RNA–Protein interactions for RNA: ENST00000549971.5

CACNB3-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-212ENST00000549971 NISCHQ9Y2I1 1504 aa28.53■■■□□ 2.16
CACNB3-212ENST00000549971 CCDC180Q9P1Z9 1646 aa25.01■■□□□ 1.59
CACNB3-212ENST00000549971 ZCCHC6Q5VYS8 1495 aaKnown RBP24■■□□□ 1.43
CACNB3-212ENST00000549971 DCAF1Q9Y4B6 1507 aa23.76■■□□□ 1.39
CACNB3-212ENST00000549971 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
CACNB3-212ENST00000549971 ABCC9O60706 1549 aa23.43■■□□□ 1.34
CACNB3-212ENST00000549971 DCAF8L2P0C7V8 631 aa23.35■■□□□ 1.33
CACNB3-212ENST00000549971 NACADO15069 1562 aa23.31■■□□□ 1.32
CACNB3-212ENST00000549971 RB1CC1Q8TDY2 1594 aa23.08■■□□□ 1.29
CACNB3-212ENST00000549971 SHROOM4Q9ULL8 1493 aa22.98■■□□□ 1.27
CACNB3-212ENST00000549971 SCRIBQ14160 1630 aa22.78■■□□□ 1.24
CACNB3-212ENST00000549971 UNC13AQ9UPW8 1703 aa22.4■■□□□ 1.18
CACNB3-212ENST00000549971 BICRAQ9NZM4 1560 aa22.24■■□□□ 1.15
CACNB3-212ENST00000549971 SUPT5HO00267 1087 aaKnown RBP22.14■■□□□ 1.13
CACNB3-212ENST00000549971 BAZ1AQ9NRL2 1556 aaPredicted RBP22.11■■□□□ 1.13
CACNB3-212ENST00000549971 RSF1Q96T23 1441 aaPredicted RBP22.07■■□□□ 1.12
CACNB3-212ENST00000549971 CECR2Q9BXF3 1484 aa22.03■■□□□ 1.12
CACNB3-212ENST00000549971 PABPN1Q86U42 306 aaKnown RBP eCLIP22.01■■□□□ 1.11
CACNB3-212ENST00000549971 MROH2BQ7Z745 1585 aa21.95■■□□□ 1.1
CACNB3-212ENST00000549971 SMARCA4P51532 1647 aa21.93■■□□□ 1.1
CACNB3-212ENST00000549971 PEG3Q9GZU2 1588 aa21.76■■□□□ 1.07
CACNB3-212ENST00000549971 WIZO95785 1651 aa21.73■■□□□ 1.07
CACNB3-212ENST00000549971 SMARCA2P51531 1590 aa21.67■■□□□ 1.06
CACNB3-212ENST00000549971 TOP2AP11388 1531 aaKnown RBP21.67■■□□□ 1.06
CACNB3-212ENST00000549971 EIF4G1Q04637 1599 aaKnown RBP21.62■■□□□ 1.05
CACNB3-212ENST00000549971 ATAD2BQ9ULI0 1458 aa21.58■■□□□ 1.05
CACNB3-212ENST00000549971 DNAJC5BQ9UF47 199 aa21.52■■□□□ 1.04
CACNB3-212ENST00000549971 BAZ1BQ9UIG0 1483 aaKnown RBP21.48■■□□□ 1.03
CACNB3-212ENST00000549971 HMGXB3Q12766 1538 aa21.48■■□□□ 1.03
CACNB3-212ENST00000549971 NCAPD3P42695 1498 aa21.47■■□□□ 1.03
CACNB3-212ENST00000549971 CCDC88BA6NC98 1476 aa21.35■■□□□ 1.01
CACNB3-212ENST00000549971 CC2D2AQ9P2K1 1620 aa21.27■■□□□ 1
CACNB3-212ENST00000549971 CHIC1Q5VXU3 224 aa21.26■□□□□ 0.99
CACNB3-212ENST00000549971 TRIM41Q8WV44 630 aa20.96■□□□□ 0.95
CACNB3-212ENST00000549971 CFTRP13569 1480 aa20.95■□□□□ 0.94
CACNB3-212ENST00000549971 CADPSQ9ULU8 1353 aa20.88■□□□□ 0.93
CACNB3-212ENST00000549971 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
CACNB3-212ENST00000549971 WRNQ14191 1432 aaPredicted RBP eCLIP20.83■□□□□ 0.93
CACNB3-212ENST00000549971 ABCC8Q09428 1581 aa20.8■□□□□ 0.92
CACNB3-212ENST00000549971 LAMC3Q9Y6N6 1575 aa20.76■□□□□ 0.91
CACNB3-212ENST00000549971 TOP2BQ02880 1626 aa20.67■□□□□ 0.9
CACNB3-212ENST00000549971 EEA1Q15075 1411 aa20.67■□□□□ 0.9
CACNB3-212ENST00000549971 BIVM-ERCC5R4GMW8 1640 aa20.66■□□□□ 0.9
CACNB3-212ENST00000549971 SYNJ1O43426 1573 aa20.65■□□□□ 0.9
CACNB3-212ENST00000549971 FANCD2Q9BXW9 1451 aa20.62■□□□□ 0.89
CACNB3-212ENST00000549971 PDS5BQ9NTI5 1447 aa20.61■□□□□ 0.89
CACNB3-212ENST00000549971 CUX1P39880 1505 aa20.54■□□□□ 0.88
CACNB3-212ENST00000549971 CEP164Q9UPV0 1460 aa20.53■□□□□ 0.88
CACNB3-212ENST00000549971 NESP48681 1621 aa20.53■□□□□ 0.88
CACNB3-212ENST00000549971 DNMBPQ6XZF7 1577 aa20.47■□□□□ 0.87
CACNB3-212ENST00000549971 SOGA1O94964 1423 aa20.42■□□□□ 0.86
CACNB3-212ENST00000549971 TOPBP1Q92547 1522 aa20.38■□□□□ 0.85
CACNB3-212ENST00000549971 FAM9AQ8IZU1 332 aaPredicted RBP20.38■□□□□ 0.85
CACNB3-212ENST00000549971 CSRNP3Q8WYN3 585 aa20.37■□□□□ 0.85
CACNB3-212ENST00000549971 FGD5Q6ZNL6 1462 aa20.36■□□□□ 0.85
CACNB3-212ENST00000549971 KIF27Q86VH2 1401 aa20.36■□□□□ 0.85
CACNB3-212ENST00000549971 KIF21AQ7Z4S6 1674 aa20.32■□□□□ 0.84
CACNB3-212ENST00000549971 URB2Q14146 1524 aaKnown RBP20.31■□□□□ 0.84
CACNB3-212ENST00000549971 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
CACNB3-212ENST00000549971 KIF21BO75037 1637 aa20.29■□□□□ 0.84
CACNB3-212ENST00000549971 LOC105371045A0A1W2PR82 267 aa20.29■□□□□ 0.84
CACNB3-212ENST00000549971 RUSC2Q8N2Y8 1516 aa20.28■□□□□ 0.84
CACNB3-212ENST00000549971 POLA1P09884 1462 aaPredicted RBP20.27■□□□□ 0.84
CACNB3-212ENST00000549971 GOLGA3Q08378 1498 aa20.26■□□□□ 0.83
CACNB3-212ENST00000549971 ABCA10Q8WWZ4 1543 aa20.26■□□□□ 0.83
CACNB3-212ENST00000549971 CUX2O14529 1486 aa20.22■□□□□ 0.83
CACNB3-212ENST00000549971 ERCC6Q03468 1493 aa20.21■□□□□ 0.83
CACNB3-212ENST00000549971 WDR62O43379 1518 aa20.21■□□□□ 0.83
CACNB3-212ENST00000549971 ERICH3Q5RHP9 1530 aa20.21■□□□□ 0.83
CACNB3-212ENST00000549971 TNIKQ9UKE5 1360 aa20.19■□□□□ 0.82
CACNB3-212ENST00000549971 PRXQ9BXM0 1461 aa20.17■□□□□ 0.82
CACNB3-212ENST00000549971 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
CACNB3-212ENST00000549971 RAD54L2Q9Y4B4 1467 aa20.11■□□□□ 0.81
CACNB3-212ENST00000549971 IFT140Q96RY7 1462 aa20.09■□□□□ 0.81
CACNB3-212ENST00000549971 IGF1RP08069 1367 aa20.08■□□□□ 0.81
CACNB3-212ENST00000549971 THOC2Q8NI27 1593 aaKnown RBP20.08■□□□□ 0.81
CACNB3-212ENST00000549971 TARBP1Q13395 1621 aaKnown RBP20.07■□□□□ 0.8
CACNB3-212ENST00000549971 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
CACNB3-212ENST00000549971 UBTFP17480 764 aaKnown RBP20.05■□□□□ 0.8
CACNB3-212ENST00000549971 CUL7Q14999 1698 aa20.05■□□□□ 0.8
CACNB3-212ENST00000549971 RAPGEF2Q9Y4G8 1499 aa20.05■□□□□ 0.8
CACNB3-212ENST00000549971 GAPVD1Q14C86 1478 aa20.01■□□□□ 0.79
CACNB3-212ENST00000549971 CARMIL1Q5VZK9 1371 aa20.01■□□□□ 0.79
CACNB3-212ENST00000549971 CEP162Q5TB80 1403 aa20.01■□□□□ 0.79
CACNB3-212ENST00000549971 DNAJC5Q9H3Z4 198 aa19.99■□□□□ 0.79
CACNB3-212ENST00000549971 EHMT2Q96KQ7 1210 aa19.96■□□□□ 0.79
CACNB3-212ENST00000549971 TDRD9Q8NDG6 1382 aaKnown RBP19.93■□□□□ 0.78
CACNB3-212ENST00000549971 GRIN2BQ13224 1484 aa19.91■□□□□ 0.78
CACNB3-212ENST00000549971 CLIP1P30622 1438 aa19.88■□□□□ 0.77
CACNB3-212ENST00000549971 PBRM1Q86U86 1689 aa19.87■□□□□ 0.77
CACNB3-212ENST00000549971 FHAD1B1AJZ9 1412 aa19.85■□□□□ 0.77
CACNB3-212ENST00000549971 EIF4G3O43432 1585 aaKnown RBP19.81■□□□□ 0.76
CACNB3-212ENST00000549971 AQRO60306 1485 aaKnown RBP eCLIP19.8■□□□□ 0.76
CACNB3-212ENST00000549971 ADAMTS12P58397 1594 aa19.8■□□□□ 0.76
CACNB3-212ENST00000549971 ZNF608Q9ULD9 1512 aaPredicted RBP19.78■□□□□ 0.76
CACNB3-212ENST00000549971 MAGI1Q96QZ7 1491 aaPredicted RBP19.78■□□□□ 0.76
CACNB3-212ENST00000549971 VPS8Q8N3P4 1428 aa19.75■□□□□ 0.75
CACNB3-212ENST00000549971 CTTNBP2Q8WZ74 1663 aa19.74■□□□□ 0.75
CACNB3-212ENST00000549971 EFCAB5A4FU69 1503 aa19.72■□□□□ 0.75
CACNB3-212ENST00000549971 SNAPC4Q5SXM2 1469 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms