SNAPC4Q5SXM2 1469 aa12.4□□□□□ -0.42
RAB3IP-215ENST00000551641 GRIN2BQ13224 1484 aa12.39□□□□□ -0.43
RAB3IP-215ENST00000551641 WDR97A6NE52 1622 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms