RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 NISCHQ9Y2I1 1504 aa28.53■■■□□ 2.16
CACNB3-217ENST00000550483 CCDC180Q9P1Z9 1646 aa25.01■■□□□ 1.59
CACNB3-217ENST00000550483 ABCC9O60706 1549 aa24.83■■□□□ 1.57
CACNB3-217ENST00000550483 DNAJC5BQ9UF47 199 aa24■■□□□ 1.43
CACNB3-217ENST00000550483 ZCCHC6Q5VYS8 1495 aaKnown RBP24■■□□□ 1.43
CACNB3-217ENST00000550483 DCAF1Q9Y4B6 1507 aa23.76■■□□□ 1.39
CACNB3-217ENST00000550483 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
CACNB3-217ENST00000550483 DCAF8L2P0C7V8 631 aa23.35■■□□□ 1.33
CACNB3-217ENST00000550483 NACADO15069 1562 aa23.31■■□□□ 1.32
CACNB3-217ENST00000550483 RB1CC1Q8TDY2 1594 aa23.19■■□□□ 1.3
CACNB3-217ENST00000550483 PABPN1Q86U42 306 aaKnown RBP eCLIP23.18■■□□□ 1.3
CACNB3-217ENST00000550483 SHROOM4Q9ULL8 1493 aa22.98■■□□□ 1.27
CACNB3-217ENST00000550483 SCRIBQ14160 1630 aa22.78■■□□□ 1.24
CACNB3-217ENST00000550483 UNC13AQ9UPW8 1703 aa22.68■■□□□ 1.22
CACNB3-217ENST00000550483 BICRAQ9NZM4 1560 aa22.63■■□□□ 1.21
CACNB3-217ENST00000550483 CECR2Q9BXF3 1484 aa22.38■■□□□ 1.17
CACNB3-217ENST00000550483 DNAJC5Q9H3Z4 198 aa22.34■■□□□ 1.17
CACNB3-217ENST00000550483 CC2D2AQ9P2K1 1620 aa22.31■■□□□ 1.16
CACNB3-217ENST00000550483 SUPT5HO00267 1087 aaKnown RBP22.14■■□□□ 1.13
CACNB3-217ENST00000550483 BAZ1AQ9NRL2 1556 aaPredicted RBP22.11■■□□□ 1.13
CACNB3-217ENST00000550483 EIF4G1Q04637 1599 aaKnown RBP22.09■■□□□ 1.13
CACNB3-217ENST00000550483 RSF1Q96T23 1441 aaPredicted RBP22.07■■□□□ 1.12
CACNB3-217ENST00000550483 MROH2BQ7Z745 1585 aa21.95■■□□□ 1.1
CACNB3-217ENST00000550483 SMARCA4P51532 1647 aa21.93■■□□□ 1.1
CACNB3-217ENST00000550483 PEG3Q9GZU2 1588 aa21.76■■□□□ 1.07
CACNB3-217ENST00000550483 WIZO95785 1651 aa21.73■■□□□ 1.07
CACNB3-217ENST00000550483 SMARCA2P51531 1590 aa21.67■■□□□ 1.06
CACNB3-217ENST00000550483 TOP2AP11388 1531 aaKnown RBP21.67■■□□□ 1.06
CACNB3-217ENST00000550483 ATAD2BQ9ULI0 1458 aa21.58■■□□□ 1.05
CACNB3-217ENST00000550483 CUX2O14529 1486 aa21.48■■□□□ 1.03
CACNB3-217ENST00000550483 BAZ1BQ9UIG0 1483 aaKnown RBP21.48■■□□□ 1.03
CACNB3-217ENST00000550483 HMGXB3Q12766 1538 aa21.48■■□□□ 1.03
CACNB3-217ENST00000550483 NCAPD3P42695 1498 aa21.47■■□□□ 1.03
CACNB3-217ENST00000550483 ERCC6Q03468 1493 aa21.41■■□□□ 1.02
CACNB3-217ENST00000550483 CCDC88BA6NC98 1476 aa21.35■■□□□ 1.01
CACNB3-217ENST00000550483 CHIC1Q5VXU3 224 aa21.26■□□□□ 0.99
CACNB3-217ENST00000550483 TRIM41Q8WV44 630 aa21.21■□□□□ 0.99
CACNB3-217ENST00000550483 NESP48681 1621 aa21.19■□□□□ 0.98
CACNB3-217ENST00000550483 CFTRP13569 1480 aa20.95■□□□□ 0.94
CACNB3-217ENST00000550483 THOC2Q8NI27 1593 aaKnown RBP20.91■□□□□ 0.94
CACNB3-217ENST00000550483 CADPSQ9ULU8 1353 aa20.88■□□□□ 0.93
CACNB3-217ENST00000550483 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
CACNB3-217ENST00000550483 WRNQ14191 1432 aaPredicted RBP eCLIP20.83■□□□□ 0.93
CACNB3-217ENST00000550483 ABCC8Q09428 1581 aa20.8■□□□□ 0.92
CACNB3-217ENST00000550483 LAMC3Q9Y6N6 1575 aa20.76■□□□□ 0.91
CACNB3-217ENST00000550483 KIF21AQ7Z4S6 1674 aa20.76■□□□□ 0.91
CACNB3-217ENST00000550483 PDS5BQ9NTI5 1447 aa20.73■□□□□ 0.91
CACNB3-217ENST00000550483 TOP2BQ02880 1626 aa20.67■□□□□ 0.9
CACNB3-217ENST00000550483 EEA1Q15075 1411 aa20.67■□□□□ 0.9
CACNB3-217ENST00000550483 BIVM-ERCC5R4GMW8 1640 aa20.66■□□□□ 0.9
CACNB3-217ENST00000550483 SYNJ1O43426 1573 aa20.65■□□□□ 0.9
CACNB3-217ENST00000550483 FANCD2Q9BXW9 1451 aa20.62■□□□□ 0.89
CACNB3-217ENST00000550483 OSCARQ8IYS5 282 aa20.59■□□□□ 0.89
CACNB3-217ENST00000550483 MRC2Q9UBG0 1479 aa20.58■□□□□ 0.89
CACNB3-217ENST00000550483 CUX1P39880 1505 aa20.54■□□□□ 0.88
CACNB3-217ENST00000550483 CEP164Q9UPV0 1460 aa20.53■□□□□ 0.88
CACNB3-217ENST00000550483 WDR62O43379 1518 aa20.5■□□□□ 0.87
CACNB3-217ENST00000550483 DNMBPQ6XZF7 1577 aa20.47■□□□□ 0.87
CACNB3-217ENST00000550483 SOGA1O94964 1423 aa20.42■□□□□ 0.86
CACNB3-217ENST00000550483 TOPBP1Q92547 1522 aa20.38■□□□□ 0.85
CACNB3-217ENST00000550483 FAM9AQ8IZU1 332 aaPredicted RBP20.38■□□□□ 0.85
CACNB3-217ENST00000550483 CSRNP3Q8WYN3 585 aa20.37■□□□□ 0.85
CACNB3-217ENST00000550483 FGD5Q6ZNL6 1462 aa20.36■□□□□ 0.85
CACNB3-217ENST00000550483 KIF27Q86VH2 1401 aa20.36■□□□□ 0.85
CACNB3-217ENST00000550483 URB2Q14146 1524 aaKnown RBP20.31■□□□□ 0.84
CACNB3-217ENST00000550483 KIF21BO75037 1637 aa20.29■□□□□ 0.84
CACNB3-217ENST00000550483 LOC105371045A0A1W2PR82 267 aa20.29■□□□□ 0.84
CACNB3-217ENST00000550483 RUSC2Q8N2Y8 1516 aa20.28■□□□□ 0.84
CACNB3-217ENST00000550483 POLA1P09884 1462 aaPredicted RBP20.27■□□□□ 0.84
CACNB3-217ENST00000550483 RIMBP3CA6NJZ7 1639 aa20.27■□□□□ 0.83
CACNB3-217ENST00000550483 RIMBP3BA6NNM3 1639 aa20.27■□□□□ 0.83
CACNB3-217ENST00000550483 RIMBP3Q9UFD9 1639 aa20.27■□□□□ 0.83
CACNB3-217ENST00000550483 GOLGA3Q08378 1498 aa20.26■□□□□ 0.83
CACNB3-217ENST00000550483 ABCA10Q8WWZ4 1543 aa20.26■□□□□ 0.83
CACNB3-217ENST00000550483 CYB5RLQ6IPT4 315 aa20.22■□□□□ 0.83
CACNB3-217ENST00000550483 ERICH3Q5RHP9 1530 aa20.21■□□□□ 0.83
CACNB3-217ENST00000550483 TNIKQ9UKE5 1360 aa20.19■□□□□ 0.82
CACNB3-217ENST00000550483 TRHP20396 242 aaPredicted RBP20.17■□□□□ 0.82
CACNB3-217ENST00000550483 PRXQ9BXM0 1461 aa20.17■□□□□ 0.82
CACNB3-217ENST00000550483 ARHGEF11O15085 1522 aa20.15■□□□□ 0.82
CACNB3-217ENST00000550483 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
CACNB3-217ENST00000550483 ZNF608Q9ULD9 1512 aaPredicted RBP20.13■□□□□ 0.81
CACNB3-217ENST00000550483 RAD54L2Q9Y4B4 1467 aa20.11■□□□□ 0.81
CACNB3-217ENST00000550483 IFT140Q96RY7 1462 aa20.09■□□□□ 0.81
CACNB3-217ENST00000550483 IGF1RP08069 1367 aa20.08■□□□□ 0.81
CACNB3-217ENST00000550483 TARBP1Q13395 1621 aaKnown RBP20.07■□□□□ 0.8
CACNB3-217ENST00000550483 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
CACNB3-217ENST00000550483 UBTFP17480 764 aaKnown RBP20.05■□□□□ 0.8
CACNB3-217ENST00000550483 CUL7Q14999 1698 aa20.05■□□□□ 0.8
CACNB3-217ENST00000550483 RAPGEF2Q9Y4G8 1499 aa20.05■□□□□ 0.8
CACNB3-217ENST00000550483 GAPVD1Q14C86 1478 aa20.01■□□□□ 0.79
CACNB3-217ENST00000550483 CARMIL1Q5VZK9 1371 aa20.01■□□□□ 0.79
CACNB3-217ENST00000550483 CEP162Q5TB80 1403 aa20.01■□□□□ 0.79
CACNB3-217ENST00000550483 AEBP2Q6ZN18 517 aaPredicted RBP19.98■□□□□ 0.79
CACNB3-217ENST00000550483 FBLN2P98095 1184 aa19.96■□□□□ 0.79
CACNB3-217ENST00000550483 EHMT2Q96KQ7 1210 aa19.96■□□□□ 0.79
CACNB3-217ENST00000550483 ARAP1Q96P48 1450 aa19.94■□□□□ 0.78
CACNB3-217ENST00000550483 TDRD9Q8NDG6 1382 aaKnown RBP19.93■□□□□ 0.78
CACNB3-217ENST00000550483 AQRO60306 1485 aaKnown RBP eCLIP19.91■□□□□ 0.78
CACNB3-217ENST00000550483 GRIN2BQ13224 1484 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms