RNA–Protein interactions for RNA: ENST00000550608.1

RDH5-207, Transcript of retinol dehydrogenase 5, humanhuman

TSL 2

Gene RDH5, Length 1,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH5-207ENST00000550608 NISCHQ9Y2I1 1504 aa33.95■■■■□ 3.02
RDH5-207ENST00000550608 CCDC180Q9P1Z9 1646 aa30.09■■■□□ 2.41
RDH5-207ENST00000550608 ABCC9O60706 1549 aa29.34■■■□□ 2.29
RDH5-207ENST00000550608 ZCCHC6Q5VYS8 1495 aaKnown RBP28.37■■■□□ 2.13
RDH5-207ENST00000550608 DCAF8L2P0C7V8 631 aa28.32■■■□□ 2.12
RDH5-207ENST00000550608 RB1CC1Q8TDY2 1594 aa28.23■■■□□ 2.11
RDH5-207ENST00000550608 NACADO15069 1562 aa28.2■■■□□ 2.11
RDH5-207ENST00000550608 DCAF1Q9Y4B6 1507 aa28.06■■■□□ 2.08
RDH5-207ENST00000550608 MYO15BQ96JP2 1530 aa28.03■■■□□ 2.08
RDH5-207ENST00000550608 UNC13AQ9UPW8 1703 aa27.78■■■□□ 2.04
RDH5-207ENST00000550608 SCRIBQ14160 1630 aa27.48■■□□□ 1.99
RDH5-207ENST00000550608 BICRAQ9NZM4 1560 aa27.46■■□□□ 1.99
RDH5-207ENST00000550608 PABPN1Q86U42 306 aaKnown RBP eCLIP27.41■■□□□ 1.98
RDH5-207ENST00000550608 SHROOM4Q9ULL8 1493 aa27.3■■□□□ 1.96
RDH5-207ENST00000550608 DNAJC5BQ9UF47 199 aa26.87■■□□□ 1.89
RDH5-207ENST00000550608 EIF4G1Q04637 1599 aaKnown RBP26.68■■□□□ 1.86
RDH5-207ENST00000550608 CC2D2AQ9P2K1 1620 aa26.57■■□□□ 1.84
RDH5-207ENST00000550608 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
RDH5-207ENST00000550608 SMARCA4P51532 1647 aa26.28■■□□□ 1.8
RDH5-207ENST00000550608 BAZ1AQ9NRL2 1556 aaPredicted RBP26.26■■□□□ 1.79
RDH5-207ENST00000550608 MROH2BQ7Z745 1585 aa26.19■■□□□ 1.78
RDH5-207ENST00000550608 RSF1Q96T23 1441 aaPredicted RBP26.12■■□□□ 1.77
RDH5-207ENST00000550608 ATAD2BQ9ULI0 1458 aa26.06■■□□□ 1.76
RDH5-207ENST00000550608 SUPT5HO00267 1087 aaKnown RBP26.03■■□□□ 1.76
RDH5-207ENST00000550608 SMARCA2P51531 1590 aa26.02■■□□□ 1.76
RDH5-207ENST00000550608 NCAPD3P42695 1498 aa26.01■■□□□ 1.75
RDH5-207ENST00000550608 PEG3Q9GZU2 1588 aa25.99■■□□□ 1.75
RDH5-207ENST00000550608 WIZO95785 1651 aa25.93■■□□□ 1.74
RDH5-207ENST00000550608 HMGXB3Q12766 1538 aa25.92■■□□□ 1.74
RDH5-207ENST00000550608 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
RDH5-207ENST00000550608 TOP2AP11388 1531 aaKnown RBP25.66■■□□□ 1.7
RDH5-207ENST00000550608 NESP48681 1621 aa25.45■■□□□ 1.66
RDH5-207ENST00000550608 CCDC88BA6NC98 1476 aa25.41■■□□□ 1.66
RDH5-207ENST00000550608 LAMC3Q9Y6N6 1575 aa25.34■■□□□ 1.65
RDH5-207ENST00000550608 CADPSQ9ULU8 1353 aa25.25■■□□□ 1.63
RDH5-207ENST00000550608 ERCC6Q03468 1493 aa25.22■■□□□ 1.63
RDH5-207ENST00000550608 KIF21AQ7Z4S6 1674 aa25.21■■□□□ 1.63
RDH5-207ENST00000550608 CFTRP13569 1480 aa25.14■■□□□ 1.61
RDH5-207ENST00000550608 PRDM2Q13029 1718 aa25.1■■□□□ 1.61
RDH5-207ENST00000550608 PDS5BQ9NTI5 1447 aa25.1■■□□□ 1.61
RDH5-207ENST00000550608 THOC2Q8NI27 1593 aaKnown RBP25.06■■□□□ 1.6
RDH5-207ENST00000550608 FANCD2Q9BXW9 1451 aa24.99■■□□□ 1.59
RDH5-207ENST00000550608 CEP164Q9UPV0 1460 aa24.94■■□□□ 1.58
RDH5-207ENST00000550608 CUX2O14529 1486 aa24.92■■□□□ 1.58
RDH5-207ENST00000550608 MRC2Q9UBG0 1479 aa24.89■■□□□ 1.57
RDH5-207ENST00000550608 WDR62O43379 1518 aa24.84■■□□□ 1.57
RDH5-207ENST00000550608 URB2Q14146 1524 aaKnown RBP24.78■■□□□ 1.56
RDH5-207ENST00000550608 ABCC8Q09428 1581 aa24.65■■□□□ 1.54
RDH5-207ENST00000550608 TOPBP1Q92547 1522 aa24.63■■□□□ 1.53
RDH5-207ENST00000550608 WRNQ14191 1432 aaPredicted RBP eCLIP24.62■■□□□ 1.53
RDH5-207ENST00000550608 CHIC1Q5VXU3 224 aa24.61■■□□□ 1.53
RDH5-207ENST00000550608 DNMBPQ6XZF7 1577 aa24.6■■□□□ 1.53
RDH5-207ENST00000550608 CUX1P39880 1505 aa24.53■■□□□ 1.52
RDH5-207ENST00000550608 TRIM41Q8WV44 630 aa24.52■■□□□ 1.52
RDH5-207ENST00000550608 SYNJ1O43426 1573 aa24.48■■□□□ 1.51
RDH5-207ENST00000550608 TOP2BQ02880 1626 aa24.44■■□□□ 1.5
RDH5-207ENST00000550608 POLA1P09884 1462 aaPredicted RBP24.42■■□□□ 1.5
RDH5-207ENST00000550608 BIVM-ERCC5R4GMW8 1640 aa24.41■■□□□ 1.5
RDH5-207ENST00000550608 IFT140Q96RY7 1462 aa24.39■■□□□ 1.5
RDH5-207ENST00000550608 TARBP1Q13395 1621 aaKnown RBP24.39■■□□□ 1.49
RDH5-207ENST00000550608 FGD5Q6ZNL6 1462 aa24.38■■□□□ 1.49
RDH5-207ENST00000550608 ZNF608Q9ULD9 1512 aaPredicted RBP24.35■■□□□ 1.49
RDH5-207ENST00000550608 RAD54L2Q9Y4B4 1467 aa24.33■■□□□ 1.49
RDH5-207ENST00000550608 SOGA1O94964 1423 aa24.29■■□□□ 1.48
RDH5-207ENST00000550608 EIF4G3O43432 1585 aaKnown RBP24.28■■□□□ 1.48
RDH5-207ENST00000550608 WDR97A6NE52 1622 aa24.26■■□□□ 1.47
RDH5-207ENST00000550608 AQRO60306 1485 aaKnown RBP eCLIP24.2■■□□□ 1.46
RDH5-207ENST00000550608 TDRD9Q8NDG6 1382 aaKnown RBP24.15■■□□□ 1.46
RDH5-207ENST00000550608 ABCA10Q8WWZ4 1543 aa24.13■■□□□ 1.45
RDH5-207ENST00000550608 ABCA5Q8WWZ7 1642 aa24.08■■□□□ 1.45
RDH5-207ENST00000550608 PBRM1Q86U86 1689 aa24.08■■□□□ 1.44
RDH5-207ENST00000550608 KIF27Q86VH2 1401 aa24.06■■□□□ 1.44
RDH5-207ENST00000550608 FAM9AQ8IZU1 332 aaPredicted RBP24.05■■□□□ 1.44
RDH5-207ENST00000550608 RUSC2Q8N2Y8 1516 aa24.04■■□□□ 1.44
RDH5-207ENST00000550608 DNAJC5Q9H3Z4 198 aa24.04■■□□□ 1.44
RDH5-207ENST00000550608 CHD1O14646 1710 aa24.02■■□□□ 1.44
RDH5-207ENST00000550608 GAPVD1Q14C86 1478 aa24.01■■□□□ 1.43
RDH5-207ENST00000550608 SNAPC4Q5SXM2 1469 aa23.98■■□□□ 1.43
RDH5-207ENST00000550608 GRIN2BQ13224 1484 aa23.98■■□□□ 1.43
RDH5-207ENST00000550608 EEA1Q15075 1411 aa23.97■■□□□ 1.43
RDH5-207ENST00000550608 CSRNP3Q8WYN3 585 aa23.93■■□□□ 1.42
RDH5-207ENST00000550608 IGF1RP08069 1367 aa23.91■■□□□ 1.42
RDH5-207ENST00000550608 MAGI1Q96QZ7 1491 aaPredicted RBP23.91■■□□□ 1.42
RDH5-207ENST00000550608 OSCARQ8IYS5 282 aa23.86■■□□□ 1.41
RDH5-207ENST00000550608 ERICH3Q5RHP9 1530 aa23.84■■□□□ 1.41
RDH5-207ENST00000550608 ADAMTS12P58397 1594 aa23.83■■□□□ 1.41
RDH5-207ENST00000550608 FBLN2P98095 1184 aa23.83■■□□□ 1.4
RDH5-207ENST00000550608 SYNJ2O15056 1496 aa23.82■■□□□ 1.4
RDH5-207ENST00000550608 CARMIL1Q5VZK9 1371 aa23.79■■□□□ 1.4
RDH5-207ENST00000550608 CHMP7Q8WUX9 453 aaPredicted RBP23.76■■□□□ 1.39
RDH5-207ENST00000550608 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
RDH5-207ENST00000550608 EHMT2Q96KQ7 1210 aa23.73■■□□□ 1.39
RDH5-207ENST00000550608 PRXQ9BXM0 1461 aa23.72■■□□□ 1.39
RDH5-207ENST00000550608 CUL7Q14999 1698 aa23.71■■□□□ 1.39
RDH5-207ENST00000550608 GRIN2AQ12879 1464 aa23.7■■□□□ 1.38
RDH5-207ENST00000550608 CLASP1Q7Z460 1538 aa23.68■■□□□ 1.38
RDH5-207ENST00000550608 RAPGEF2Q9Y4G8 1499 aa23.68■■□□□ 1.38
RDH5-207ENST00000550608 LOC105371045A0A1W2PR82 267 aa23.65■■□□□ 1.38
RDH5-207ENST00000550608 CEP170Q5SW79 1584 aa23.63■■□□□ 1.37
RDH5-207ENST00000550608 KIF21BO75037 1637 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms