RNA–Protein interactions for RNA: ENST00000549524.1

TCHP-207, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 3,428 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-207ENST00000549524 NISCHQ9Y2I1 1504 aa18.53■□□□□ 0.56
TCHP-207ENST00000549524 CCDC180Q9P1Z9 1646 aa16.37■□□□□ 0.21
TCHP-207ENST00000549524 ZCCHC6Q5VYS8 1495 aaKnown RBP15.72■□□□□ 0.11
TCHP-207ENST00000549524 DCAF1Q9Y4B6 1507 aa15.62■□□□□ 0.09
TCHP-207ENST00000549524 MYO15BQ96JP2 1530 aa15.37■□□□□ 0.05
TCHP-207ENST00000549524 NACADO15069 1562 aa14.95□□□□□ -0.02
TCHP-207ENST00000549524 ABCC9O60706 1549 aa14.82□□□□□ -0.04
TCHP-207ENST00000549524 UNC13AQ9UPW8 1703 aa14.69□□□□□ -0.06
TCHP-207ENST00000549524 DCAF8L2P0C7V8 631 aa14.67□□□□□ -0.06
TCHP-207ENST00000549524 RB1CC1Q8TDY2 1594 aa14.67□□□□□ -0.06
TCHP-207ENST00000549524 SCRIBQ14160 1630 aa14.61□□□□□ -0.07
TCHP-207ENST00000549524 SHROOM4Q9ULL8 1493 aa14.61□□□□□ -0.07
TCHP-207ENST00000549524 SUPT5HO00267 1087 aaKnown RBP14.56□□□□□ -0.08
TCHP-207ENST00000549524 HRCP23327 699 aa14.41□□□□□ -0.1
TCHP-207ENST00000549524 BICRAQ9NZM4 1560 aa14.36□□□□□ -0.11
TCHP-207ENST00000549524 RSF1Q96T23 1441 aaPredicted RBP14.35□□□□□ -0.11
TCHP-207ENST00000549524 BAZ1AQ9NRL2 1556 aaPredicted RBP14.32□□□□□ -0.12
TCHP-207ENST00000549524 EIF4G1Q04637 1599 aaKnown RBP14.29□□□□□ -0.12
TCHP-207ENST00000549524 PEG3Q9GZU2 1588 aa14.29□□□□□ -0.12
TCHP-207ENST00000549524 SMARCA4P51532 1647 aa14.25□□□□□ -0.13
TCHP-207ENST00000549524 PCGF6Q9BYE7 350 aa14.24□□□□□ -0.13
TCHP-207ENST00000549524 MROH2BQ7Z745 1585 aa14.23□□□□□ -0.13
TCHP-207ENST00000549524 CHIC1Q5VXU3 224 aa14.21□□□□□ -0.14
TCHP-207ENST00000549524 WIZO95785 1651 aa14.19□□□□□ -0.14
TCHP-207ENST00000549524 CECR2Q9BXF3 1484 aa14.18□□□□□ -0.14
TCHP-207ENST00000549524 TOP2AP11388 1531 aaKnown RBP14.14□□□□□ -0.15
TCHP-207ENST00000549524 PPARGC1BQ86YN6 1023 aaKnown RBP14.07□□□□□ -0.16
TCHP-207ENST00000549524 SMARCA2P51531 1590 aa14.01□□□□□ -0.17
TCHP-207ENST00000549524 AEBP2Q6ZN18 517 aaPredicted RBP13.92□□□□□ -0.18
TCHP-207ENST00000549524 LOC105371045A0A1W2PR82 267 aa13.86□□□□□ -0.19
TCHP-207ENST00000549524 HMGXB3Q12766 1538 aa13.86□□□□□ -0.19
TCHP-207ENST00000549524 PRDM2Q13029 1718 aa13.85□□□□□ -0.19
TCHP-207ENST00000549524 TRIM26Q12899 539 aaPredicted RBP13.85□□□□□ -0.19
TCHP-207ENST00000549524 CCDC88BA6NC98 1476 aa13.81□□□□□ -0.2
TCHP-207ENST00000549524 ATAD2BQ9ULI0 1458 aa13.8□□□□□ -0.2
TCHP-207ENST00000549524 PELP1Q8IZL8 1130 aaKnown RBP13.78□□□□□ -0.2
TCHP-207ENST00000549524 ZEB1P37275 1124 aaPredicted RBP13.75□□□□□ -0.21
TCHP-207ENST00000549524 NCAPD3P42695 1498 aa13.71□□□□□ -0.22
TCHP-207ENST00000549524 BIVM-ERCC5R4GMW8 1640 aa13.67□□□□□ -0.22
TCHP-207ENST00000549524 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
TCHP-207ENST00000549524 BAZ1BQ9UIG0 1483 aaKnown RBP13.63□□□□□ -0.23
TCHP-207ENST00000549524 TOP2BQ02880 1626 aa13.56□□□□□ -0.24
TCHP-207ENST00000549524 ABCC8Q09428 1581 aa13.55□□□□□ -0.24
TCHP-207ENST00000549524 SYNJ1O43426 1573 aa13.54□□□□□ -0.24
TCHP-207ENST00000549524 TRIM41Q8WV44 630 aa13.51□□□□□ -0.25
TCHP-207ENST00000549524 EEA1Q15075 1411 aa13.51□□□□□ -0.25
TCHP-207ENST00000549524 KIF21BO75037 1637 aa13.5□□□□□ -0.25
TCHP-207ENST00000549524 SCAF1Q9H7N4 1312 aaKnown RBP13.49□□□□□ -0.25
TCHP-207ENST00000549524 FAM9AQ8IZU1 332 aaPredicted RBP13.47□□□□□ -0.25
TCHP-207ENST00000549524 CFTRP13569 1480 aa13.47□□□□□ -0.25
TCHP-207ENST00000549524 CC2D2AQ9P2K1 1620 aa13.44□□□□□ -0.26
TCHP-207ENST00000549524 EHMT2Q96KQ7 1210 aa13.41□□□□□ -0.26
TCHP-207ENST00000549524 WRNQ14191 1432 aaPredicted RBP eCLIP13.4□□□□□ -0.26
TCHP-207ENST00000549524 CUX1P39880 1505 aa13.33□□□□□ -0.27
TCHP-207ENST00000549524 ERICH3Q5RHP9 1530 aa13.33□□□□□ -0.28
TCHP-207ENST00000549524 WDR97A6NE52 1622 aa13.32□□□□□ -0.28
TCHP-207ENST00000549524 CCER1Q8TC90 406 aaPredicted RBP13.29□□□□□ -0.28
TCHP-207ENST00000549524 ACIN1Q9UKV3 1341 aaKnown RBP13.29□□□□□ -0.28
TCHP-207ENST00000549524 LAMC3Q9Y6N6 1575 aa13.27□□□□□ -0.29
TCHP-207ENST00000549524 CENPBP07199 599 aaPredicted RBP13.27□□□□□ -0.29
TCHP-207ENST00000549524 SOGA1O94964 1423 aa13.26□□□□□ -0.29
TCHP-207ENST00000549524 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.25□□□□□ -0.29
TCHP-207ENST00000549524 TNIKQ9UKE5 1360 aa13.24□□□□□ -0.29
TCHP-207ENST00000549524 MYT1Q01538 1121 aa13.24□□□□□ -0.29
TCHP-207ENST00000549524 RUSC2Q8N2Y8 1516 aa13.24□□□□□ -0.29
TCHP-207ENST00000549524 GOLGA3Q08378 1498 aa13.23□□□□□ -0.29
TCHP-207ENST00000549524 CEP164Q9UPV0 1460 aa13.22□□□□□ -0.29
TCHP-207ENST00000549524 NEUROD1Q13562 356 aa13.22□□□□□ -0.29
TCHP-207ENST00000549524 PRXQ9BXM0 1461 aa13.21□□□□□ -0.29
TCHP-207ENST00000549524 DNMBPQ6XZF7 1577 aa13.2□□□□□ -0.3
TCHP-207ENST00000549524 DIEXFQ68CQ4 756 aaKnown RBP13.19□□□□□ -0.3
TCHP-207ENST00000549524 GTF3C3Q9Y5Q9 886 aa13.19□□□□□ -0.3
TCHP-207ENST00000549524 CADPSQ9ULU8 1353 aa13.18□□□□□ -0.3
TCHP-207ENST00000549524 CEP162Q5TB80 1403 aa13.11□□□□□ -0.31
TCHP-207ENST00000549524 ABCA5Q8WWZ7 1642 aa13.1□□□□□ -0.31
TCHP-207ENST00000549524 CUL7Q14999 1698 aa13.1□□□□□ -0.31
TCHP-207ENST00000549524 KIF21AQ7Z4S6 1674 aa13.09□□□□□ -0.31
TCHP-207ENST00000549524 ABCA10Q8WWZ4 1543 aa13.08□□□□□ -0.32
TCHP-207ENST00000549524 CSRNP3Q8WYN3 585 aa13.06□□□□□ -0.32
TCHP-207ENST00000549524 FANCD2Q9BXW9 1451 aa13.05□□□□□ -0.32
TCHP-207ENST00000549524 TTBK1Q5TCY1 1321 aaPredicted RBP13.05□□□□□ -0.32
TCHP-207ENST00000549524 CTTNBP2Q8WZ74 1663 aa13.05□□□□□ -0.32
TCHP-207ENST00000549524 RAPGEF2Q9Y4G8 1499 aa13.05□□□□□ -0.32
TCHP-207ENST00000549524 TOPBP1Q92547 1522 aa13.03□□□□□ -0.32
TCHP-207ENST00000549524 TARBP1Q13395 1621 aaKnown RBP13.03□□□□□ -0.32
TCHP-207ENST00000549524 FGD5Q6ZNL6 1462 aa13.02□□□□□ -0.32
TCHP-207ENST00000549524 KIF27Q86VH2 1401 aa13.01□□□□□ -0.33
TCHP-207ENST00000549524 URB2Q14146 1524 aaKnown RBP12.98□□□□□ -0.33
TCHP-207ENST00000549524 ZNF316A6NFI3 1004 aaPredicted RBP12.98□□□□□ -0.33
TCHP-207ENST00000549524 MAP3K1Q13233 1512 aa12.98□□□□□ -0.33
TCHP-207ENST00000549524 YTHDC1Q96MU7 727 aaKnown RBP12.97□□□□□ -0.33
TCHP-207ENST00000549524 POLA1P09884 1462 aaPredicted RBP12.96□□□□□ -0.33
TCHP-207ENST00000549524 PBRM1Q86U86 1689 aa12.96□□□□□ -0.33
TCHP-207ENST00000549524 ARAP1Q96P48 1450 aa12.96□□□□□ -0.34
TCHP-207ENST00000549524 VPS8Q8N3P4 1428 aa12.95□□□□□ -0.34
TCHP-207ENST00000549524 CFAP43Q8NDM7 1665 aa12.95□□□□□ -0.34
TCHP-207ENST00000549524 NESP48681 1621 aa12.92□□□□□ -0.34
TCHP-207ENST00000549524 WDR62O43379 1518 aa12.92□□□□□ -0.34
TCHP-207ENST00000549524 SAMD9Q5K651 1589 aa12.91□□□□□ -0.34
TCHP-207ENST00000549524 IGF1RP08069 1367 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms