RNA–Protein interactions for RNA: ENST00000549468.5

TGIF1-213, Transcript of TGFB induced factor homeobox 1, humanhuman

TSL 3

Gene TGIF1, Length 526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGIF1-213ENST00000549468 NISCHQ9Y2I1 1504 aa16.89■□□□□ 0.29
TGIF1-213ENST00000549468 CCDC180Q9P1Z9 1646 aa14.81□□□□□ -0.04
TGIF1-213ENST00000549468 ABCC9O60706 1549 aa14.29□□□□□ -0.12
TGIF1-213ENST00000549468 DCAF8L2P0C7V8 631 aa14.1□□□□□ -0.15
TGIF1-213ENST00000549468 ZCCHC6Q5VYS8 1495 aaKnown RBP14.09□□□□□ -0.15
TGIF1-213ENST00000549468 DCAF1Q9Y4B6 1507 aa14.01□□□□□ -0.17
TGIF1-213ENST00000549468 MYO15BQ96JP2 1530 aa14□□□□□ -0.17
TGIF1-213ENST00000549468 NACADO15069 1562 aa13.96□□□□□ -0.17
TGIF1-213ENST00000549468 AEBP2Q6ZN18 517 aaPredicted RBP13.9□□□□□ -0.18
TGIF1-213ENST00000549468 RB1CC1Q8TDY2 1594 aa13.88□□□□□ -0.19
TGIF1-213ENST00000549468 SCRIBQ14160 1630 aa13.51□□□□□ -0.25
TGIF1-213ENST00000549468 SHROOM4Q9ULL8 1493 aa13.48□□□□□ -0.25
TGIF1-213ENST00000549468 PABPN1Q86U42 306 aaKnown RBP eCLIP13.46□□□□□ -0.25
TGIF1-213ENST00000549468 BICRAQ9NZM4 1560 aa13.37□□□□□ -0.27
TGIF1-213ENST00000549468 UNC13AQ9UPW8 1703 aa13.37□□□□□ -0.27
TGIF1-213ENST00000549468 CHIC1Q5VXU3 224 aa13.21□□□□□ -0.29
TGIF1-213ENST00000549468 CECR2Q9BXF3 1484 aa13.1□□□□□ -0.31
TGIF1-213ENST00000549468 BAZ1AQ9NRL2 1556 aaPredicted RBP13.07□□□□□ -0.32
TGIF1-213ENST00000549468 EIF4G1Q04637 1599 aaKnown RBP13.04□□□□□ -0.32
TGIF1-213ENST00000549468 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
TGIF1-213ENST00000549468 RSF1Q96T23 1441 aaPredicted RBP12.98□□□□□ -0.33
TGIF1-213ENST00000549468 MROH2BQ7Z745 1585 aa12.98□□□□□ -0.33
TGIF1-213ENST00000549468 SMARCA2P51531 1590 aa12.92□□□□□ -0.34
TGIF1-213ENST00000549468 NCAPD3P42695 1498 aa12.91□□□□□ -0.34
TGIF1-213ENST00000549468 ATAD2BQ9ULI0 1458 aa12.91□□□□□ -0.34
TGIF1-213ENST00000549468 SUPT5HO00267 1087 aaKnown RBP12.91□□□□□ -0.34
TGIF1-213ENST00000549468 DNAJC5BQ9UF47 199 aa12.91□□□□□ -0.34
TGIF1-213ENST00000549468 CC2D2AQ9P2K1 1620 aa12.9□□□□□ -0.34
TGIF1-213ENST00000549468 PEG3Q9GZU2 1588 aa12.9□□□□□ -0.35
TGIF1-213ENST00000549468 BAZ1BQ9UIG0 1483 aaKnown RBP12.82□□□□□ -0.36
TGIF1-213ENST00000549468 HMGXB3Q12766 1538 aa12.8□□□□□ -0.36
TGIF1-213ENST00000549468 WIZO95785 1651 aa12.8□□□□□ -0.36
TGIF1-213ENST00000549468 TOP2AP11388 1531 aaKnown RBP12.74□□□□□ -0.37
TGIF1-213ENST00000549468 CCDC88BA6NC98 1476 aa12.63□□□□□ -0.39
TGIF1-213ENST00000549468 CADPSQ9ULU8 1353 aa12.56□□□□□ -0.4
TGIF1-213ENST00000549468 CFTRP13569 1480 aa12.52□□□□□ -0.41
TGIF1-213ENST00000549468 LAMC3Q9Y6N6 1575 aa12.47□□□□□ -0.41
TGIF1-213ENST00000549468 PDS5BQ9NTI5 1447 aa12.46□□□□□ -0.41
TGIF1-213ENST00000549468 NESP48681 1621 aa12.4□□□□□ -0.42
TGIF1-213ENST00000549468 FANCD2Q9BXW9 1451 aa12.37□□□□□ -0.43
TGIF1-213ENST00000549468 ERCC6Q03468 1493 aa12.34□□□□□ -0.43
TGIF1-213ENST00000549468 CEP164Q9UPV0 1460 aa12.32□□□□□ -0.44
TGIF1-213ENST00000549468 ABCC8Q09428 1581 aa12.29□□□□□ -0.44
TGIF1-213ENST00000549468 WRNQ14191 1432 aaPredicted RBP eCLIP12.26□□□□□ -0.45
TGIF1-213ENST00000549468 MRC2Q9UBG0 1479 aa12.25□□□□□ -0.45
TGIF1-213ENST00000549468 PRDM2Q13029 1718 aa12.25□□□□□ -0.45
TGIF1-213ENST00000549468 TRIM41Q8WV44 630 aa12.23□□□□□ -0.45
TGIF1-213ENST00000549468 KIF21AQ7Z4S6 1674 aa12.18□□□□□ -0.46
TGIF1-213ENST00000549468 URB2Q14146 1524 aaKnown RBP12.17□□□□□ -0.46
TGIF1-213ENST00000549468 TOPBP1Q92547 1522 aa12.17□□□□□ -0.46
TGIF1-213ENST00000549468 DNMBPQ6XZF7 1577 aa12.17□□□□□ -0.46
TGIF1-213ENST00000549468 WDR62O43379 1518 aa12.16□□□□□ -0.46
TGIF1-213ENST00000549468 CUX1P39880 1505 aa12.15□□□□□ -0.46
TGIF1-213ENST00000549468 TOP2BQ02880 1626 aa12.13□□□□□ -0.47
TGIF1-213ENST00000549468 CUX2O14529 1486 aa12.13□□□□□ -0.47
TGIF1-213ENST00000549468 SOGA1O94964 1423 aa12.12□□□□□ -0.47
TGIF1-213ENST00000549468 THOC2Q8NI27 1593 aaKnown RBP12.12□□□□□ -0.47
TGIF1-213ENST00000549468 POLA1P09884 1462 aaPredicted RBP12.09□□□□□ -0.47
TGIF1-213ENST00000549468 FGD5Q6ZNL6 1462 aa12.09□□□□□ -0.47
TGIF1-213ENST00000549468 SYNJ1O43426 1573 aa12.09□□□□□ -0.47
TGIF1-213ENST00000549468 IFT140Q96RY7 1462 aa12.08□□□□□ -0.47
TGIF1-213ENST00000549468 BIVM-ERCC5R4GMW8 1640 aa12.08□□□□□ -0.48
TGIF1-213ENST00000549468 RAD54L2Q9Y4B4 1467 aa12.02□□□□□ -0.48
TGIF1-213ENST00000549468 ABCA10Q8WWZ4 1543 aa12.02□□□□□ -0.48
TGIF1-213ENST00000549468 KIF27Q86VH2 1401 aa12.02□□□□□ -0.49
TGIF1-213ENST00000549468 TDRD9Q8NDG6 1382 aaKnown RBP11.99□□□□□ -0.49
TGIF1-213ENST00000549468 EEA1Q15075 1411 aa11.99□□□□□ -0.49
TGIF1-213ENST00000549468 TARBP1Q13395 1621 aaKnown RBP11.97□□□□□ -0.49
TGIF1-213ENST00000549468 WDR97A6NE52 1622 aa11.97□□□□□ -0.49
TGIF1-213ENST00000549468 CSRNP3Q8WYN3 585 aa11.96□□□□□ -0.49
TGIF1-213ENST00000549468 AQRO60306 1485 aaKnown RBP eCLIP11.95□□□□□ -0.52e-7■■■■□ 23.3
TGIF1-213ENST00000549468 GAPVD1Q14C86 1478 aa11.95□□□□□ -0.5
TGIF1-213ENST00000549468 IGF1RP08069 1367 aa11.93□□□□□ -0.5
TGIF1-213ENST00000549468 ZNF608Q9ULD9 1512 aaPredicted RBP11.93□□□□□ -0.5
TGIF1-213ENST00000549468 GRIN2BQ13224 1484 aa11.93□□□□□ -0.5
TGIF1-213ENST00000549468 FAM9AQ8IZU1 332 aaPredicted RBP11.9□□□□□ -0.5
TGIF1-213ENST00000549468 ERICH3Q5RHP9 1530 aa11.88□□□□□ -0.51
TGIF1-213ENST00000549468 RUSC2Q8N2Y8 1516 aa11.87□□□□□ -0.51
TGIF1-213ENST00000549468 CARMIL1Q5VZK9 1371 aa11.87□□□□□ -0.51
TGIF1-213ENST00000549468 ABCA5Q8WWZ7 1642 aa11.86□□□□□ -0.51
TGIF1-213ENST00000549468 CHMP7Q8WUX9 453 aaPredicted RBP11.86□□□□□ -0.51
TGIF1-213ENST00000549468 MAGI1Q96QZ7 1491 aaPredicted RBP11.85□□□□□ -0.51
TGIF1-213ENST00000549468 FHAD1B1AJZ9 1412 aa11.85□□□□□ -0.51
TGIF1-213ENST00000549468 EIF4G3O43432 1585 aaKnown RBP11.84□□□□□ -0.51
TGIF1-213ENST00000549468 FBLN2P98095 1184 aa11.82□□□□□ -0.52
TGIF1-213ENST00000549468 SNAPC4Q5SXM2 1469 aa11.81□□□□□ -0.52
TGIF1-213ENST00000549468 PRXQ9BXM0 1461 aa11.81□□□□□ -0.52
TGIF1-213ENST00000549468 SYNJ2O15056 1496 aa11.8□□□□□ -0.52
TGIF1-213ENST00000549468 RAPGEF2Q9Y4G8 1499 aa11.8□□□□□ -0.52
TGIF1-213ENST00000549468 SENP3Q9H4L4 574 aaPredicted RBP11.79□□□□□ -0.52
TGIF1-213ENST00000549468 CUL7Q14999 1698 aa11.78□□□□□ -0.52
TGIF1-213ENST00000549468 OSCARQ8IYS5 282 aa11.77□□□□□ -0.53
TGIF1-213ENST00000549468 UBTFP17480 764 aaKnown RBP11.76□□□□□ -0.53
TGIF1-213ENST00000549468 PBRM1Q86U86 1689 aa11.75□□□□□ -0.53
TGIF1-213ENST00000549468 ADAMTS12P58397 1594 aa11.73□□□□□ -0.53
TGIF1-213ENST00000549468 GOLGA3Q08378 1498 aa11.73□□□□□ -0.53
TGIF1-213ENST00000549468 GRIN2AQ12879 1464 aa11.73□□□□□ -0.53
TGIF1-213ENST00000549468 KIF21BO75037 1637 aa11.71□□□□□ -0.53
TGIF1-213ENST00000549468 LOC105371045A0A1W2PR82 267 aa11.69□□□□□ -0.54
TGIF1-213ENST00000549468 NUP160Q12769 1436 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms