RNA–Protein interactions for RNA: ENST00000550663.1

RACGAP1P-201, Transcript of Rac GTPase activating protein 1 pseudogene, humanhuman

BASIC

Gene RACGAP1P, Length 1,879 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1P-201ENST00000550663 NISCHQ9Y2I1 1504 aa15.73■□□□□ 0.11
RACGAP1P-201ENST00000550663 AEBP2Q6ZN18 517 aaPredicted RBP13.84□□□□□ -0.19
RACGAP1P-201ENST00000550663 CCDC180Q9P1Z9 1646 aa13.67□□□□□ -0.22
RACGAP1P-201ENST00000550663 CHIC1Q5VXU3 224 aa13.41□□□□□ -0.26
RACGAP1P-201ENST00000550663 ZCCHC6Q5VYS8 1495 aaKnown RBP13.19□□□□□ -0.3
RACGAP1P-201ENST00000550663 ABCC9O60706 1549 aa13.14□□□□□ -0.31
RACGAP1P-201ENST00000550663 DCAF8L2P0C7V8 631 aa13.04□□□□□ -0.32
RACGAP1P-201ENST00000550663 DCAF1Q9Y4B6 1507 aa12.94□□□□□ -0.34
RACGAP1P-201ENST00000550663 SHROOM4Q9ULL8 1493 aa12.84□□□□□ -0.35
RACGAP1P-201ENST00000550663 MYO15BQ96JP2 1530 aa12.8□□□□□ -0.36
RACGAP1P-201ENST00000550663 NACADO15069 1562 aa12.77□□□□□ -0.37
RACGAP1P-201ENST00000550663 RB1CC1Q8TDY2 1594 aa12.68□□□□□ -0.38
RACGAP1P-201ENST00000550663 SCRIBQ14160 1630 aa12.66□□□□□ -0.38
RACGAP1P-201ENST00000550663 UNC13AQ9UPW8 1703 aa12.53□□□□□ -0.4
RACGAP1P-201ENST00000550663 BICRAQ9NZM4 1560 aa12.42□□□□□ -0.42
RACGAP1P-201ENST00000550663 PABPN1Q86U42 306 aaKnown RBP eCLIP12.41□□□□□ -0.42
RACGAP1P-201ENST00000550663 CECR2Q9BXF3 1484 aa12.31□□□□□ -0.44
RACGAP1P-201ENST00000550663 SUPT5HO00267 1087 aaKnown RBP12.27□□□□□ -0.45
RACGAP1P-201ENST00000550663 RSF1Q96T23 1441 aaPredicted RBP12.2□□□□□ -0.46
RACGAP1P-201ENST00000550663 MROH2BQ7Z745 1585 aa12.2□□□□□ -0.46
RACGAP1P-201ENST00000550663 SMARCA4P51532 1647 aa12.1□□□□□ -0.47
RACGAP1P-201ENST00000550663 BAZ1AQ9NRL2 1556 aaPredicted RBP12.09□□□□□ -0.47
RACGAP1P-201ENST00000550663 WIZO95785 1651 aa12.08□□□□□ -0.48
RACGAP1P-201ENST00000550663 EIF4G1Q04637 1599 aaKnown RBP12□□□□□ -0.49
RACGAP1P-201ENST00000550663 SENP3Q9H4L4 574 aaPredicted RBP11.95□□□□□ -0.5
RACGAP1P-201ENST00000550663 ATAD2BQ9ULI0 1458 aa11.94□□□□□ -0.5
RACGAP1P-201ENST00000550663 PEG3Q9GZU2 1588 aa11.93□□□□□ -0.5
RACGAP1P-201ENST00000550663 TOP2AP11388 1531 aaKnown RBP11.89□□□□□ -0.51
RACGAP1P-201ENST00000550663 CC2D2AQ9P2K1 1620 aa11.86□□□□□ -0.51
RACGAP1P-201ENST00000550663 SMARCA2P51531 1590 aa11.85□□□□□ -0.51
RACGAP1P-201ENST00000550663 NCAPD3P42695 1498 aa11.83□□□□□ -0.52
RACGAP1P-201ENST00000550663 CCDC88BA6NC98 1476 aa11.82□□□□□ -0.52
RACGAP1P-201ENST00000550663 BAZ1BQ9UIG0 1483 aaKnown RBP11.82□□□□□ -0.52
RACGAP1P-201ENST00000550663 DNAJC5BQ9UF47 199 aa11.79□□□□□ -0.52
RACGAP1P-201ENST00000550663 HMGXB3Q12766 1538 aa11.77□□□□□ -0.53
RACGAP1P-201ENST00000550663 PHF23Q9BUL5 403 aaPredicted RBP11.75□□□□□ -0.53
RACGAP1P-201ENST00000550663 ABCC8Q09428 1581 aa11.57□□□□□ -0.56
RACGAP1P-201ENST00000550663 CFTRP13569 1480 aa11.54□□□□□ -0.56
RACGAP1P-201ENST00000550663 NESP48681 1621 aa11.54□□□□□ -0.56
RACGAP1P-201ENST00000550663 CADPSQ9ULU8 1353 aa11.52□□□□□ -0.57
RACGAP1P-201ENST00000550663 TRIM41Q8WV44 630 aa11.48□□□□□ -0.57
RACGAP1P-201ENST00000550663 SYNJ1O43426 1573 aa11.44□□□□□ -0.58
RACGAP1P-201ENST00000550663 PRDM2Q13029 1718 aa11.43□□□□□ -0.58
RACGAP1P-201ENST00000550663 WRNQ14191 1432 aaPredicted RBP eCLIP11.43□□□□□ -0.58
RACGAP1P-201ENST00000550663 LAMC3Q9Y6N6 1575 aa11.4□□□□□ -0.58
RACGAP1P-201ENST00000550663 CUX1P39880 1505 aa11.4□□□□□ -0.58
RACGAP1P-201ENST00000550663 FANCD2Q9BXW9 1451 aa11.4□□□□□ -0.58
RACGAP1P-201ENST00000550663 FAM9AQ8IZU1 332 aaPredicted RBP11.36□□□□□ -0.59
RACGAP1P-201ENST00000550663 RUSC2Q8N2Y8 1516 aa11.35□□□□□ -0.59
RACGAP1P-201ENST00000550663 KIF21AQ7Z4S6 1674 aa11.35□□□□□ -0.59
RACGAP1P-201ENST00000550663 TOP2BQ02880 1626 aa11.34□□□□□ -0.59
RACGAP1P-201ENST00000550663 BIVM-ERCC5R4GMW8 1640 aa11.34□□□□□ -0.59
RACGAP1P-201ENST00000550663 SOGA1O94964 1423 aa11.33□□□□□ -0.59
RACGAP1P-201ENST00000550663 LOC105371045A0A1W2PR82 267 aa11.32□□□□□ -0.6
RACGAP1P-201ENST00000550663 URB2Q14146 1524 aaKnown RBP11.31□□□□□ -0.6
RACGAP1P-201ENST00000550663 PDS5BQ9NTI5 1447 aa11.3□□□□□ -0.6
RACGAP1P-201ENST00000550663 CEP164Q9UPV0 1460 aa11.3□□□□□ -0.6
RACGAP1P-201ENST00000550663 TOPBP1Q92547 1522 aa11.28□□□□□ -0.6
RACGAP1P-201ENST00000550663 FGD5Q6ZNL6 1462 aa11.26□□□□□ -0.61
RACGAP1P-201ENST00000550663 DNMBPQ6XZF7 1577 aa11.26□□□□□ -0.61
RACGAP1P-201ENST00000550663 EHMT2Q96KQ7 1210 aa11.23□□□□□ -0.61
RACGAP1P-201ENST00000550663 RAD54L2Q9Y4B4 1467 aa11.23□□□□□ -0.61
RACGAP1P-201ENST00000550663 POLA1P09884 1462 aaPredicted RBP11.23□□□□□ -0.61
RACGAP1P-201ENST00000550663 MRC2Q9UBG0 1479 aa11.2□□□□□ -0.62
RACGAP1P-201ENST00000550663 ERCC6Q03468 1493 aa11.18□□□□□ -0.62
RACGAP1P-201ENST00000550663 CSRNP3Q8WYN3 585 aa11.18□□□□□ -0.62
RACGAP1P-201ENST00000550663 THOC2Q8NI27 1593 aaKnown RBP11.17□□□□□ -0.62
RACGAP1P-201ENST00000550663 CUX2O14529 1486 aa11.16□□□□□ -0.62
RACGAP1P-201ENST00000550663 WDR62O43379 1518 aa11.15□□□□□ -0.62
RACGAP1P-201ENST00000550663 EEA1Q15075 1411 aa11.13□□□□□ -0.63
RACGAP1P-201ENST00000550663 ABCA10Q8WWZ4 1543 aa11.13□□□□□ -0.63
RACGAP1P-201ENST00000550663 TARBP1Q13395 1621 aaKnown RBP11.13□□□□□ -0.63
RACGAP1P-201ENST00000550663 WDR97A6NE52 1622 aa11.12□□□□□ -0.63
RACGAP1P-201ENST00000550663 KIF27Q86VH2 1401 aa11.12□□□□□ -0.63
RACGAP1P-201ENST00000550663 IGF1RP08069 1367 aa11.11□□□□□ -0.63
RACGAP1P-201ENST00000550663 TDRD9Q8NDG6 1382 aaKnown RBP11.11□□□□□ -0.63
RACGAP1P-201ENST00000550663 ZNF608Q9ULD9 1512 aaPredicted RBP11.09□□□□□ -0.63
RACGAP1P-201ENST00000550663 RAPGEF2Q9Y4G8 1499 aa11.09□□□□□ -0.63
RACGAP1P-201ENST00000550663 PRXQ9BXM0 1461 aa11.08□□□□□ -0.64
RACGAP1P-201ENST00000550663 AQRO60306 1485 aaKnown RBP eCLIP11.06□□□□□ -0.64
RACGAP1P-201ENST00000550663 ABCA5Q8WWZ7 1642 aa11.06□□□□□ -0.64
RACGAP1P-201ENST00000550663 KIF21BO75037 1637 aa11.05□□□□□ -0.64
RACGAP1P-201ENST00000550663 IFT140Q96RY7 1462 aa11.04□□□□□ -0.64
RACGAP1P-201ENST00000550663 GOLGA3Q08378 1498 aa11.03□□□□□ -0.64
RACGAP1P-201ENST00000550663 GAPVD1Q14C86 1478 aa11.03□□□□□ -0.64
RACGAP1P-201ENST00000550663 FOXD1Q16676 465 aa11.02□□□□□ -0.65
RACGAP1P-201ENST00000550663 CARMIL1Q5VZK9 1371 aa11.02□□□□□ -0.65
RACGAP1P-201ENST00000550663 TNIKQ9UKE5 1360 aa11□□□□□ -0.65
RACGAP1P-201ENST00000550663 UBTFP17480 764 aaKnown RBP11□□□□□ -0.65
RACGAP1P-201ENST00000550663 ERICH3Q5RHP9 1530 aa10.98□□□□□ -0.65
RACGAP1P-201ENST00000550663 EIF4G3O43432 1585 aaKnown RBP10.98□□□□□ -0.65
RACGAP1P-201ENST00000550663 PBRM1Q86U86 1689 aa10.97□□□□□ -0.65
RACGAP1P-201ENST00000550663 CEP162Q5TB80 1403 aa10.95□□□□□ -0.66
RACGAP1P-201ENST00000550663 GRIN2BQ13224 1484 aa10.94□□□□□ -0.66
RACGAP1P-201ENST00000550663 RANGAP1P46060 587 aaPredicted RBP10.93□□□□□ -0.66
RACGAP1P-201ENST00000550663 SNAPC4Q5SXM2 1469 aa10.93□□□□□ -0.66
RACGAP1P-201ENST00000550663 CUL7Q14999 1698 aa10.93□□□□□ -0.66
RACGAP1P-201ENST00000550663 ADAMTS12P58397 1594 aa10.92□□□□□ -0.66
RACGAP1P-201ENST00000550663 FHAD1B1AJZ9 1412 aa10.9□□□□□ -0.67
RACGAP1P-201ENST00000550663 CLIP1P30622 1438 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms